NO30G00540, NO30G00540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00540 vs. NCBI_GenBank
Match: CBJ30213.1 ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 [Ectocarpus siliculosus]) HSP 1 Score: 386.3 bits (991), Expect = 2.100e-103 Identity = 240/590 (40.68%), Postives = 312/590 (52.88%), Query Frame = 0 Query: 69 IQTQGKLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGG----PSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALESVRCLTMIYYLNADWTPEQGGELRLFLGD------DEGG---RGHQD---GRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSSSTPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQF----SEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPS-DTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSE 638 ++ +G++ PAGM R G W+ RGD I W++ P L LL RL +R ++ D G S P L L K S+QLA YPG+G+ YVRHRDT P+ + +E + K +T +YYLN DW P GG+LR+ L +EGG G ++ GR WD+ P+LDRLV+FRSD++EHEVLP PR A+T WFYGR LG S ST SP + + P + PL S EASIFVS+ SYRDSE T+ LF A PER+ VGLV Q +E+E T + +VR+L + +AAGP WAR +AQ++ + E+YVLQ+DSH RFRPGWD +L+ TL CP+ + ILTTYP+GY LP P+ +TRPTLL P GF GMLRQT R ++ P+PS LWASGF+F+ + EVPYDP LRH FFGEE SMAAR++T GWDFFAPP+ V+YHLW+R HR SFR+ T+++E Sbjct: 83 VENRGEMKPAGMGRRDGVWHGQQSRGDSIMWITEGIRGKGELP------------------------EGLENLLMRLSALRGPLN--DGCGLPTTSSAPGLGLVK-DTTSVQLARYPGDGRGYVRHRDT-----PRSAQDSEEAERK-------ITALYYLNPDWRPSMGGQLRVHLDSRPEAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPASAPRLAVTLWFYGR---QLGLPASPSTRSPSSVPPLPAPEQQLAAGD--------------------------------------DTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPS-FKPILTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRK--ARDPLPSPLWASGFSFSASAVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQNSTKEAE 589
BLAST of NO30G00540 vs. NCBI_GenBank
Match: XP_024576091.1 (c transferase [Plasmopara halstedii] >CEG39722.1 c transferase [Plasmopara halstedii]) HSP 1 Score: 380.6 bits (976), Expect = 1.200e-101 Identity = 243/631 (38.51%), Postives = 337/631 (53.41%), Query Frame = 0 Query: 74 KLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGGP--SPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALES-VRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSSSTPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEE---LGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWG 699 K C A + G ND RGD+I W I +PS+ P+ S SP+ L ++R +++ L G SP LD S Q + +PG+G R+V+H DT+ + DERK + +S VR +T +YYLN W PE GG LR L WDV P LD LV+FRS +EHEVLP Y R A+T W+YG+ PL +SS P+ L+I P S + + E ++ SIFV+I SYRDSEC+HT+ +LF A PERI+ G+ LQ + ++ F + N++R + + AAGPC AR AQ L Q E + LQ+DSHMRFRPGWD FL+ L +C + ++ ILTTYP+GYTLP+ ++ RPTLLC S FDSHGMLRQ+++ + L +P+ S WA+GF F+ AQ EVPYD +LR LFFGEE SMAARLWT GW+FFAP E+V+YHLW+R +RP F+EL+ ++++ + S+ V++LL T+++ E+ +G YGLGS RS + Y++ +G+ F A A+WG Sbjct: 101 