Naga_100616g2, gene2203 (gene) Nannochloropsis gaditana

Overview
NameNaga_100616g2
Unique Namegene2203
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:77621..80094 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100616g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:77621..80094 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL119ngnoL119Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00190NO05G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2308rna2308-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2307rna2307-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2308rna2308Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2307rna2307Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2308

>rna2308-protein ID=rna2308-protein|Name=rna2308|organism=Nannochloropsis gaditana|type=polypeptide|length=450bp
MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQ
RGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYC
SRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLE
GHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVA
MAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMG
ELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNL
LYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVA
SGIPFLLTMYDAEEGRKTLEMLESFDACVAWGPDLNPMRSLVLEETEAPA
LQRYARLVADGRMDAGADEPDGPLPPLELTLCNRTTGDSRYWVGVKGTRG
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protein sequence of rna2307

>rna2307-protein ID=rna2307-protein|Name=rna2307|organism=Nannochloropsis gaditana|type=polypeptide|length=506bp
MATQVNTTQDSENSTVITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQ
RGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYC
SRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLE
GHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVA
MAAKRFGLLGGRGGREGHGGDHGRHRRPFRLHILGATETQEIQRLPLSMG
ELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLAEGKETARDITVWKSNL
LYHNWVLSHEGSKEAPPDLVVALNSGLHTGGEIWRGGGGRKVEGKRQKKH
SEWWRLSLSQPPPTAMPPVLDIISPMHSALSFFSVQRHASLRVFPSVVTP
PGLRRRSSPRGRLHVATHPYLPGRVRDPISAYHVRRGGREEDPGDAGVVR
RVRCMGPRLEPHAVAGLGGNGGTGLATVRPPGRGWAHGRRGRRAGRSIAT
LGIDVV
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Synonyms
Publications