NO05G00190, NO05G00190 (gene) Nannochloropsis oceanica

Overview
NameNO05G00190
Unique NameNO05G00190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2647
Alignment locationchr5:86318..88964 -

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger mynd domain-containing protein 17
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:86318..88964 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Homology
BLAST of NO05G00190 vs. NCBI_GenBank
Match: EWM28375.1 (zinc finger mynd domain-containing protein 17 [Nannochloropsis gaditana])

HSP 1 Score: 523.5 bits (1347), Expect = 6.700e-145
Identity = 256/446 (57.40%), Postives = 328/446 (73.54%), Query Frame = 0
Query:    1 MLTDEEAWQTLAPFLSLGVLKTRQVASMLKAPLARRGDLYQMLIAEAYQTREAMRRICAECGKREGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYEEQWLNKYLVGLHRESIMTWPEGHIPEGWTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLL----GREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHDWVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETEPPALQRYAKMVMNGVMAAGEEEPEDRELAKLDLSLCNRTAGNSRFWIGVQGEK 443
            ++TDE+AWQ  +PFL++G++K  ++ ++LKAPL +RG+  Q+L  E  Q REAMRRICAECG+REG++G+ KLK CGKCANIWYCSRDCQLANFHSG HK+ACT+LKIARICREN+  R++ +E W+  YL+GL   + + WPEG IPEGW+ FF  R +  Q SAN++SGM LSE+LHEGLT+A+AAK+FGLL                      H+LGATET+E +RL L+MGEL  LL P+Y+EGLEVS+FGPQ+ + T FRV L   EG          +TV KSNLLYH+WVL H G     PDLVVA NSG +TG+DH  +DGSMWLPTL Y++ + +P LLTMYDA EG+KT+++L     E F A + WGP+LNPMRSLVLEETE PALQRYA++V +G M AG +EP D  L  L+L+LCNRT G+SR+W+GV+G +
Sbjct:   16 VITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLXXXXXXXXXXXXXXXXXXXXXXHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLA--EG----KETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGDDHHHVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEML-----ESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEP-DGPLPPLELTLCNRTTGDSRYWVGVKGTR 449          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: EWM28376.1 (zinc finger mynd domain-containing protein 17 [Nannochloropsis gaditana])

HSP 1 Score: 369.8 bits (948), Expect = 1.200e-98
Identity = 182/323 (56.35%), Postives = 232/323 (71.83%), Query Frame = 0
Query:    1 MLTDEEAWQTLAPFLSLGVLKTRQVASMLKAPLARRGDLYQMLIAEAYQTREAMRRICAECGKREGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYEEQWLNKYLVGLHRESIMTWPEGHIPEGWTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLL----GREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHDWVLRHGGGTAPKPDLVVAFNSGAYTGND 320
            ++TDE+AWQ  +PFL++G++K  ++ ++LKAPL +RG+  Q+L  E  Q REAMRRICAECG+REG++G+ KLK CGKCANIWYCSRDCQLANFHSG HK+ACT+LKIARICREN+  R++ +E W+  YL+GL   + + WPEG IPEGW+ FF  R +  Q SAN++SGM LSE+LHEGLT+A+AAK+FGLL                      H+LGATET+E +RL L+MGEL  LL P+Y+EGLEVS+FGPQ+ + T FRV L   EG          +TV KSNLLYH+WVL H G     PDLVVA NSG +TG +