KFCEAKVGTGENSRNDQALRGDKIHW--IQTPSDLKTPTESV----------SPAIL----------------QLRRQVEALVYGFKIVSP---ELDLRNVVSTQFSVFPGDGARFVKHVDTY------RNTQNDERKAMSKDSLVRLVTCVYYLNDHWLPEDGGYLRFHLKTSP----LLSACHWDVPPKLDTLVLFRSLDVEHEVLPTYRERKAVTIWYYGK------PLKASSGPTSSECLSIPRPLPS-----------------------------------------------------MNGKKFTYE-KQPSIFVAIPSYRDSECKHTIENLFARATFPERIYAGICLQTDDTDE--TFAYLQSKYSNNKLRIHWMDYRSAAGPCVARSYAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKC-SLSKPILTTYPLGYTLPNEVSTECRPTLLCASSFDSHGMLRQSSKTLTRV--LTKPLSSLFWAAGFAFSSAQVIAEVPYDESLRFLFFGEESSMAARLWTSGWNFFAPSESVVYHLWNRAYRPVFQELECDETKRSRALSLQHVKQLLQIDVTSESHEKSPCVGTYGLGSERSFKSYQKHIGIDF-FARKIEWRAEWG 624
BLAST of NO30G00540 vs. NCBI_GenBank
Match: ETO81461.1 (hypothetical protein F444_04213 [Phytophthora parasitica P1976] >ETP50574.1 hypothetical protein F442_04130 [Phytophthora parasitica P10297]) HSP 1 Score: 364.4 bits (934), Expect = 8.600e-97 Identity = 232/642 (36.14%), Postives = 331/642 (51.56%), Query Frame = 0 Query: 64 EEIRTIQTQGKLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGGPSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALES-VRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSS---STPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEE---LGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWG 699 + + + T G A + G ND RGD I W I +PS+ +AP+ S P+ L + ++ + L + P L N+ S Q A +PG+G R+V+H DT+ ++ K DER + + VR +T +YYLN W E GG LR+ + D + H WDV P LD LVVFRS +EHEV+P Y R A+T W+YG+P+ L + S P PL S+ G+ ++ + SIFV+I SYRDSEC+HT+ +L A PERI +G+ LQ E + + + ++V + + +AAGPC AR AQ L Q E + LQ+DSHMRFRPGWD FL+ L +CP+ ++ ILTTYP+GYTLP+ ++ RPTLLC S FDS GMLRQT++ + +P+PS WA+GF F+ ++ E+VPYD LR LFFGEE SM ARLWT GWDFF P ETV+YHLW+R +RP F+EL++ +++ + S V+++L T N ++ +G+Y LG+ RS Y++ +GV F + A+WG Sbjct: 102 DALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHW--IQTPSDLNAPAQSI----------HPAILHLR------------RQVESLVYGLRKASPEMDLRNI-----VSTQFAIFPGDGARFVKHVDTY-SNVHK-----DERGGISKDGLVRLITCVYYLNDQWEIEHGGYLRVHVKDSK----HLPACHWDVPPKLDTLVVFRSRDVEHEVMPTYRERKAVTIWYYGKPSKASSALARTEVLSVPRPLPSIT--------------------------------------------------GNEAN-------------HTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTSAYLK--SKYSTSKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPS-SKPILTTYPLGYTLPNEISTECRPTLLCASSFDSLGMLRQTSKILSTKS--TKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQILQIDQTPVNQDDTLNVGKYTLGTERSFESYQKHIGVDFFSQNI-EWRAEWG 635
BLAST of NO30G00540 vs. NCBI_GenBank
Match: ETI52787.1 (hypothetical protein F443_04152 [Phytophthora parasitica P1569] >ETM52388.1 hypothetical protein L914_03987 [Phytophthora parasitica]) HSP 1 Score: 363.6 bits (932), Expect = 1.500e-96 Identity = 232/642 (36.14%), Postives = 331/642 (51.56%), Query Frame = 0 Query: 64 EEIRTIQTQGKLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGGPSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALES-VRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSS---STPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEE---LGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWG 699 + + + T G A + G ND RGD I W I +PS+ +AP+ S P+ L + ++ + L + P L N+ S Q A +PG+G R+V+H