NO29G00120, NO29G00120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00120 vs. NCBI_GenBank
Match: EWM21237.1 (choline dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 203.4 bits (516), Expect = 2.300e-48 Identity = 95/115 (82.61%), Postives = 105/115 (91.30%), Query Frame = 0 Query: 66 PKYIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWNEWWRIEDIEE 181 PKYIIVGAGPAGCALAAAL KGQ+G VVM+ERGKE++ RFV KVNDWVKASLRSW+AV YL+VPH HL NRQFVTPRGQGKGGTALINAMQYSRGYRKDY+ W EWW++E+IEE Sbjct: 16 PKYIIVGAGPAGCALAAALAKGQQGKVVMVERGKEKVHTRFVTKVNDWVKASLRSWNAVQYLSVPHRHLGNRQFVTPRGQGKGGTALINAMQYSRGYRKDYQAWEEWWKMEEIEE 130
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_021594184.1 (hypothetical protein [Actinomadura madurae]) HSP 1 Score: 193.4 bits (490), Expect = 2.400e-45 Identity = 185/592 (31.25%), Postives = 256/592 (43.24%), Query Frame = 0 Query: 68 YIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWN-EWWRIEDIEESYEYVEQKLRAAGALTEGSSSLV-----------REAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEY-MDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAP--RACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSV-TPDL------LPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLG----KVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRII 634 Y+IVGAG AGCALAA L + V +LE G + +G +H + K ++ Y T P A L+ R+ PRG+ GG++ +NAM + RG+ DY DW+ W ED+ ++ VE + + G+S V AF A A GL Y LTP + KR R S +A L+P A++ PNL+ + AQ TR+ G RA G+E+ + T + V+L SGIGDPEHL GI V P VG+ LQDHL R C + L + Y + R+G L + TSD S+ PDL +P IA L P P +T LG + ++ P S G + L+SADPA PP++DPAYLS D+ L G++ A +LL E L P+ G M P +L Y + A + YHP +CR+G VV+ DLRV V GLRVAD S+LP++ A +MIG++A +I Sbjct: 5 YVIVGAGSAGCALAARLSEDASVTVALLEAGGPDDKGE-IHVPAAFPKL-FKTECDWDYSTAPQAGLDGRELYWPRGRMLGGSSSLNAMMWVRGHYDDYDDWDIPGWSYEDVVPYFKRVEGRAGSNAGDVYGTSGPVTISEQRSPNPTTRAFLDACAAAGL-------------KRRPELNGPSNEGYALTPVS--------------QKRGRRCSAADAYLRP---ARKRPNLTVVTGAQVTRIFVEDG-------RATGVEHGGERVTARREVVL------------SAGAVGSPHLLMLSGIGDPEHLRGAGIEPVVESPGVGRHLQDHLSVAVLRHCPEKITLADAGSLRDVARY---LIARRGPLTSNVGEAVVFTTSDPSLHAPDLELIFAPVPYIAHGLTP---------------------PAEHGVT---LG--VVLLQPESAGRITLSSADPAAPPVIDPAYLSREDDLRRLMVGVRRAEELLGAEALKPYAGDPMEPYTGAEDEEALA---RYVRGHAETLYHPTGTCRMGTGADSVVDPDLRVRGVDGLRVADVSVLPQITRGHTNAPAIMIGEKAADLI 513
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_008737090.1 (choline dehydrogenase [Alcanivorax pacificus] >AJD48676.1 GMC family oxidoreductase [Alcanivorax pacificus W11-5]) HSP 1 Score: 182.2 bits (461), Expect = 5.500e-42 Identity = 183/608 (30.10%), Postives = 252/608 (41.45%), Query Frame = 0 Query: 64 SKPKYIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVH---KVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWN-------EWWRIEDIEESYEYVEQKLRAAGALTEGSSSLVR--------EAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHL-----LAPRACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQF---LGCMI--CIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLGK----VVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRIILGSRGR 640 SK +IIVGAG AGC LA L +G + V ++E G + G FV+ V +K R+W Y T HL NR+ PRG+ GG++ INAM Y RG +DY DW +W + I ++E E + G ++ R F +A ++G Y D P + + K R S A L P A+ NL L TRVL G RA G+E DSA G+ S + SG+GD EHL +GI P VG LQDHL + R SR G P + + + R R + S+ + + ++ P P