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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr30 | genome | chr30:101992..106321 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO30G00230.6 vs.
Match: GAX14385.1 (hypothetical protein FisN_11Hh157 [Fistulifera solaris]) HSP 1 Score: 140.2 bits (352), Expect = 2.000e-29 Identity = 69/154 (44.81%), Postives = 95/154 (61.69%), Query Frame = 0
Query: 360 NAAFRMMTERENLLHKYGH-LEAKLTSSNAYSQGESHKTLREYLQEEWRERERRGGREGGRGANDTMYLFGNTFGEEWASFLSHYQRPPCRTCSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPSFHPNMSSLQWQE 513
N FR +TE+E ++ +G L+SSN+ S+ L++Y+ E +E + AN++ YLFG T+ EEW++FL HY+ PPC TCSD AL+FG+G R SGV WH+HGPG+SE +HGRK W LYPP P + + SS QW E
Sbjct: 86 NEQFRKLTEQEEIVRWFGEDFNVTLSSSNSLSENRRIVPLKQYIDETVTAKETLPDQL----ANESWYLFGETYSEEWSTFLKHYEIPPCYTCSDWPVALAFGIGNRGSGVQWHMHGPGFSEAIHGRKHWILYPPKER--PDYEKDQSSRQWME 233
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO30G00230.6 ID=NO30G00230.6|Name=NO30G00230.6|organism=Nannochloropsis oceanica|type=mRNA|length=2191bp
AATAGGGACACAGCCATGGAAGCCAACACCGATTCCGAGGATCTCCAGTC
CCTAATCGAGAAATCCCGGGCTGCGGGTGCTAAGAGAAAGGAGTCAATGG
GAAGCAAGAAATCCTCCTCATCGCCTTTCAAGCACTCGCCTCTCAAGAAT
CTCTTTCGTCGCCGCCTGTCGAAAAAGAGAGGAGCAGACACAAACTTAGG
GCCCCAAGACAAACACCAAGACAACACTATGATTATTTCCTCCTCCTCCT
CCTTCCCTTCACCCTCCTCCTTTCCTTCCTCCTCCTCCTCCTCCTTCCCT
TCACCCTCCTCCTTTCCTTCCTCCTCCTCCTCCTCCTTCCCTTTCTCCTC
CTCCTCCTTTCCTTCCTCCTCCTCCTCCTTTCCTTCCTCCTCCTCCTTGC
CTTCGGCCTCTTCTTCCTTCCACCTCCCCTTTTCCTCCTCCTCCCCTCCC
TCCCTCCCTCCCTCCTATCCCCTTTCCGGCACACCAGCCTCCTTGTCATC
GCCTTCCTCCCGTCCCTCCCAAGGGGTCCATCCCACCAGCGTCGTCAGTA
GTACGACAAACACTTCTACCACCAGCACCAGCACCAGCACCAGCAAAAAC
AACAGCACCAGCAGCAGCGTCATTACCAGCAGTACGACCAGCACCTGTAT
CGGTAACATCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAAACGGAGGAAGGGCGAGAAAGCCTCGCTGTGGGGAGGGCCG
GGGGGGCTGCTACTGTTGGCAGGGTCGACCTTTTGGGGCTTCATTTCCTC
GTACTTCTTGGTCATGCAGAGCGACCGACTCGCATCCCTGGAGCATGTGC
AGCCACAACAACATCCACATCATCAAGAAGCCTCCTCCTCCTCCTCCTGC
ATGCTACCTCGGATCCCTCTCGCTTCCCTCCCTCTTCCCCTCCGCTCCTT
CCCGTCTCCCGTCGTCGTACTCCTCCCCGATCAGGAGGAGGGAGTGGGGG
AGAGAGGGAAGGAGGGAGGGCATAGAAAGTATGGAGGGGAGAAGTCAGAA
GTGGGAGGGAGGGAGGGCGGGAGGGAGGAAGCGCACTCGTATAACGCGGC
GTTCCGGATGATGACGGAAAGGGAGAACTTACTACACAAGTACGGGCACT