Sbjct:   16 VITDEQAWQYFSPFLTVGLVKAHELHALLKAPLRQRGERLQLLFDETIQKREAMRRICAECGRREGDKGVDKLKVCGKCANIWYCSRDCQLANFHSGEHKKACTSLKIARICRENQMKRAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLXXXXXXXXXXXXXXXXXXXXXXHILGATETQEIQRLPLSMGELGALLCPFYFEGLEVSVFGPQVMTPTAFRVSLA--EG----KETARDITVWKSNLLYHNWVLSHEGSKEAPPDLVVALNSGLHTGGE 332          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_005854153.1 (hypothetical protein NGA_0166400 [Nannochloropsis gaditana CCMP526] >EKU22205.1 hypothetical protein NGA_0166400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 276.9 bits (707), Expect = 1.100e-70
Identity = 163/399 (40.85%), Postives = 209/399 (52.38%), Query Frame = 0
Query:  119 RSQYEEQWLNKYLVGLHRESIMTWPEGHIPEGWTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLL----GREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYE----------------------------------------GLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHDWVLRHGGGTAPKPDLVVAFNSGAYTGND--------------------------------------------HQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETEPPALQRYAKMVMNGVMAAGEEEPEDRELAKLDLSLCNRTA 430
            R++ +E W+  YL+GL   + + WPEG IPEGW+ FF  R +  Q SAN++SGM LSE+LHEGLT+A+AAK+FGLL                      H+LGATET+E +RL L+MGEL  LL P+Y+E                                        GLEVS+FGPQ+ + T FRV L   EG          +TV KSNLLYHDWVL H G     PDLVVA NSG +TG +                                               +DGSMWLPTL Y++ + +P LLTMYDA EG+KT+++L     E F A + WGP+LNPMRSLVLEETE PALQRYA++V +G M AG +EP+      + +   +R A
Sbjct:    3 RAEMKEDWIRTYLMGLEGHTKIQWPEGQIPEGWSEFFAARQLGHQVSANSNSGMCLSELLHEGLTVAMAAKRFGLLXXXXXXXXXXXXXXXXXXXXXXHILGATETQEIQRLPLSMGELGALLCPFYFEGKPPPLPSGAGRINYRHASSRLTVVSPSFLPSLPPSSTPKGLEVSVFGPQVMTPTAFRVSLA--EG----KETARDITVWKSNLLYHDWVLSHEGSKEAPPDLVVALNSGLHTGGEIWRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGSMWLPTLTYLVASGIPFLLTMYDAEEGRKTLEML-----ESFDACVAWGPDLNPMRSLVLEETEAPALQRYARLVADGRMDAGADEPDGNSNVHVTILPTSRVA 390          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_023674992.1 (putative protein MSS51 homolog, mitochondrial isoform X1 [Paramormyrops kingsleyae])

HSP 1 Score: 110.9 bits (276), Expect = 1.000e-20
Identity = 112/395 (28.35%), Postives = 168/395 (42.53%), Query Frame = 0
Query:   46 EAYQTREAMRRICAECGKREGEQGMGK-LKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGI--------------RSQYE----EQWLN-KYLVGLHRESIMTWPEGHIPEGWTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHD-WVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETE-----PPALQRYAKMVMNGVMAAGEEEPED 415