DT+ ++ K DER + + VR +T +YYLN W E GG LR+ + D + H WDV P LD LVVFRS +EHEV+P Y R A+T W+YG+P+ L + S P PL S+ G+ ++ + SIFV+I SYRDSEC+HT+ +L A PERI +G+ LQ E + + + ++V + + +AAGPC AR AQ L Q E + LQ+DSHMRFRPGWD FL+ L +CP+ ++ ILTTYP+GYTLP+ ++ RPTLLC S FDS GMLRQT++ + +P+PS WA+GF F+ ++ E+VPYD LR LFFGEE SM ARLWT GWDFF P ETV+YHLW+R +RP F+EL++ +++ + S V+++L T N ++ +G+Y LG+ RS Y++ +GV F + A+WG Sbjct: 102 DALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHW--IQTPSDLNAPAQSI----------HPAILHLR------------RQVESLVYGLRKASPEMDLRNI-----VSTQFAIFPGDGARFVKHVDTY-SNVHK-----DERGGISKDGLVRLITCVYYLNDQWEIEHGGYLRVHVKDSK----HLPACHWDVPPKLDTLVVFRSRDVEHEVMPTYRERKAVTIWYYGKPSKASSALARTEVLSVPRPLPSIT--------------------------------------------------GNEAN-------------HTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTSAYLK--SKYSTSKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPS-SKPILTTYPLGYTLPNEISTECRPTLLCASSFDSLGMLRQTSKILSTKS--TKPLPSLFWAAGFAFSSSKVIEQVPYDATLRCLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQILQIDQTPVNQDDTLNVGKYTLGTERSFESYQKHIGVDFFSQNI-EWRAEWG 635
BLAST of NO30G00540 vs. NCBI_GenBank
Match: XP_008901360.1 (hypothetical protein PPTG_08181 [Phytophthora parasitica INRA-310] >ETN13306.1 hypothetical protein PPTG_08181 [Phytophthora parasitica INRA-310] >ETP22604.1 hypothetical protein F441_04114 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 363.2 bits (931), Expect = 1.900e-96 Identity = 231/642 (35.98%), Postives = 331/642 (51.56%), Query Frame = 0 Query: 64 EEIRTIQTQGKLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGGPSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALES-VRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSS---STPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEE---LGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWG 699 + + + T G A + G ND RGD I W I +PS+ +AP+ S P+ L + ++ + L + P L N+ S Q A +PG+G R+V+H DT+ ++ K DER + + VR +T +YYLN W E GG LR+ + D + H WDV P LD LV+FRS +EHEV+P Y R A+T W+YG+P+ L + S P PL S+ G+ ++ + SIFV+I SYRDSEC+HT+ +L A PERI +G+ LQ E + + + ++V + + +AAGPC AR AQ L Q E + LQ+DSHMRFRPGWD FL+ L +CP+ ++ ILTTYP+GYTLP+ ++ RPTLLC S FDS GMLRQT++ + +P+PS WA+GF F+ ++ E+VPYD LR LFFGEE SM ARLWT GWDFF P ETV+YHLW+R +RP F+EL++ +++ + S V+++L T N ++ +G+Y LG+ RS Y++ +GV F + A+WG Sbjct: 102 DALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHW--IQTPSDLNAPAQSI----------HPAILHLR------------RQVESLVYGLRKASPEMDLRNI-----VSTQFAIFPGDGARFVKHVDTY-SNVHK-----DERGGISKDGLVRLITCVYYLNDQWEIEHGGYLRVHVKDSK----HLPACHWDVPPKLDTLVLFRSRDVEHEVMPTYRERKAVTIWYYGKPSKASSALARTEVLSVPRPLPSIT--------------------------------------------------GNEAN-------------HTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTSAYLK--SKYSTSKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPS-SKPILTTYPLGYTLPNEISTECRPTLLCASSFDSLGMLRQTSKILSTKS--TKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQILQIDQTPVNQDDTLNVGKYTLGTERSFESYQKHIGVDFFSQNI-EWRAEWG 635
BLAST of NO30G00540 vs. NCBI_GenBank