TGGAGGCCAAGCTGACAAGCAGCAACGCCTACAGCCAAGGCGAGTCCCAC
AAAACGCTGCGGGAGTACCTGCAGGAAGAATGGAGGGAGAGAGAGAGGAG
GGGAGGGAGGGAGGGAGGGAGGGGAGCGAACGACACGATGTACTTGTTCG
GAAATACATTTGGGGAGGAGTGGGCCTCCTTTTTGTCGCACTACCAACGC
CCTCCTTGCCGGACTTGCTCCGACCCCGACGGGGCCTTGAGCTTCGGCCT
CGGTCCTCGTCATTCCGGCGTTTCCTGGCACATCCACGGCCCGGGCTACA
GCGAGGTGCTGCACGGACGGAAGAGGTGGTTTCTCTACCCCCCTTCGTCC
TCCCCTCCTCCCTCCTTCCATCCTAACATGAGCAGCCTCCAATGGCAAGA
GCATGTACTGCCCACGCTGGGAGGAGAAGGAGGAGGAGGAAGGAGAGAGA
AAGGGAGGGAGGAAGAAGGATCTGGCATGGTCGTTGAAGACGGCGAGGAG
ATATGCCTAGAGGCAGGAACGAACGCCATGCCCTTCATCTGCGACATCGG
CCCGGGGGAAATACTGGTGAGGGAGCGATGTATCAAAGCAAAGCTGTCAA
TATGATCAGAGGCTAGGCCATGGTGGTAATCAATCTCACCAAAGAGTCAC
ATCAAATACGGCGTGGAATACACAAATCGAATCATTCCCCTCTTACCCCC
ACCCATCTTCTCCTCCCTGCCTCTTTCCCCTTCCTCAGCACTTTCCGTCC
ATGTGGTGGCACGCGGTTCTCAACCTGGAGGACTACAACGTCTTCGTCTC
CACCTTCACCCAGGAGTAGGACAAGGGAGGGAGGAAGGGAGGGAGCGATA
AAAAAGAGGGGCATCACACCAACGAAGCAATGAAGCGAGGGAGGGGGAAA
GGTGGGAGGGAGGGAGCATGAGGAGGTTGTTTGTCCATTTTCAAATGTAT
ACAAGGCTCGAAGAAAACGCGGGTATAATAATGAGAAAGACCTTGAGCAG
ATCGATGGTTGCGATGGAGAAACATGCTCATTTGGCTGGTG back to topprotein sequence of NO30G00230.6 >NO30G00230.6-protein ID=NO30G00230.6-protein|Name=NO30G00230.6|organism=Nannochloropsis oceanica|type=polypeptide|length=580bp
MEANTDSEDLQSLIEKSRAAGAKRKESMGSKKSSSSPFKHSPLKNLFRRR
LSKKRGADTNLGPQDKHQDNTMIISSSSSFPSPSSFPSSSSSSFPSPSSF
PSSSSSSFPFSSSSFPSSSSSFPSSSSLPSASSSFHLPFSSSSPPSLPPS
YPLSGTPASLSSPSSRPSQGVHPTSVVSSTTNTSTTSTSTSTSKNNSTSS
SVITSSTTSTCIGNISSSSSSNSSSSSSSSSKRRKGEKASLWGGPGGLLL
LAGSTFWGFISSYFLVMQSDRLASLEHVQPQQHPHHQEASSSSSCMLPRI
PLASLPLPLRSFPSPVVVLLPDQEEGVGERGKEGGHRKYGGEKSEVGGRE
GGREEAHSYNAAFRMMTERENLLHKYGHLEAKLTSSNAYSQGESHKTLRE
YLQEEWRERERRGGREGGRGANDTMYLFGNTFGEEWASFLSHYQRPPCRT
CSDPDGALSFGLGPRHSGVSWHIHGPGYSEVLHGRKRWFLYPPSSSPPPS
FHPNMSSLQWQEHVLPTLGGEGGGGRREKGREEEGSGMVVEDGEEICLEA
GTNAMPFICDIGPGEILVRERCIKAKLSI* back to topmRNA from alignment at chr30:101992..106321+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO30G00230.6 ID=NO30G00230.6|Name=NO30G00230.6|organism=Nannochloropsis oceanica|type=mRNA|length=4330bp|location=Sequence derived from alignment at chr30:101992..106321+ (Nannochloropsis oceanica)
AATAGGGACACAGCCATGGAAGCCAACACCGATTCCGAGGATCTCCAGTC