            E +Q  E   + CA C K   +    K LK+C KC N++YCS++CQ  ++    HK +C  L++A I R  E +              R   E    E WL+ +  +    E+I++ P  H+ E WT    TR   +      S     SE L + LT+ L  + FGL          +   RP  +H++GA+  E          EL + ++P  ++GLEV + GP++      R PL+ F            V +     LYH  W        A KPDLVV F+ G + G+   E DG  WLPTL  +    +P L TM +  E K ++ +L            I G   NP  SL  E+ +      P       +   G++   +EE E+
Sbjct:   25 EMFQKMEETFKFCACCRKLPSDLSDAKSLKRCVKCLNVYYCSKECQKEDWPK--HKASCKQLRLAAIDRLVEWLVFKGDLPFSTEQWSRPAAEVKNWEDWLSMQGDLNSRLEAILSGP--HMQELWTNVSRTR--PEDGELRESLWRVTSEFLSKPLTLGLGLRFFGL----------DPYSRPLTIHLVGASHNETMGARLTDFDELSR-MFP-GHQGLEVVMVGPEVVEGPIMRPPLRAF-------GPRGRVYISAYKGLYHQFWEELVQKQEAAKPDLVVGFHPG-FDGSQTME-DG--WLPTLLLLRDYDIPSLFTMLNEEELKYSLQILTELEMH------IRGTGANPFASLKPEQVQACPNKTPVFCNAHYLYFQGLLEQDDEELEE 384          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_023674991.1 (putative protein MSS51 homolog, mitochondrial [Paramormyrops kingsleyae])

HSP 1 Score: 110.9 bits (276), Expect = 1.000e-20
Identity = 114/429 (26.57%), Postives = 171/429 (39.86%), Query Frame = 0
Query:   17 LGVLKTRQVASMLKAPLARRGDLYQMLIAEAYQTREAMRRICAECGKREGEQGMGK-LKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYE-----EQW-------------------LNKYLVGLHRESIMTWPEGHIPEGWTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHD-WVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETE-----PPALQRYAKMVMNGVMAAGEEEPED 415
            L  LK +  +    A   ++  L      E +Q  E   + C  C +       G+ LK+CGKC N++YCS++CQ  ++    HK+ C  L++  I R  E +    +     EQW                   LN  L     E+I + P  H+ E WT    TR   +      S     SE L + LT+ L  + FGL          +   RP  +H++GA+  E          EL + ++P  ++GLEV + GP++      R PL+ F            V +     LYH  W        A KPDLVV F+ G +         G  WLPTL  +    LP L TM++  E K ++ +L            I G   NP  SL  E+ +      P       +   G++   +EE E+
Sbjct:   41 LNKLKMKDYSEYRAALEGKKKSLTFHSYKEMFQNMEETFKFCTGCSRLPSHLSDGQALKRCGKCLNVYYCSKECQKEDWPK--HKKVCKLLRLVAIDRLVEWLLFMGDLPFSTEQWSRPAAEVKNWEDWLSMQGDLNPSL-----EAIFSGP--HMQELWTNVSRTR--PEDGELRESLWRVTSEFLSKPLTLGLGLRFFGL----------DPYSRPLTIHLVGASHNETMGARLTDFDELSR-MFP-GHQGLEVVMVGPEVVEGPIMRPPLRAF-------GPRGRVYISAYKGLYHQFWEELVQKQEAAKPDLVVGFHPGFHATQGL----GEGWLPTLLLLRDYNLPSLFTMFNEEELKYSLQILTELEMH------IRGTGANPFASLKPEQVQACPNKTPVFCNAHYLYFQGLLEQDDEELEE 429          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_012692567.1 (PREDICTED: putative protein MSS51 homolog, mitochondrial isoform X1 [Clupea harengus])

HSP 1 Score: 108.6 bits (270), Expect = 5.100e-20
Identity = 108/393 (27.48%), Postives = 163/393 (41.48%), Query Frame = 0
Query:   46 EAYQTREAMRRICAECGKREGEQGMGK-LKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYE-----EQW------LNKYLVGLHRESIMTWPEGHIPEG--WTAFFET--RGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHDW---VLRHGGGTAPKPDLVVAFNSGAYTGN---DHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETE-----PPALQRYAKMVMNGVMAAGEEE 412