Match: ETL99210.1 (hypothetical protein L917_03881 [Phytophthora parasitica]) HSP 1 Score: 360.5 bits (924), Expect = 1.200e-95 Identity = 231/642 (35.98%), Postives = 330/642 (51.40%), Query Frame = 0 Query: 64 EEIRTIQTQGKLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGGPSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALES-VRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSS---STPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEE---LGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWG 699 + + + T G A + G ND RGD I W I +PS+ +AP+ S P+ L + ++ + L + P L N+ S Q A +PG+G R+V+H DT+ ++ K DER + + VR +T +YYLN W E GG LR+ + D + H WDV P LD LVVFRS +EHEV+P Y R A+T W+YG+P+ L + S P PL S+ G+ ++ + SIFV+I SYRDSEC+HT+ +L A ERI +G+ LQ E + + + ++V + + +AAGPC AR AQ L Q E + LQ+DSHMRFRPGWD FL+ L +CP+ ++ ILTTYP+GYTLP+ ++ RPTLLC S FDS GMLRQT++ + +P+PS WA+GF F+ ++ E+VPYD LR LFFGEE SM ARLWT GWDFF P ETV+YHLW+R +RP F+EL++ +++ + S V+++L T N ++ +G+Y LG+ RS Y++ +GV F + A+WG Sbjct: 102 DALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHW--IQTPSDLNAPAQSI----------HPAILHLR------------RQVESLVYGLRKASPEMDLRNI-----VSTQFAIFPGDGARFVKHVDTY-SNVHK-----DERGGISKDGLVRLITCVYYLNDQWEIEHGGYLRVHVKDSK----HLPACHWDVPPKLDTLVVFRSRDVEHEVMPTYRERKAVTIWYYGKPSKASSALARTEVLSVPRPLPSIT--------------------------------------------------GNEAN-------------HTTQPSIFVAIPSYRDSECRHTVDNLLARATFLERISIGICLQTDENDGTSAYLK--SKYSTSKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPS-SKPILTTYPLGYTLPNEISTECRPTLLCASSFDSLGMLRQTSKILSTKS--TKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQILQIDQTPVNQDDTLNVGKYTLGTERSFESYQKHIGVDFFSQNI-EWRAEWG 635
BLAST of NO30G00540 vs. NCBI_GenBank
Match: GAX99799.1 (Hypothetical protein PINS_007618 [Pythium insidiosum]) HSP 1 Score: 359.4 bits (921), Expect = 2.800e-95 Identity = 248/705 (35.18%), Postives = 339/705 (48.09%), Query Frame = 0 Query: 6 DVLDTITPAEVHLLAHPSPSSSFFVRDGAFLLAPSXXXXXXXXXXXXXXXXXXXXXXXEEIRTIQTQGKLCPAGMSRGSGKWNDDDFRGDEIAWLSILSPSNPSAPSPSFSSDTFTPNKSSPSTLSIAPRSALHTLLGRLEEIRDRIDILDRGGPSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKE----GGEGDERKDKALESVRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSSSTPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQF-SEEEDKACFTHPLPPLWA------NQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEELGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWGG 700 D+ + P+E+ +L HP+ S F V++G + + + + + AG+ G+ + RGD I W+ NK + A+ LL R+E + + + P L N+ S QLA +PG+G R+VRH DT+ + GGE + E VR LT +YYLN DW PE G LR++ WDVAP LD LVVFRS +EHEVLP + R ALT W+YG P PSP S + P++S E + SIFV+I SYRD EC T+ LF+ A P R+ VG+ LQ +E +D+ + Q+R L EAAGPC AR AQ+L E+Y LQ+DSHMRFR WD FL+ L RCP+ +++LTTYP+GYTLP SD+RPTLLC S FD G LRQ ++ ++ + P+PS WA+GF F+ +Q EEVPYD +LR LFFGEE SM+ARLWT GWDFFAP E +YHLWSR +RP F+EL+T++ + +S+ RV LL + N +GLG+VR++++YE+ +GVSFA T+ A+WGG Sbjct: 73 