CCTAATCGAGAAATCCCGGGCTGCGGGTGCTAAGAGAAAGGAGTCAATGG
GAAGCAAGAAATGTAAGTCGTGTCGGCATGTTCAAATCCCATCGCAACAA
CCACCGCACACCCTGACGAGTCTGTCAATTGACGGGGCCGCATGCAAACA
TTAGCACTTACGAAAAAGGAGGCGAAGGATGCGTGCGCAGTGTGCAGCTT
AACTACTCTATGTGCTAGCTCCACAAACAGCCATCGTCATCCTCCTCGTC
GTTCCATCCTTGCCACTCCACCTCTTTGCCTCCCGGTCCGAGAGCATACG
TATACACCCACCGCTTCCTTTATCCCACTTTCGTCTGATCTATTCCACTA
TCGTATCGTGCTTACACATCTACCTCTGGCCTTGGCTTGACCCGTTCTCT
TCCACCCCTCCACCCACCCACCTTCCCTACCTACGCCTTCAGCTGGTTCT
TATATCTCAGCACGTGCCCACCTTTTTCATTCCCCTATCCAATCCGACCG
CGTTCCCTCCCCCATTTGGCCCTCCCGAACTCCTCCACCACTGAGACCGA
CGTATTGGACGTTGCCACGCTACCAAGCCCTCTCCTCTTCCTCCATCGAC
TCTCCAATCGCTAAAACCATCATCGTATCCCTCTCGCCCTCCCGTCTCTT
CCACCCTCTTCCCATCCTGCCTCACCCTCTTCCCATCCTGCCTCCATCAC
AGCCTCCTACTCATCGCCTTTCAAGACCTCGCCGTTCAACTCCCTCTTCT
CTCTCTCTCCCTCCCTCCTTCCTTCCCTCCCTCCCTCTCTTCCTCTACCA
CAGCCTCCTCATCGCCTTTCAAGCACTCGCCTCTCAAGAATCTCTTTCGT
CGCCGCCTGTCGAAAAAGAGAGGAGCAGGTAAGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGAGAGAGGCACAGCAGGCTTTTTGGTCAAATTTCTTCC
TCTTCTCCGTCACAAACACAATAAATACACCTTCTTTCCCTCCCTCCCTC
TCCCCTCACCATCACAAACACAACATAGACACAAACTTAGGGCCCCAAGA
CAAACACCAAGACAACACTATGATTATTTCCTCCTCCTCCTCCTTCCCTT
CACCCTCCTCCTTTCCTTCCTCCTCCTCCTCCTCCTTCCCTTCACCCTCC
TCCTTTCCTTCCTCCTCCTCCTCCTCCTTCCCTTTCTCCTCCTCCTCCTT
TCCTTCCTCCTCCTCCTCCTTTCCTTCCTCCTCCTCCTTGCCTTCGGCCT
CTTCTTCCTTCCACCTCCCCTTTTCCTCCTCCTCCCCTCCCTCCCTCCCT
CCCTCCTATCCCCTTTCCGGCACACCAGCCTCCTTGTCATCGCCTTCCTC
CCGTCCCTCCCAAGGGGTCCATCCCACCAGCGTCGTCAGTAGTACGACAA
ACACTTCTACCACCAGCACCAGCACCAGCACCAGCAAAAACAACAGCACC
AGCAGCAGCGTCATTACCAGCAGTACGACCAGCACCTGTATCGGTAACAT
CAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCA
AACGGAGGAAGGGCGAGAAAGCCTCGCTGTGGGGAGGGCCGGGGGGGCTG
CTACTGTTGGCAGGGTCGACCTTTTGGGGCTTCATTTCCTCGTACTTCTT
GGTCATGCAGAGCGACCGACTCGCATCCCTGGAGCATGTGCAGGTGAAGG
GGGAGGGAGGGAAGGAAGGAAGGAGGGAGGGAGGGAGGGAGGGGTGTCAC
CATACTAGTATATGGCCTGTCAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGGTTTGTGTTACCAGCAAACGACCAGTCAACCGATCTACCCTCT
CCTTATCATTCACATCCTTGCATGACTCCCTCCCTCCCTCCCTCCCTCCC
TTGCACAGCCACAACAACATCCACATCATCAAGAAGCCTCCTCCTCCTCC
TCCTGCATGCTACCTCGGATCCCTCTCGCTTCCCTCCCTCTTCCCCTCCG
CTCCTTCCCGTCTCCCGTCGTCGTACTCCTCCCCGATCAGGAGGAGGGAG
TGGGGGAGAGAGGGAAGGAGGGAGGGCATAGAAAGTATGGAGGGGAGAAG