            E ++  E   R+CA C ++  +    K LK+CGKC N++YC RDCQ    H   HK+ C  L+ A I R  E +  + +     + W      +N +   L  +  +      I  G   T  +++  R   ++A    S     SE LH  LTI +A K F L          +   +   +HV GA  +E  +     M EL   ++P  ++G+EV + GP++      R PL  F              +     LYH +   VL  G G   KPDLVV FN G        D +E     WLPTL  +    +P L T  D  E + T+ +L    +    A ++     NP RS   E+ +     PP       +   G++   EE+
Sbjct:   23 EMFEKIEETFRVCATCDRKPAQLPDPKALKRCGKCVNVYYCCRDCQ--KQHWPQHKKLCNTLRCAAIDRRVEWLIYKGDLPFPTDAWTRPAAEVNSWEDWLSMQGDLASRVDPILSGKYMTVLWKSVNRPRPEEADLRESVWRLCSEFLHRPLTIGMAIKFFNL----------DPYSQSLTIHVAGAAHSETLQARVTDMDEL-SHMFP-GHQGMEVVMVGPEVVEGKAMRPPLTAF-------GPRGKTYISGYKGLYHQFWEHVLEKGEGA--KPDLVVGFNPGVDASEENMDQEEKVDQTWLPTLLLLRDFNIPTLFTTTDEPELEYTLQIL-LELEMHIKATVV-----NPFRSQKPEQVQASPNKPPIYCSAHYICFQGLLEREEED 386          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_020369992.1 (putative protein MSS51 homolog, mitochondrial [Rhincodon typus])

HSP 1 Score: 106.3 bits (264), Expect = 2.500e-19
Identity = 104/372 (27.96%), Postives = 153/372 (41.13%), Query Frame = 0
Query:   46 EAYQTREAMRRICAECGK-REGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYEEQWLNKYLVGLHRESIMTWPEG-HIPEGWTAFF-----------------------ETRGISQQASAN--NSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYH-DWVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETE 390
            E +Q  E   + CAEC K  EG      L++C +C N++YC  DCQ A++   VHK+ C  LK A I R  E         WL     G      + W +     +GW A+F                       E  G  Q        S     ++     +TI LA  +FG+          +  ++P  +HV+GA+ TE          EL + ++P   +G+EV + GP++ +  T R PL+ + G          V +     LYH  W      G A +P LVV F+ G +      E     WLPTL  +    +P L TMY   E K ++++LQ           I G  +NP  SL LE+ +
Sbjct:  106 EMFQKMEDTFKFCAECKKLPEGLADPRALRRCKRCQNVYYCGTDCQRASW--PVHKKLCKKLKWAAIDRLVE---------WL--VFTGDIPFPSLNWTQAVSEVKGWDAWFLMQEDLDTKLSTILNCKYMKILWENAGRPQPEDEELLESIKRVTTDFQARPVTIGLALHRFGI----------DPCEKPITIHVVGASHTETLNARCTDYDELAR-MFP-DNDGIEVVMIGPEVVAGPTLRPPLESYAG-------RRRVYLSGWKGLYHMYWETMVEPGRAARPSLVVGFHPGFHVSQGLAE----GWLPTLLLLRDYNIPSLFTMYSDQELKYSLEILQE------LETRIIGYGVNPFASLKLEQVQ 435          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_003201406.1 (putative protein MSS51 homolog, mitochondrial [Danio rerio])

HSP 1 Score: 103.6 bits (257), Expect = 1.700e-18
Identity = 92/331 (27.79%), Postives = 143/331 (43.20%), Query Frame = 0
Query:   46 EAYQTREAMRRICAECGKREGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGI--------------RSQYEEQWLNKYL-----VGLHRESIMTWPEGHIPEGWTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHD-WVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTV 357
            E ++  E   +ICA+C +R   Q  G LK+C +C N++YCS++CQ  N+    HK  C  L++A + R  E +              R   +    N +L     +    E I++    ++ + WT     R    +A    S     SE L   LTI +  + F L          +   RP  +HV+GA + E        + EL   ++P  ++GLEV + GP++      R PL+ F            V +     LYH+ W  +   G A KPDLVV F    + G + QE+    W PTL  +    +P L+TM    E + T+
Sbjct:   23 EMFEKMEESFKICAQC-ERLPSQVKGSLKRCTRCLNVYYCSKECQKKNWPQ--HKHYCNKLRMAAVDRCVEWLIYKGDLPFPTKAWSRPANKVSGWNDWLSMQGDLTARLEPILSGQ--NMADLWTNGCRPR--PDEAELRESVWRVCSEFLSRPLTIGMGIRMFNL----------DPYSRPLTVHVVGAAQNETLGARTTDLDEL-SHMFP-GHQGLEVVMVGPEVVQGPIMRPPLRAF-------GPRGRVYISAYKGLYHEFWEEKVEKGEAAKPDLVVGF----HPGFEGQEVSQD-WFPTLLLLRDYNIPTLITMISEAERQSTL 322          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_016095310.1 (PREDICTED: putative protein MSS51 homolog, mitochondrial [Sinocyclocheilus grahami])

HSP 1 Score: 101.3 bits (251), Expect = 8.200e-18
Identity = 89/330 (26.97%), Postives = 141/330 (42.73%), Query Frame = 0
Query:   46 EAYQTREAMRRICAECGKREGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYEEQWLNKYLVGLHRESIMTWPEGHIPEG------------------WTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHD-WVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTV 357
            E ++  E   +ICA+C +R   Q  G LK+C +C N++YCS++CQ  ++    HK  C  L++A + R  E +  + +  +L +         +  W +    +G                  WT     R   ++A   +S     SE L   LTI +  + F L          +   RP  +HV+GA   E        M EL + ++P  ++GLEV + GP++      R PL+ F            V +     LYH  W      G A KPDLV+ F    + G + QE++   WL TL  +    +P L TM +  E + T+
Sbjct:   22 EMFEKMEESFKICAQC-ERLPSQATGSLKRCTRCLNVYYCSKECQKKDWPQ--HKLYCDKLRMAAVDRHVEWLVYKGDLPFLTE-AWSRPANKVSCWKDWLSMQGDLTPRLEPILSGQNMTDLWTNACRPR--PREAELRDSVWRVCSEFLSRPLTIGMGVRMFNL----------DPYLRPLTIHVVGAANNETLGARTTDMDELSR-MFP-GHQGLEVVMVGPEVVQGPIMRPPLRAF-------GPRGKVYISAYKGLYHQFWEEAVEKGEAAKPDLVLGF----HPGFEEQEVNQD-WLATLLLLRDYNIPTLFTMINNEELQSTL 321          
BLAST of NO05G00190 vs. NCBI_GenBank
Match: XP_024140254.1 (putative protein MSS51 homolog, mitochondrial [Oryzias melastigma] >XP_024140255.1 putative protein MSS51 homolog, mitochondrial [Oryzias melastigma])

HSP 1 Score: 100.9 bits (250), Expect = 1.100e-17
Identity = 89/337 (26.41%), Postives = 139/337 (41.25%), Query Frame = 0
Query:   46 EAYQTREAMRRICAECGK-REGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHKQACTALKIARICRENEGIRSQYE-----EQWLNKYLVGLHRESIMTWPEGHIPEG-WTAFFET---------------RGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGKEGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLFGPQLTSLTTFRVPLKGFEGXXXXXXXXXXVTVEKSNLLYHD-WVLRHGGGTAPKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDALEGKKTVDVL 360
            E +Q  E   + C  C K  E       LK+C KC N++YCS+DCQ  ++    HK+AC  L++  I R  E +    +     E+W            + +W +    +G  TA   T               R    +A    S     SE L   LT+ +A ++FGL          +   +P  +H+ GA+   E     LT  +    ++P  ++G+E+ + GP++      R PL+ F            V +     LYH  W        A KPDLVV F+ G +      E     WLPTL  +    +P L TMY  +E + ++++L
