Naga_100087g2, gene4788 (gene) Nannochloropsis gaditana

Overview
NameNaga_100087g2
Unique Namegene4788
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:768689..772463 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100087g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:768689..772463 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL010ngnoL010Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03220NO12G03220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4960rna4960-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4959rna4959-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4960rna4960Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4959rna4959Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4960

>rna4960-protein ID=rna4960-protein|Name=rna4960|organism=Nannochloropsis gaditana|type=polypeptide|length=756bp
MTTDGALDEQSYLMAMKEEIESALDAAPGGNNDINTPGDKLSPPALQDCD
IAISKTKPQTAAVGIDLLMRNSAQDIHPDPVSNSKGFEDRISGRTDDCAG
GIHSNTSSSSSAPPSEASTSVSAWVGQEDSTGSSTSSSRQGGEDHGSSNV
TASTTSIGASTTSSQAAERRRARARKMGLLQNRGEMLLSSSQRHLQEHPY
QIKEDDGDREGLAGLACDSPPGSCSSSVTGMVTSRMRRDAEDMAAAVALT
KKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYEG
VDTLESARDAGGDIVRGTGATPAGLTWQQQQEQRIMEAQQQAGAADSQDP
NPFLEESDLDGFYQPLAGMLGFDPSSLNISLPSSLPPSSARQSRPTPSSG
APPQTEAGRIGGSKGPGDQSGGRKGPFTAESPTPTYARLSASEIGFAQRP
QLSMVSSPAQSQEPEQRLRGQQLQQQHQLALEQQRQQQQQVQKTSIWEPA
ALMPLMDSTSDFYFGEGVEGVKFGSEQGVQGASAPGLVSKEQNKDPVEEE
AEYSRLPEQGMDASDPGFARGRGQRKSPPDQIATGPASTSSLEGDRRPRQ
CTSKTDRKRGRATATAGRDGNADGGARQASRTRPGSSEVEHLDSEVWEFP
EYAPVETGGSLSLGRGGEGGRGEGGSLISMRLGMVRPGAGGAAYPQELPL
ERDGTEAGALERGPEEGAGVRRRGENLRVWEREGGGREEGAEGASLGPSW
STQSPW
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protein sequence of rna4959

>rna4959-protein ID=rna4959-protein|Name=rna4959|organism=Nannochloropsis gaditana|type=polypeptide|length=626bp
MTTDGALDEQSYLMAMKEEIESALDAAPGGNNDINTPGDKLSPPALQDCD
IAISKTKPQTAAVGIDLLMRNSAQDIHPDPVSNSKGFEDRISGRTDDCAG
GIHSNTSSSSSAPPSEASTSVSAWVGQEDSTGSSTSSSRQGGEDHGSSNV
TASTTSIGASTTSSQAAERRRARARKMGLLQNRGEMLLSSSQRHLQEHPY
QIKEDDGDREGLAGLACDSPPGSCSSSVTGMVTSRMRRDAEDMAAAVALT
KKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYEG
VDTLESARDAGGDIVRGTGATPAGLTWQQQQEQRIMEAQQQAGAADSQDP
NPFLEESDLDGFYQPLAGMLGFDPSSLNISLPSSLPPSSARQSRPTPSSG
APPQTEAGRIGGSKGPGDQSGGRKGPFTAESPTPTYARLSASEIGFAQRP
QLSMVSSPAQSQEPEQRLRGQQLQQQHQLALEQQRQQQQQVQKTSIWEPA
ALMPLMDSTSDFYFGEGVEGVKFGSEQGVQGASAPGLVSKEQNKDPVEEE
AEYSRLPEQGMDASDPGFARGRGQRKSPPDQIATGPASTSSLEGDRRPPG
NLDQLFGNILVDYVNGGCWLMTVIVI
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Synonyms
Publications