NO30G00230, NO30G00230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00230 vs. NCBI_GenBank
Match: OEU07897.1 (Clavaminate synthase-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 166.8 bits (421), Expect = 1.800e-37 Identity = 88/239 (36.82%), Postives = 120/239 (50.21%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKY-GHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDG----ALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTFTQE 523 N F+ +T + +LH + + L+SSN++S+ L Y +N+ YLFG T+ EW +FL Y+ PPC+ C + ALSFG+G SGV WH+HGPG+SE LHGRK W LYPP P FHP+ +SL W + T+ +ED P C + PG+IL+FP+MWWHA +N++DY FVSTFTQE Sbjct: 90 NQQFQNITRSDRILHSFPDNFTVTLSSSNSFSEHSRTIPLASYLKEVNRNPTNPNMK-----SNENWYLFGETYSSEWKNFLRSYELPPCQACDNKFDENLIALSFGIGNSGSGVQWHVHGPGFSEALHGRKHWILYPPDYR--PDFHPDQTSLNWMYYNYSTITN-------------------MED------------KPLECTLSPGDILYFPNMWWHATVNVDDYTAFVSTFTQE 290
BLAST of NO30G00230 vs. NCBI_GenBank
Match: GAX14385.1 (hypothetical protein FisN_11Hh157 [Fistulifera solaris]) HSP 1 Score: 165.6 bits (418), Expect = 4.100e-37 Identity = 88/235 (37.45%), Postives = 119/235 (50.64%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGH-LEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTFTQE 523 N FR +TE+E ++ +G L+SSN+ S+ L++Y AN++ YLFG T+ EEW++FL HY+ PPC TCSD AL+FG+G R SGV WH+HGPG+SE +HGRK W LYPP P + + SS QW E T E + P C + PG++++FP W HA +NL+ Y VFVS FT E Sbjct: 86 NEQFRKLTEQEEIVRWFGEDFNVTLSSSNSLSENRRIVPLKQYIDETVTAKETLPDQL----ANESWYLFGETYSEEWSTFLKHYEIPPCYTCSDWPVALAFGIGNRGSGVQWHMHGPGFSEAIHGRKHWILYPPKER--PDYEKDQSSRQWME----TTYWEVV------------------------------SKPLECTLHPGDLIYFPDKWHHATINLDTYTVFVSAFTTE 280
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_009033288.1 (hypothetical protein AURANDRAFT_61395 [Aureococcus anophagefferens] >EGB12216.1 hypothetical protein AURANDRAFT_61395 [Aureococcus anophagefferens]) HSP 1 Score: 158.7 bits (400), Expect = 5.000e-35 Identity = 90/236 (38.14%), Postives = 115/236 (48.73%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPC--RTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTFTQE 523 N FR T R LL + G LTSSN+YS+ E TLR Y AN++ YLFG F + + Y P C C+ A SFGL SGVS+H HG G+ EVLHGRKRW LYPP + PP F P+ + +W + VLPTL G + + D C +GPGE+L+FP +WWHA LNL+D+ VFVS+F + Sbjct: 68 NDGFRRRTARAPLLERLGESRVVLTSSNSYSEHELATTLRAY------VEDHVPRHASDAAANESYYLFGPQFDAALEALVESYAHPACGGAWCARDAFAASFGLAGARSGVSFHTHGSGFGEVLHGRKRWILYPPGDAAPPGFDPDGPTRRWVDDVLPTLRG---------------ADLPAHD----------------CVLGPGELLYFPPLWWHATLNLDDHTVFVSSFASD 266
BLAST of NO30G00230 vs. NCBI_GenBank
Match: NP_001265655.1 (jmjC domain-containing protein 8 precursor [Gallus gallus]) HSP 1 Score: 154.8 bits (390), Expect = 7.200e-34 Identity = 88/231 (38.10%), Postives = 112/231 (48.48%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+AF+ + R+ LL YG +L+++N YS + +EY +DT+Y FG+ EW S HY PP R GA SFG+ SGV +H HGPGYSEV+ GRKRWFLYPP + P FHPN ++L W +H PTL E P C I PGE+L+FP WWHA LNL D +VF+STF Sbjct: 71 NSAFQALCTRQKLLAAYGERLVRLSTANTYSYRKVDVPFQEYVERLLKPQDPAAL------GSDTLYFFGDNNFTEWGSLFQHYVPPPFR-IPGTSGAYSFGIAGSGSGVPFHWHGPGYSEVIFGRKRWFLYPPDKT--PHFHPNETTLAWLQHTYPTLPPE--------------------------------ERPLECTIRPGEVLYFPDRWWHATLNL-DTSVFISTF 259