Sbjct:   70 EMFQKMEDTFKFCTGCNKLPEHLSEQQSLKRCVKCLNVYYCSKDCQRKDWPQ--HKKACKTLRLVAIDRLVEWLMFTGDLPFPTEKWTKS------PHEVKSWDDWIPMQGNLTAHLNTIVSGTNMATLWKNAVRPKPDEADLRGSLWRIQSEFLSRVLTVGMAIRRFGL----------DPYAKPLTIHLAGASH-NETMGARLTDYDELNNMFP-KHQGIEIVMVGPEVVDGPIMRPPLRAF-------GPRERVYISAFKGLYHQFWEALEEKEEAAKPDLVVGFHPGFHANQGLLE----GWLPTLLLLRDYNIPSLFTMYSEMELRSSLEIL 375          
The following BLAST results are available for this feature:
BLAST of NO05G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28375.16.700e-14557.40zinc finger mynd domain-containing protein 17 [Nan... [more]
EWM28376.11.200e-9856.35zinc finger mynd domain-containing protein 17 [Nan... [more]
XP_005854153.11.100e-7040.85hypothetical protein NGA_0166400 [Nannochloropsis ... [more]
XP_023674992.11.000e-2028.35putative protein MSS51 homolog, mitochondrial isof... [more]
XP_023674991.11.000e-2026.57putative protein MSS51 homolog, mitochondrial [Par... [more]
XP_012692567.15.100e-2027.48PREDICTED: putative protein MSS51 homolog, mitocho... [more]
XP_020369992.12.500e-1927.96putative protein MSS51 homolog, mitochondrial [Rhi... [more]
XP_003201406.11.700e-1827.79putative protein MSS51 homolog, mitochondrial [Dan... [more]
XP_016095310.18.200e-1826.97PREDICTED: putative protein MSS51 homolog, mitocho... [more]
XP_024140254.11.100e-1726.41putative protein MSS51 homolog, mitochondrial [Ory... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR096ncniR096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003876NSK003876Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00190.1NO05G00190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|408668gene_10748Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100616g2gene2203Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00190.1NO05G00190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00190 ID=NO05G00190|Name=NO05G00190|organism=Nannochloropsis oceanica|type=gene|length=2647bp
CTTCAATCTCGCTTTTTTGTGCTTTTACGCCTTCAGTGCATTCCTTCAGT
GGTAAATCTCTCATCATAATGCCCGCCTTTGAACTATCATTCCCTGTGCG
CCACACATTTATAACTTCCCTTCCTCGAGGAAATTACGTTATCTGTGCAC
CAGTCAGACATGTCGACGGTTCGGACTAGCTCACCATACACAACATACTA
GTGGGGCGAATAAGTCATGTTGGGATGCCCGAAGATCTTGATCCATATTC
TATTACAGATTGTAGCCTTCTGGCCTTTGGAAAGCCGGGCTGGATGTCTG
CGGGGTGTGTCAGATGAGACTTCTAAAACCCCATTAAATAGCCTATTTAA
GGGTTTTGGGGAGAGTTGAACACACCCCCTAATGTGCTGTTGGGTTGGCG
AGCGACAGCGAGTTATCCCAGGCGATGTCCGCTTGACTTAAGGGCAGTCT
TCATGCCTCATATCTGTGAGTGTGTGTCTCAGTGTGTGGAATAGTTTGGC
AGGGTACAGGCGCAATGTGGAGACAAAGACAGAGCGCCAGGAGACATACG
TCCCCCAGCTCGATAACTCTCGCCGGTGTGTGTCTCTCTCTGGGACCATA
AAAAAATCTTCAACCCCTCTCCTCTCCACCCACCCACCACCACGGACTAG