TCAGAAGTGGGAGGGAGGGAGGGCGGGAGGGAGGAAGCGCACTCGTATAA
CGCGGCGTTCCGGATGATGACGGAAAGGGAGAACTTACTACACAAGTACG
GGCACTTGGAGGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAG
GGAGGGAAGGCGGTGGGTGGAAGAACGTCGAAAATTGAAGATTGACGCTT
CCTTCCCTCCCTTCCTTCCTGTCCTCCCTTCCCCTCTTCCCTCCCTCCCT
CCCTCCCTCCCTTCCTTCCTAGGCCAAGCTGACAAGCAGCAACGCCTACA
GCCAAGGCGAGTCCCACAAAACGCTGCGGGAGTACCTGCAGGAAGAATGG
AGGGAGAGAGAGAGGAGGGGAGGGAGGGAGGGAGGGAGGGGAGCGAACGA
CACGATGTACTTGTTCGGAAATACATTTGGGGAGGAGGTAGGGTGGGAAA
AACGGACAAAGAGAGGGAGGGAGAGAGGGAGGGAGGCAGGGAGAGAGAGA
GGAGGCTTGATGTCACCGTCTAACGTTACATCTGATGGCCTCCCTGCCTC
CCTCCCTCCTTCCCTCCCTCCCTCCCTCCTAAGTGGGCCTCCTTTTTGTC
GCACTACCAACGCCCTCCTTGCCGGACTTGCTCCGACCCCGACGGGGCCT
TGAGGTGGTTAAACCCTCCCTCCCTCCCTCCTTCCCTCTCTCTCTTTCCT
CCCTCCCTCCCTCCTTCTCTCTCTTTCCTCCCTCCCTCTCTCTCTTTCCT
TCCTCTCTCCCTCTCTCCCTCCCTCTCTCCCTGCCTCCCTTCCTCCTTCC
CTCCCTCTCCCCCTCTCACTCTTTCCTCCCTCCCTCCCTATTTCCTCTCT
CTCTCACTTCCTCCCCGCTTCCCCTCCCCCCCTCCTTCTTTTCCTCCCTC
CCTCCCTCCCTCCCTCCCTTCCTCTTCCACCAGCTTCGGCCTCGGTCCTC
GTCATTCCGGCGTTTCCTGGCACATCCACGGCCCGGGCTACAGCGAGGTA
CGGACGGAGGGAGGGAGGGAAGATGGAGAGGACAGCGACGAAAAAGACAG
GACTCACACCACACCCCTCCATCCCATCCCTCCCATCCCTCCCATCCCTC
CCATCCCTCCCTCCCTCCCTCCCTCCCTCCTTAGGTGCTGCACGGACGGA
AGAGGTGGTTTCTCTACCCCCCTTCGTCCTCCCCTCCTCCCTCCTTCCAT
CCTAACATGAGCAGCCTCCAATGGCAAGAGCATGTACTGCCCACGCTGGG
AGGAGAAGGAGGAGGAGGAAGGAGAGAGAAAGGGAGGGAGGAAGAAGGAT
CTGGCATGGTCGTTGAAGACGGCGAGGTACGGGAGAGGAAGGCAGGAGAG
TAGGGAGAGAGGGAAGGAGGGAGGAAGGGAGGGAAGGAAGGGAAAGAAGG
AGAGGGAGAGAGGGAGGGGGGGAGGGAGGGCGAAAGGCTGTTGTCAGAAG
CATGGGTAGATGGAAGCGGCCTCCACTTCCTTCCCTCCCTCCTTCACTCT
CCCCCTCCCTTTCTTCCCTCCTCTCTCCCTCCCTCCTGCTTTGGAAGTAG
TCTCATCTTACGAAGCAGCGCAGAATCATTCCCCTTCCCTCACTCCTTCC
CTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCGTAGGAGATATGCCTAGA
GGCAGGAACGAACGCCATGCCCTTCATCTGCGACATCGGCCCGGGGGAAA
TACTGGTGAGGGAGCGATGTATCAAAGCAAAGCTGTCAATATGATCAGAG
GCTAGGCCATGGTGGTAATCAATCTCACCAAAGAGTCACATCAAATACGG
CGTGGAATACACAAATCGAATCATTCCCCTCTTACCCCCACCCATCTTCT
CCTCCCTGCCTCTTTCCCCTTCCTCAGCACTTTCCGTCCATGTGGTGGCA
CGCGGTTCTCAACCTGGAGGACTACAACGTCTTCGTCTCCACCTTCACCC
AGGAGTAGGACAAGGGAGGGAGGAAGGGAGGGAGCGATAAAAAAGAGGGG
CATCACACCAACGAAGCAATGAAGCGAGGGAGGGGGAAAGGTGGGAGGGA
GGGAGCATGAGGAGGTTGTTTGTCCATTTTCAAATGTATACAAGGCTCGA