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_010718039.2 (PREDICTED: jmjC domain-containing protein 8 [Meleagris gallopavo]) HSP 1 Score: 154.5 bits (389), Expect = 9.400e-34 Identity = 88/231 (38.10%), Postives = 111/231 (48.05%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+AFR + R+ LL YG +L+++N YS + +EY +DT+Y FG+ EW S HY PP GA SFG+ SGV +H HGPGYSEV+ GRKRWFLYPP + P FHPN ++L W +H PTL E P C I PGE+L+FP WWHA LNL D +VF+STF Sbjct: 24 NSAFRALCTRQKLLAAYGERLVRLSTANTYSYRKVDVPFQEYVERLLKPQDPAAL------GSDTLYFFGDNNFTEWGSLFQHYVPPPFH-IPGTSGAYSFGIAGSGSGVPFHWHGPGYSEVIFGRKRWFLYPPDKT--PHFHPNETTLAWLQHTYPTLPPE--------------------------------ERPLECTIRPGEVLYFPDRWWHATLNL-DTSVFISTF 212
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_015732717.1 (PREDICTED: jmjC domain-containing protein 8 [Coturnix japonica]) HSP 1 Score: 153.7 bits (387), Expect = 1.600e-33 Identity = 87/231 (37.66%), Postives = 111/231 (48.05%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+AF+ + R+ LL YG +L+++N YS + +EY +DT+Y FG+ EW S HY PP R A SFG+ SGV +H HGPGYSEV+ GRKRWFLYPP + P FHPN ++L W +H PTL E P C I PGE+L+FP WWHA LNL D +VF+STF Sbjct: 71 NSAFQALCTRQKLLAAYGERPVRLSTANTYSYRKVDVPFQEYVEQLLKPQDPAAL------GSDTLYFFGDNNFTEWGSLFQHYVPPPFR-IPGTSAAYSFGIAGSGSGVPFHWHGPGYSEVIFGRKRWFLYPPDKT--PHFHPNETTLAWLQHTYPTLPPE--------------------------------EQPLECTIRPGEVLYFPDRWWHATLNL-DTSVFISTF 259
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_021267101.1 (jmjC domain-containing protein 8 isoform X1 [Numida meleagris]) HSP 1 Score: 152.9 bits (385), Expect = 2.700e-33 Identity = 87/231 (37.66%), Postives = 111/231 (48.05%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+AFR + R+ LL +G +L+++N YS + +EY +DT+Y FG+ EW S HY PP R GA SFG+ SGV +H HGPGYSEV+ GRKRWFLYPP + P FHPN ++L W +H PTL P C I PGE+L+FP WWHA LNL D +VF+STF Sbjct: 71 NSAFRALCTRQKLLAAFGERLVRLSTANTYSYRKVDVPFQEYVERLLKPQDPAAL------GSDTLYFFGDNNFTEWGSLFQHYVPPPFR-IPGTSGAYSFGIAGSGSGVPFHWHGPGYSEVIFGRKRWFLYPPDKT--PHFHPNETTLAWLQHTYPTL--------------------------------PPAERPLECTIRPGEVLYFPDRWWHATLNL-DTSVFISTF 259
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_005349132.1 (PREDICTED: jmjC domain-containing protein 8 [Microtus ochrogaster]) HSP 1 Score: 152.5 bits (384), Expect = 3.600e-33 Identity = 85/231 (36.80%), Postives = 112/231 (48.48%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+ FR + RENLL +G +L+++N YS + +EY NDT+Y FG+ EWA HY PP R A SFG+ SGV +H HGPG+SEV++GRKRWFLYPP + P FHPN ++L W + + P+L +A P C I GE+L+FP WWHA LNL D +VF+STF Sbjct: 81 NSRFRALCSRENLLASFGDNVVRLSTANTYSYRKVDLPFQEYVEQLLHPQDPTSL------GNDTLYFFGDNNFTEWAPLFQHYSPPPFRLLGTTP-AYSFGIAGAGSGVPFHWHGPGFSEVIYGRKRWFLYPPEKT--PEFHPNKTTLAWLQEIYPSL--------------------------------APSARPLECTIQAGEVLYFPDRWWHATLNL-DTSVFISTF 269