GGACAGATGTTGACGGACGAGGAGGCATGGCAAACATTGGCCCCGTTTCT
GAGTTTGGGCGTATTAAAGACGCGACAAGTGGCATCCATGCTCAAGGCCC
CCCTTGCCCGGCGCGGGGACCTTTATCAGATGCTGATTGCCGAAGCCTAC
CAGACGCGAGAAGCAATGCGGCGGATTTGTGCTGAGTGTGGAAAACGAGA
AGGAGAGCAGGGCATGGGAAAACTCAAGCAATGCGGGAAATGTGCCAACA
TCTGgtaaggcgagcgtgctggagggaaagagggggagagcaaataaggg
atgatgtcagggagtgaacatagggatttattgcattgataaaaaagccc
ttttgaaagcatgccctcctccgtatacacataggttatagttatagtta
tttcctttctgtatgcttatttcctgactgtacctttgactctccttctt
ccctccctccctccctccctccctcctcttcctcccacaagGTATTGTTC
CCGCGACTGTCAACTTGCCAACTTCCACTCCGGCGTCCACAAACAAGCCT
GTACTGCCCTCAAAATCGCGCGGATCTGCCGTGAAAATGAGGGAATCCGC
TCACAATACGAGGAGCAATGGTTGAACAAATATCTGGTCGGTCTGCACCG
AGAGTCGATCATGACTTGGCCTGAGGGACATATCCCGGAGGGATGGACGG
CCTTCTTCGAGACGCGGGGCATCTCACAGCAGGCGAGCGCGAACAATAGC
AGTGGCATGGCCTTGAGTGAGGTGTTACACGAGGGCCTGACCATTGCCTT
GGCGGCGAAAAAGTTCGGCTTGCTGGGCAGGGAGGGAGGGAAGGAGGGAT
GGGAGACGAAAAAGCGGCCATTTCGACTGCATGTGTTGGGGGCGACGGAG
ACGGAGGAGGCGCGGCGCCTGCATTTGACCATGGGAGAGCTCTATAAGCT
GCTGTATCCCTACTACTATGAAGgcaagtctcctctttctgccttctctc
tctccttccctccttccctccttccctccctccctcacattttcccctcc
ccttcaatattttcctcaacctcctatcccactcccttccaatgatatgt
ccatggtctgaccgccctcactcaaagcttcctccctcccttttcagGAT
TGGAGGTCTCTCTCTTCGGTCCCCAGCTCACGTCCCTCACCACTTTCCGC
GTGCCTCTTAAAGGGTTCGAGGGTGGGAAGGAGGGCGGGGAGGAAGGCGG
GAGGGTGACCGTGGAGAAGAGCAATTTGCTGTACCATGATTGGGTGCTGC
GGCATGGAGGAGGGACGGCGCCTAAGCCTGATTTGGTGGTGGCGTTCAAC
AGTGGAGCGTATACTGgtgggaaggagggcggggagggagggaaggagag
ggggaggaatggaaggatgaaggctgggagggatgtgggaatgatgtagt
ctgcctggttgagtttgtctctcctttctttgcatgggaaagtttatgac
attctcagaagtgtcgtaattcctcatttacttgtccccgcctccttttc
cctctttctttaccgtccctctttcaagGGAACGACCACCAGGAAATCGA
CGGCTCCATGTGGTTGCCTACCCTCGCCTACATCATAAAAGCCCGCCTCC
CCTTACTTTTGACCATGTATGATGCCCTCGAAGGGAAGAAGACAGTGGAT
GTCCTTCAAGCTAATTACAAAGAGGACTTCTGCGCCAACATTATCTGGGG
GCCTGAGCTTAATCCGATGCGTTCCTTGGTGTTGGAGGAGACAGAACCGC
CTGCCTTGCAGCGATATGCCAAGATGGTCATGAATGGCGTGATGGCGGCG
GGGGAGGAGGAACCAGAAGACAGAGAACTAGCGAAGTTGGACTTGTCACT
ATGTAATCGCACGGCCGGCAACTCGCGGTTTTGGATTGGAGTGCAGGGGG
AAAAGGATAAGGAGGGGGGGGGAAAAGGGAAGGGGGGGGGAAAGTGA
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protein sequence of NO05G00190.1

>NO05G00190.1-protein ID=NO05G00190.1-protein|Name=NO05G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=456bp
MLTDEEAWQTLAPFLSLGVLKTRQVASMLKAPLARRGDLYQMLIAEAYQT
REAMRRICAECGKREGEQGMGKLKQCGKCANIWYCSRDCQLANFHSGVHK
QACTALKIARICRENEGIRSQYEEQWLNKYLVGLHRESIMTWPEGHIPEG
WTAFFETRGISQQASANNSSGMALSEVLHEGLTIALAAKKFGLLGREGGK
EGWETKKRPFRLHVLGATETEEARRLHLTMGELYKLLYPYYYEGLEVSLF
GPQLTSLTTFRVPLKGFEGGKEGGEEGGRVTVEKSNLLYHDWVLRHGGGT
APKPDLVVAFNSGAYTGNDHQEIDGSMWLPTLAYIIKARLPLLLTMYDAL
EGKKTVDVLQANYKEDFCANIIWGPELNPMRSLVLEETEPPALQRYAKMV
MNGVMAAGEEEPEDRELAKLDLSLCNRTAGNSRFWIGVQGEKDKEGGGKG
KGGGK*
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Synonyms
Publications