NO03G01400, NO03G01400 (gene) Nannochloropsis oceanica

Overview
NameNO03G01400
Unique NameNO03G01400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1430
Alignment locationchr3:434017..435446 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:434017..435446 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005767NSK005767Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100006g79gene1048Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01400.5NO03G01400.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G01400.4NO03G01400.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G01400.3NO03G01400.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G01400.2NO03G01400.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G01400.1NO03G01400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01400.5NO03G01400.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G01400.4NO03G01400.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G01400.3NO03G01400.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G01400.2NO03G01400.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G01400.1NO03G01400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01400 ID=NO03G01400|Name=NO03G01400|organism=Nannochloropsis oceanica|type=gene|length=1430bp
AAACCACAGGATCATGACGGCAAGGACACGCGGCACAACGGCCGTGACAC
CAATAAGTAGCAGCGGGAAAGCTACCAGGGACACAGGCAACACCAAGACC
AAGACGACACGCACGAAAAACTCCTCCTCGACTTCCCAACCCCATCCCTC
ACCACCCGCCGTCGCGCTGACATCCGGCATTGACGTGGACGACGACGATG
ACGCGCCGGATGAGATGAAGgtacgtgcaagtaaggtgtggtaggacgaa
gatcacggtgagacggcttttagatgtaggcaagggattgtcatgcgctc
gccttgcacacactctaatcctcaccattcacccatcatatttagTCCAA
GGTGGTACGTGACGACGACCAAAGGCAGGAAAGTAATGCAGCCGCCACCT
CAAGCAGCAAGAGCAAGAGCAAGAAGCGGCCACGCAAGGCCAAGGCGCGT
GAGGAACTGTATTGGGCGGAGAAGAAAGGGAAGCGAGAGAGAGGGGAGGA
AGCGGAGGAGGAGGATGAGGAGGAAAAAGAGGGCGAGGAGGGGCTGGCCA
TGGTTGCTGCCGAAGGAGAATCTGACGAGAAGGTCGCTGGAATGGTCAGT
AAGAAATCCAAAGTCACGTCGTCGGCAGGGGCAGGCCCTTTGTCGGCAGA
TTATTTGGAGTCGGTTCAGCTGGCCAAGCAGGCGGAGCAGCGACGGCGGA
TCCATGAGGCGTTGCGAGTGATTGAGTCGGCCAGgcacgtcgatgaaggg
aggggaagggaaggatgcacgaatatgggaggataaatcgaactttcact
tctggggtcacactcatacgaacgtgctttactaattgtatactcctatc
acgcgacgtacattcagACGGAAGGCCGAGGCAGCGGAGCGACAGAAGCC
GAAGGCGCTCAAGGCTCCGCGTGTCTTgtaagtgtacgaaggaggaaggg
agggagggagggagtgagggaggggggggggctgcacaatattttacgat
gaaagaaaaataggtgcctcacatacgttccttaaatttgaacaacagCG
GTAACATTCATGTCGCCACACTGGGTGCAGTGCAGCAGCAAGCGGACGAG
GCGCCTGACGTGCCTCCTGAGgtatgtacaggaaaaaaggccacttgctg
ccaacactacacgcaccaagcagccttctccttgacccacacattggctt
ctttcttcattattacgtccttttacagGTGCTAGCTTTTGCACGCTCAC
TGGGTGAGAGTAGCGGCAAGGCGACCCAGCGGAAACGTGTACCTTTCGTC
GCCTTTTCCAATAGCAAGCCCAAAATGCTTGCTACTGCTTCTGTGAGGAG
GGGGAGAGCGGGCAAGGGAAAGGTGGGCAGCGGCAAAAAATGAGAACAAG
CAAAGCATGAAAAGGAGGTCTAAAGATGGA
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protein sequence of NO03G01400.5

>NO03G01400.5-protein ID=NO03G01400.5-protein|Name=NO03G01400.5|organism=Nannochloropsis oceanica|type=polypeptide|length=216bp
MTARTRGTTAVTPISSSGKATRDTGNTKTKTTRTKNSSSTSQPHPSPPAV
ALTSGIDVDDDDDAPDEMKSKVVRDDDQRQESNAAATSSSKSKSKKRPRK
AKAREELYWAEKKGKRERGEEAEEEDEEEKEGEEGLAMVAAEGESDEKVA
GMVSKKSKVTSSAGAGPLSADYLESVQLAKQAEQRRRIHEALRVIESARH
VDEGRGREGCTNMGG*
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protein sequence of NO03G01400.4

>NO03G01400.4-protein ID=NO03G01400.4-protein|Name=NO03G01400.4|organism=Nannochloropsis oceanica|type=polypeptide|length=216bp
MTARTRGTTAVTPISSSGKATRDTGNTKTKTTRTKNSSSTSQPHPSPPAV
ALTSGIDVDDDDDAPDEMKSKVVRDDDQRQESNAAATSSSKSKSKKRPRK
AKAREELYWAEKKGKRERGEEAEEEDEEEKEGEEGLAMVAAEGESDEKVA
GMVSKKSKVTSSAGAGPLSADYLESVQLAKQAEQRRRIHEALRVIESARH
VDEGRGREGCTNMGG*
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protein sequence of NO03G01400.3

>NO03G01400.3-protein ID=NO03G01400.3-protein|Name=NO03G01400.3|organism=Nannochloropsis oceanica|type=polypeptide|length=216bp
MTARTRGTTAVTPISSSGKATRDTGNTKTKTTRTKNSSSTSQPHPSPPAV
ALTSGIDVDDDDDAPDEMKSKVVRDDDQRQESNAAATSSSKSKSKKRPRK
AKAREELYWAEKKGKRERGEEAEEEDEEEKEGEEGLAMVAAEGESDEKVA
GMVSKKSKVTSSAGAGPLSADYLESVQLAKQAEQRRRIHEALRVIESARH
VDEGRGREGCTNMGG*
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protein sequence of NO03G01400.2

>NO03G01400.2-protein ID=NO03G01400.2-protein|Name=NO03G01400.2|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MTARTRGTTAVTPISSSGKATRDTGNTKTKTTRTKNSSSTSQPHPSPPAV
ALTSGIDVDDDDDAPDEMKSKVVRDDDQRQESNAAATSSSKSKSKKRPRK
AKAREELYWAEKKGKRERGEEAEEEDEEEKEGEEGLAMVAAEGESDEKVA
GMVSKKSKVTSSAGAGPLSADYLESVQLAKQAEQRRRIHEALRVIESARR
KAEAAERQKPKALKAPRVFGNIHVATLGAVQQQADEAPDVPPEVCTGKKA
TCCQHYTHQAAFSLTHTLASFFIITSFYRC*
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protein sequence of NO03G01400.1

>NO03G01400.1-protein ID=NO03G01400.1-protein|Name=NO03G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MTARTRGTTAVTPISSSGKATRDTGNTKTKTTRTKNSSSTSQPHPSPPAV
ALTSGIDVDDDDDAPDEMKSKVVRDDDQRQESNAAATSSSKSKSKKRPRK
AKAREELYWAEKKGKRERGEEAEEEDEEEKEGEEGLAMVAAEGESDEKVA
GMVSKKSKVTSSAGAGPLSADYLESVQLAKQAEQRRRIHEALRVIESARR
KAEAAERQKPKALKAPRVFGNIHVATLGAVQQQADEAPDVPPEVLAFARS
LGESSGKATQRKRVPFVAFSNSKPKMLATASVRRGRAGKGKVGSGKK*
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Synonyms
Publications