SNR13, gene1815 (gene) Nannochloropsis gaditana

Overview
NameSNR13
Unique Namegene1815
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:423175..427272 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g121
Gene biotypeprotein_coding
GeneSNR13
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:423175..427272 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03900NO04G03900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1899rna1899-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1900rna1900-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1899rna1899Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1900rna1900Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1899

>rna1899-protein ID=rna1899-protein|Name=rna1899|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MREVMSNFREQEEEQREFLLHRPPQDRTSLSPPHGRSIAMTDIFESYEDE
FRALAGDCQKKLSNLLTYETHGDKIQSLLRQASPQVTQLEGLIKQMKLEV
RSLDAGTKAALSAKVQTYERVLTGVKADLGRAREREEKDALLGAGGGVSM
VQRQRLLETSERLAHQNRTIDNARKVMAETEQVGIHIGEELESNREKIQS
IRGKVSEVGGLTNTARRLISSISRRETQQKLMLWGVAASLLIAIILIIYY
SSR
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protein sequence of rna1900

>rna1900-protein ID=rna1900-protein|Name=rna1900|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MREVMSNFREQEEEQREFLLHRPPQDRTSLSPPHGRSIAMTDIFESYEDE
FRALAGDCQKKLSNLLTYETHGDKIQSLLRQASPQVTQLEGLIKQMKLEV
RSLDAGTKAALSAKVQTYERVLTGVKADLGRAREREEKDALLGAGGGVSM
VQRQRLLETSERLAHQNRTIDNARKVMAETEQVGIHIGEELESNREKIQS
IRGKVGEGQGMTEHARKLVKEMTSRWF
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Synonyms
Publications