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_021041864.1 (jmjC domain-containing protein 8 isoform X2 [Mus caroli]) HSP 1 Score: 152.5 bits (384), Expect = 3.600e-33 Identity = 86/231 (37.23%), Postives = 112/231 (48.48%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+ FR + RENLL +G +L+++N YS + +EY NDT+Y FG+ EWAS HY PP R A SFG+ SGV +H HGPG+SEV++GRKRWFLYPP + P FHPN ++L W + P+L +A P C I GE+L+FP WWHA LNL D +VF+STF Sbjct: 48 NSKFRALCSRENLLASFGDNVVRLSTANTYSYQKVDLPFQEYVEQLLQPQDPASL------GNDTLYFFGDNNFTEWASLFQHYSPPPFRLLGTTP-AYSFGIAGAGSGVPFHWHGPGFSEVIYGRKRWFLYPPEKT--PEFHPNKTTLAWLLEIYPSL--------------------------------ALSARPLECTIQAGEVLYFPDRWWHATLNL-DTSVFISTF 236
BLAST of NO30G00230 vs. NCBI_GenBank
Match: XP_021041863.1 (jmjC domain-containing protein 8 isoform X1 [Mus caroli]) HSP 1 Score: 152.5 bits (384), Expect = 3.600e-33 Identity = 86/231 (37.23%), Postives = 112/231 (48.48%), Query Frame = 0 Query: 289 NAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLREYXXXXXXXXXXXXXXXXXXGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQEHVLPTLGGEXXXXXXXXXXXXXXSGMVVEDGEEICLEAGTNAMPFICDIGPGEILHFPSMWWHAVLNLEDYNVFVSTF 520 N+ FR + RENLL +G +L+++N YS + +EY NDT+Y FG+ EWAS HY PP R A SFG+ SGV +H HGPG+SEV++GRKRWFLYPP + P FHPN ++L W + P+L +A P C I GE+L+FP WWHA LNL D +VF+STF Sbjct: 138 NSKFRALCSRENLLASFGDNVVRLSTANTYSYQKVDLPFQEYVEQLLQPQDPASL------GNDTLYFFGDNNFTEWASLFQHYSPPPFRLLGTTP-AYSFGIAGAGSGVPFHWHGPGFSEVIYGRKRWFLYPPEKT--PEFHPNKTTLAWLLEIYPSL--------------------------------ALSARPLECTIQAGEVLYFPDRWWHATLNL-DTSVFISTF 326 The following BLAST results are available for this feature:
BLAST of NO30G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00230 ID=NO30G00230|Name=NO30G00230|organism=Nannochloropsis oceanica|type=gene|length=4108bpback to top protein sequence of NO30G00230.1 >NO30G00230.1-protein ID=NO30G00230.1-protein|Name=NO30G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bpback to top protein sequence of NO30G00230.2 >NO30G00230.2-protein ID=NO30G00230.2-protein|Name=NO30G00230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=523bpback to top protein sequence of NO30G00230.3 >NO30G00230.3-protein ID=NO30G00230.3-protein|Name=NO30G00230.3|organism=Nannochloropsis oceanica|type=polypeptide|length=594bpback to top protein sequence of NO30G00230.4 >NO30G00230.4-protein ID=NO30G00230.4-protein|Name=NO30G00230.4|organism=Nannochloropsis oceanica|type=polypeptide|length=553bpback to top protein sequence of NO30G00230.5 >NO30G00230.5-protein ID=NO30G00230.5-protein|Name=NO30G00230.5|organism=Nannochloropsis oceanica|type=polypeptide|length=507bpback to top protein sequence of NO30G00230.6 >NO30G00230.6-protein ID=NO30G00230.6-protein|Name=NO30G00230.6|organism=Nannochloropsis oceanica|type=polypeptide|length=580bpback to top Synonyms
Publications
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