AGAAAACGCGGGTATAATAATGAGAAAGACCTTGAGCAGATCGATGGTTG
CGATGGAGAAACATGCTCATTTGGCTGGTG back to topCoding sequence (CDS) from alignment at chr30:101992..106321+ >NO30G00230.6 ID=NO30G00230.6|Name=NO30G00230.6|organism=Nannochloropsis oceanica|type=CDS|length=1740bp|location=Sequence derived from alignment at chr30:101992..106321+ (Nannochloropsis oceanica)
ATGGAAGCCAACACCGATTCCGAGGATCTCCAGTCCCTAATCGAGAAATC
CCGGGCTGCGGGTGCTAAGAGAAAGGAGTCAATGGGAAGCAAGAAATCCT
CCTCATCGCCTTTCAAGCACTCGCCTCTCAAGAATCTCTTTCGTCGCCGC
CTGTCGAAAAAGAGAGGAGCAGACACAAACTTAGGGCCCCAAGACAAACA
CCAAGACAACACTATGATTATTTCCTCCTCCTCCTCCTTCCCTTCACCCT
CCTCCTTTCCTTCCTCCTCCTCCTCCTCCTTCCCTTCACCCTCCTCCTTT
CCTTCCTCCTCCTCCTCCTCCTTCCCTTTCTCCTCCTCCTCCTTTCCTTC
CTCCTCCTCCTCCTTTCCTTCCTCCTCCTCCTTGCCTTCGGCCTCTTCTT
CCTTCCACCTCCCCTTTTCCTCCTCCTCCCCTCCCTCCCTCCCTCCCTCC
TATCCCCTTTCCGGCACACCAGCCTCCTTGTCATCGCCTTCCTCCCGTCC
CTCCCAAGGGGTCCATCCCACCAGCGTCGTCAGTAGTACGACAAACACTT
CTACCACCAGCACCAGCACCAGCACCAGCAAAAACAACAGCACCAGCAGC
AGCGTCATTACCAGCAGTACGACCAGCACCTGTATCGGTAACATCAGCAG
CAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACGGA
GGAAGGGCGAGAAAGCCTCGCTGTGGGGAGGGCCGGGGGGGCTGCTACTG
TTGGCAGGGTCGACCTTTTGGGGCTTCATTTCCTCGTACTTCTTGGTCAT
GCAGAGCGACCGACTCGCATCCCTGGAGCATGTGCAGCCACAACAACATC
CACATCATCAAGAAGCCTCCTCCTCCTCCTCCTGCATGCTACCTCGGATC
CCTCTCGCTTCCCTCCCTCTTCCCCTCCGCTCCTTCCCGTCTCCCGTCGT
CGTACTCCTCCCCGATCAGGAGGAGGGAGTGGGGGAGAGAGGGAAGGAGG
GAGGGCATAGAAAGTATGGAGGGGAGAAGTCAGAAGTGGGAGGGAGGGAG
GGCGGGAGGGAGGAAGCGCACTCGTATAACGCGGCGTTCCGGATGATGAC
GGAAAGGGAGAACTTACTACACAAGTACGGGCACTTGGAGGCCAAGCTGA
CAAGCAGCAACGCCTACAGCCAAGGCGAGTCCCACAAAACGCTGCGGGAG
TACCTGCAGGAAGAATGGAGGGAGAGAGAGAGGAGGGGAGGGAGGGAGGG
AGGGAGGGGAGCGAACGACACGATGTACTTGTTCGGAAATACATTTGGGG
AGGAGTGGGCCTCCTTTTTGTCGCACTACCAACGCCCTCCTTGCCGGACT
TGCTCCGACCCCGACGGGGCCTTGAGCTTCGGCCTCGGTCCTCGTCATTC
CGGCGTTTCCTGGCACATCCACGGCCCGGGCTACAGCGAGGTGCTGCACG
GACGGAAGAGGTGGTTTCTCTACCCCCCTTCGTCCTCCCCTCCTCCCTCC
TTCCATCCTAACATGAGCAGCCTCCAATGGCAAGAGCATGTACTGCCCAC
GCTGGGAGGAGAAGGAGGAGGAGGAAGGAGAGAGAAAGGGAGGGAGGAAG
AAGGATCTGGCATGGTCGTTGAAGACGGCGAGGAGATATGCCTAGAGGCA
GGAACGAACGCCATGCCCTTCATCTGCGACATCGGCCCGGGGGAAATACT
GGTGAGGGAGCGATGTATCAAAGCAAAGCTGTCAATATGA back to top
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