DMRFKLNPSELFVLQHPT-SPGFVVKEGXLGIEDA-------------------HRVRAALLALAERASFHDAGVGHGTNFRQEQALRGDRIHWIQ-------------------RDNKEDLN-------PAISLLLRRIESL---VYGVKNAVPELQLRNV-----TSTQLAIFPGDGSRFVRHTDTYASAHAQHRSSVGGE-------STELVRRLTCVYYLNDDWVPEHQGHLRVYTKQQTVAPRTMPPH-WDVAPRLDTLVVFRSTDVEHEVLPAFHERMALTTWYYGPP------------PSP--SPSCVAPATSRV----------------------------------------------------------ERKTDGSIFVAIPSYRDPECAPTVIDLFRKASDPSRLSVGICLQSENEHKDELKLREAVASALGERSPRPEQLRIRWLHFSEAAGPCVARAEAQSLWTGEQYYLQIDSHMRFRDAWDSFLIDELHRCPS-HKAVLTTYPLGYTLPDHISSDSRPTLLCASRFDEDGTLRQASKTLAKK--ADSPLPSLFWAAGFAFSSSQVVEEVPYDASLRFLFFGEESSMSARLWTHGWDFFAPREMPIYHLWSRAYRPVFQELETKERRQTREESLRRVADLLLQRGDDSN----ATFGLGAVRTMQQYEQHIGVSFATQTI-EWRAEWGG 635
BLAST of NO30G00540 vs. NCBI_GenBank
Match: XP_008861890.1 (hypothetical protein H310_00774 [Aphanomyces invadans] >ETW10479.1 hypothetical protein H310_00774 [Aphanomyces invadans]) HSP 1 Score: 350.5 bits (898), Expect = 1.300e-92 Identity = 214/532 (40.23%), Postives = 282/532 (53.01%), Query Frame = 0 Query: 173 RSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALESVRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSSSTPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEELGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWGGQPSDF 705 +S QLA +PGN R+V+H DT+ +KD+ + CL YYLNADW P GG LR+ L +DG D+ P+LD LVVFRS + HEVLP R ALT WFYG PT + P +++ P L P+++ G + PP I D ++IFVSI SY DSECQ T+ LF TA P R+ GL LQ E + + +QVR + +A GPC AR Q L + E Y LQ+DSHMRFR GWDVFL+ L +C +P R+ILTTYP+GY LP+ D RPTLLC S FDS+G++RQ ++ K +PIPS WA+GF F+ A +EV YDP+L HLFFGEE MAARLWT G+DFFAP E V+YHLWSR HRP+FR+ + +E +Q +S+ RV K+L EG + G GLG VR++ + GV ++ + ++ P +F Sbjct: 198 KSTQLAIFPGNNTRFVQHVDTY-----------GSKKDQLSRRITCL---YYLNADWQPSHGGALRVHL---------KDGSHEDIPPLLDSLVVFRSADVMHEVLPTTVDRLALTTWFYGGPTPSDVPTTAATIPKSLGK-----PNTATFETIEASPATLNRSHTPDASLPPPGLC---------------GGGMALPPPAIPDLI-------STIFVSIPSYCDSECQPTVAHLFATATAPSRVFAGLCLQHDEGDPAQAIA--FAAAYGDQVRVKRMHPADATGPCLARWETQQLWRGEPYYLQIDSHMRFRQGWDVFLIHELSQCSSP-RAILTTYPLGYNLPNQITRDIRPTLLCASHFDSNGLVRQCSKVLKTSP--SKPIPSMFWAAGFAFSRATVLQEVMYDPSLTHLFFGEENVMAARLWTHGYDFFAPTEAVVYHLWSRSHRPTFRDHQRNGTEAQQ-RSIQRVLKMLKEG-------DEGPCGLGRVRTIEAFVAAQGVHYSTKEIAWASLWSNRDPIEF 666
BLAST of NO30G00540 vs. NCBI_GenBank
Match: OQR94205.1 (hypothetical protein ACHHYP_01617 [Achlya hypogyna]) HSP 1 Score: 332.8 bits (852), Expect = 2.800e-87 Identity = 217/551 (39.38%), Postives = 272/551 (49.36%), Query Frame = 0 Query: 155 LDRGGPSPPLLNLDKCKRRSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALESVRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGRPTNTLGPLLSSSTPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPTPARSILTTYPIGYTLPSTCPSDTRPTLLCP-SGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEELGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWGGQPSDF 705 L + PS + N+ RS Q A +PGNG R+V H DT P R +T +YYLN W P GG LR+ H DV P+LD + FRS + HEVLP + R A T W+YG P P+ +L ALP E+A+IFVSIASYRDSEC TL LF TA P R+HVGL Q + +D A F LPP VR + A GPC ARHLAQ L + E Y LQ+DSHMRFR WD FL+ L RCP+PA +LTTYP+GYTLP+ P D RPTLLC S + G++RQ + K+Q P+PS+ WA+GF FA + EVPYDP L +FFGEE+SMAARL+T G+DFFAP E V+YHLWSR HRPSFR E + ++ + VR+L+ G E L GLGS+RSL + +G+ A V+ S+ G P +F Sbjct: 141 LTKKAPSLGIRNI-----RSTQFAVFPGNGSRFVTHVDTHAKTAP----------------CRRITCLYYLNPGWEPAHGGALRI----------HAATGAIDVPPLLDTCLFFRSFDVPHEVLPSFADRLAFTIWYYG-------------DPEPILALPPALPCPENAD------------------------------------------------------------EDATIFVSIASYRDSECAATLAELFATAKIPGRVHVGLCHQVVDGDDIA-FLDSLPP----TVRVHRMDAAAATGPCLARHLAQQLYEGETYYLQIDSHMRFRRSWDAFLIHELHRCPSPA-PVLTTYPLGYTLPNKIPDDVRPTLLCAVSEVPADGLVRQCGKVLKRQ--TAAPLPSRFWAAGFAFAHGRVVTEVPYDPALSFVFFGEELSMAARLFTNGFDFFAPSEAVVYHLWSRGHRPSFR----EHAPPQEPAATDYVRRLV-RGLPISQDERLRYRGLGSLRSLAAFHENVGLDPATGEVSWSSLWGGRDPIEF 574
BLAST of NO30G00540 vs. NCBI_GenBank
Match: XP_009827688.1 (hypothetical protein H257_04761 [Aphanomyces astaci] >ETV83017.1 hypothetical protein H257_04761 [Aphanomyces astaci]) HSP 1 Score: 324.3 bits (830), Expect = 9.800e-85 Identity = 202/537 (37.62%), Postives = 268/537 (49.91%), Query Frame = 0 Query: 173 RSMQLAYYPGNGKRYVRHRDTFPGDIPKEGGEGDERKDKALESVRCLTMIYYLNADWTPEQGGELRLFLGDDEGGRGHQDGRFWDVAPILDRLVVFRSDVIEHEVLPVYGPRFALTCWFYGR------PTNTLGPLLSSSTPSPLASLAIALPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPRGSFSSAPPLDIEDESLNEEVEEASIFVSIASYRDSECQHTLHSLFKTAMRPERIHVGLVLQFSEEEDKACFTHPLPPLWANQVRTLSLSHLEAAGPCWARHLAQALRQNERYVLQLDSHMRFRPGWDVFLLQTLLRCPT-----PARSILTTYPIGYTLPSTCPSDTRPTLLCPSGFDSHGMLRQTARRCKQQQHLEQPIPSKLWASGFNFAPAQAWEEVPYDPNLRHLFFGEEVSMAARLWTWGWDFFAPPETVLYHLWSRDHRPSFRELKTEKSEDEQMKSMMRVRKLLGEGTTAQNVEELGRYGLGSVRSLREYERLLGVSFALATVTSSNAQWG 699 +S QLA +PG+ R+V H DT+ D + R +T +YYLN W GG LR+ L QDG WD+ P+LD LVVFRS + HEVLP R ALT W+ P+ A+ +SS S PL++ ++IFVSI SY DSECQ T+ LF TA P R+ VGL LQ E++D++ ++ VR + +A GPC AR Q L + E + LQ+DSHMRFR GWDV+L+ L RC P ++ILTTYP+GYTLP+ P+DTRPTLLC S FDSHGMLRQ + K P+PS WA+GF F+ A +EVPYDP+L HLFFGEE MAARLWT G+DF+AP E V+YHLWSR HRP+F T +Q + ++L A+ E + GLG RS++++ GV+++ + ++ WG Sbjct: 194 KSTQLAVFPGHNTRFVPHVDTY-----------DHNNNAKQHLSRRITCLYYLNPSWESSHGGALRMHL---------QDGTTWDIPPVLDTLVVFRSTDVLHEVLPTTVHRLALTTWYXXXXXXXXIPSTXXXXXXXXXXXXSFATNIATRTTSSCVT-------------------------------------------GSNQPLEVAGGDAT-----STIFVSIPSYCDSECQPTVAHLFATAAAPSRVFVGLCLQ-HEQDDQSM------DMYGEHVRIKRMRPADATGPCLARWETQQLWKGEAFYLQIDSHMRFRRGWDVYLIDQLRRCSNSPQGRPRKAILTTYPLGYTLPNEIPNDTRPTLLCASAFDSHGMLRQCGKVLKTSP--SSPVPSAFWAAGFAFSRACVIQEVPYDPSLAHLFFGEENVMAARLWTHGYDFYAPCEAVVYHLWSRSHRPTF----TSPQRVDQAAKNASLERVLALLLQAKENEPMVACGLGRERSIQDFHAAQGVNWSTHEIQWTSL-WG 648 The following BLAST results are available for this feature:
BLAST of NO30G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00540 ID=NO30G00540|Name=NO30G00540|organism=Nannochloropsis oceanica|type=gene|length=2597bpback to top protein sequence of NO30G00540.1 >NO30G00540.1-protein ID=NO30G00540.1-protein|Name=NO30G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=753bpback to top Synonyms
Publications
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