Naga_100006g79, gene1048 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g79
Unique Namegene1048
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1155422..1157188 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g79
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1155422..1157188 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01400NO03G01400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1087rna1087-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1088rna1088-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1087rna1087Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1088rna1088Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1087

>rna1087-protein ID=rna1087-protein|Name=rna1087|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
MIRCRKYLSIPSPSAPSLRHISQRSMTTRTRAKANVGNDVTPAKEGVATR
QRRQASDSSGPPSQTSLPPIKKAVKRTSNVDQSDDDDDKPVEIQSRAIRD
GERGNHSRPSGLNTRVKKRPRKVKERENKYWAEKGGHEGAGQGRPVHEDE
GDVQGLSAPNHAATEANEDGQKNVEEANRLVDPSSGDEPLPATFWEAVQR
AKEAEQQQRINEALRRVETKRCV
back to top

protein sequence of rna1088

>rna1088-protein ID=rna1088-protein|Name=rna1088|organism=Nannochloropsis gaditana|type=polypeptide|length=294bp
MTTRTRAKANVGNDVTPAKEGVATRQRRQASDSSGPPSQTSLPPIKKAVK
RTSNVDQSDDDDDKPVEIQSRAIRDGERGNHSRPSGLNTRVKKRPRKVKE
RENKYWAEKGGHEGAGQGRPVHEDEGDVQGLSAPNHAATEANEDGQKNVE
EANRLVDPSSGDEPLPATFWEAVQRAKEAEQQQRINEALRRVETKRGKTS
EGEQTRFKKIVKIPRVSGNIQVVPLNELTEEVDGRTDVPSEVLAFAQSLG
ASTGLATSRKRVPFVAFARAKPSTVRSKSTHKAAPRARAGENPI
back to top
Synonyms
Publications