L L F+R R+ GC I C + P S+G +RLAS DP PL+DP YLSHP D+ L +G+KLA + +E +P G + P + + + + A + YHP +CR+G VV+ LRV V GLRVADASI+P + S A+CMMIG++A R IL +GR Sbjct: 2 SKYDFIIVGAGSAGCVLANRLSEGGRYRVCLIEAGPHDNSG-FVNVPFGVIGLIKEGKRNW---GYYTSEQKHLGNRKLYWPRGKTLGGSSSINAMVYIRGQHQDYDDWAAEGASGWDWESVRPIFNAHENNEHYPADSWHGVGGPLNVTRVRDINPLTPLFVKAGEELG---------------------------YPRNDDFNGPEQAGFGLFQVTQKDGRRWSAARAFLDP---ARARENLHILTDTLVTRVLIDSG-------RATGVEVCDSA-GKISTI-----EASAEVILAGGAINSPQLLMLSGVGDREHLAEVGIACQHHAPEVGGNLQDHLDMTIMVKDR---SRQAIGMSPFFVPRLIRAFYDYFRH---------RRGFLASNAAEAGAFVSVLSEPSRP-------------DVQLHFLPAFLRDHGRELTPGFGCTIHVCQLRPKSRGRIRLASKDPLAAPLIDPNYLSHPDDMAVLREGVKLARKVFHSEAFSPAFGGDDQPDVSIVSDADIEKDI---RARAETIYHPVGTCRMGNDNQAVVDTRLRVNGVRGLRVADASIMPLIISGNTNASCMMIGEQAARFILEEQGR 534
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_067458802.1 (choline dehydrogenase [Actinomadura macra]) HSP 1 Score: 181.4 bits (459), Expect = 9.300e-42 Identity = 176/598 (29.43%), Postives = 252/598 (42.14%), Query Frame = 0 Query: 68 YIIVGAGPAGCALAAALVKGQKGMVVMLERG----KEELQ-----GRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWN-EWWRIEDIEESYEYVEQKL--------RAAGALT---EGSSSLVREAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEY-MDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAP--RACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRW----LTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRL----GKVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRII 634 Y+IVGAG AGCALAA L + V +LE G K E++ + DW Y TV L R+ PRG+ GG++ +NAM ++RG+R DY W+ W +D+E + +E ++ +G +T + S + AF A A GLT L P+ P KR R S +A L P A R PNL+ + A +RVL G RA G++Y + T + V+L SGIGDP+HL G+ V LP VG+ LQDHL R C + + L PN + V+R+G + +D ++T + I P PFV T + + ++ P S G + LASADPA PP +DP YL+H D+ L G++ A +LL TEPL ++G M P + +L Y + + + YHP +CR+ G VV+ LRV + GLRVAD S+LP++ A +MIG+RA +I Sbjct: 5 YVIVGAGSAGCALAARLSEDASVRVALLEAGGPDDKSEIRVPAAFSKLFKTECDW-----------DYTTVKQPELGGRELYWPRGKVLGGSSSLNAMMWTRGHRDDYDGWDVPGWAYDDVEPYFRRLEGRVGRNEGGVYGTSGPVTISEQRSPNQTTRAFLAACAARGLTRL---------------------------PELNGPSNEGYAQSPVSQKRGRRWSSADAYLHP---AGRRPNLAVVTGAHVSRVLVEDG-------RAVGVDYGGERVTARREVVL------------SAGAVGSPHLLMLSGIGDPDHLREAGVEPVLDLPEVGRHLQDHLSVAVIRRCPRKVTLTGAESL-PNIIR--YLVLRRGPFTSNLGEAVIFTRTDPALTAPDIELIFAP-----------------------APFVAHGLTPPTEHGVTVGVVLLRPGSAGRITLASADPADPPAIDPGYLTHEDDLNRLMFGVRYAEELLATEPLKAYVGDCMEPYESAEDDEALA---RYIRGHSETLYHPTGTCRMGADAGSVVDPSLRVRGIDGLRVADVSVLPQITRGHTNAPAIMIGERAADLI 513
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_022956395.1 (FAD-binding protein [Perlucidibaca piscinae]) HSP 1 Score: 180.6 bits (457), Expect = 1.600e-41 Identity = 179/597 (29.98%), Postives = 248/597 (41.54%), Query Frame = 0 Query: 68 YIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVH---KVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWNE-------WWRIEDIEESYEYVEQKLRAAGALTEGSSSLVR--------EAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAY--APMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHL--LAPRACFSRPPAGQRQQLAPNSMYGWVNVIR--KGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQFLGCM--ICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLGK----VVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRIIL 635 +I+VGAG AGC LA L + K V ++E G + G FV+ V ++ R+W Y T P + L NR+ PRG+ GG++ INAM Y RG DY DW + W ++ + ++E EQ L G ++ R F +A ++G Y D + A R Q K R S A L P AK PNL+ + TRVL +G RA GIE +D A G+T L SGIGD +HL +GI + P VG+ LQDHL SR G P + + + +R +G L + + PD+ +P + L R LT F GC +C + P S+G + L DP PL+DP YLS D+ L +G+KL L QT+ AP G E LP + L + + + + YHP +CR+G+ VV+ LRV +SGLRVADAS++P L S A CMMIG+RA +L Sbjct: 7 FIVVGAGSAGCVLANRLSESGKFSVCVVEAGPHDNSG-FVNVPFGVIGLIREGKRNW---GYYTAPQSELGNRRLYWPRGRTLGGSSSINAMVYIRGQHLDYDDWQDAGAAHWGWQQVRPVFNAHENNEQYLPDDWHGRGGPLNVTRVTDPNPLSAMFVRAGVELG----------------------------YPENDDFNGASQMGFGRFQVTQ-KDGRRWSAARAFLDP---AKARPNLTIMTDMLVTRVLVDNG-------RARGIECLD-AQGKTVTLTCQ-----REVVLSGGAINSPQLLMLSGIGDRQHLEEIGIRCIVDSPQVGRNLQDHLDMTVSIRDKSRQSIGFSPFFLPRLIRAFYDYVRHKRGFLASNAAEAGAFLNVGGGARPDIQLHF-IPAF--------------------LRDHGRELTPGF-GCTVHVCQLRPRSRGYICLQDNDPRSAPLIDPRYLSDQDDIRVLREGVKLVRRLFQTDAFAPAFGGEDLPPATVKTDAQLDEDIRQR---SETIYHPVGTCRMGEDRLAVVDSQLRVKGISGLRVADASVMPLLISGNTNAPCMMIGERAAGFML 529
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_067897639.1 (choline dehydrogenase [Actinomadura chibensis]) HSP 1 Score: 180.6 bits (457), Expect = 1.600e-41 Identity = 174/595 (29.24%), Postives = 257/595 (43.19%), Query Frame = 0 Query: 68 YIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWN-EWWRIEDIEESYEYVEQKLRAAGALTEGSSSLV-----------REAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEY-MDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHLL--APRACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRW----LTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLG----KVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRIILGSRGR 640 Y+IVGAG AGCALAA L + V +LE G + + +H V ++ + + TV A L+ R PRG+ GG++ +NAM + RG+ DY W+ W +D+E + E ++ + G+S V AF A A GL L Y LTP + +R R S +A L+P A+R PNL+ + AQ RVL G RA G+EY + T + V+L SG+GDP++L +G+ V P+VG+ LQDHL R C + L + Y ++R+G + SD ++ L + P PFV T + + ++ P S G V LASA PA P +DPAYL+ +D+ L +G++ A +LL EPL P++G M P + + SL Y + + + YHP +CR+G VV+ DLRV V+GLRVADAS+LPR+ A +MIG++A +I ++ R Sbjct: 5 YVIVGAGSAGCALAARLSEDASVTVALLEAGGPDDKSE-IH-VPAAFPRLFKTEYDWDFTTVRQAELDGRGLYWPRGKMLGGSSSMNAMMWVRGHAADYDGWDVPGWTYDDVEPYFRRAEGRVGSNDGGVYGTSGPVTISEQRSPNEATRAFLAACAASGLARL-------------PELNGPSNEGYALTPVS--------------QRRGRRCSAADAYLRP---ARRRPNLTVVTGAQVARVLIEDG-------RATGVEYGGERVTARREVVL------------SAGAIGSPHLLMLSGVGDPDNLREVGVEPVVERPAVGRHLQDHLAVGVVRRCPRAVTLAGAESLPNVARY---LLLRRGPFTSNVGEAVVFTKSDPALQAPDLELVFAP-----------------------APFVGHGLTPPTEHGVTVGVVLLQPESSGRVALASAAPAAAPTIDPAYLTSDRDLRVLMRGVRRAEELLAAEPLKPYIGPPMDPYTGADGDASLA---GYIRRTSETLYHPTGTCRMGTDGDAVVDPDLRVRGVAGLRVADASVLPRITRGHTNAPAIMIGEKAADLIKQAKAR 519
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_019577346.1 (hypothetical protein [Curvibacter lanceolatus]) HSP 1 Score: 179.5 bits (454), Expect = 3.500e-41 Identity = 189/615 (30.73%), Postives = 252/615 (40.98%), Query Frame = 0 Query: 55 ASSFPSAAASKPKYIIVGAGPAGCALAAALVKGQ-KGMVVMLERGKEELQGRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWN----EWWRIEDIEESYEYVEQKLRAAGALTEGSSSLVREAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQ--PLLDAKRA-------PNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDS-----ATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHL-------LAPRACFSRPPAGQRQQLA--PNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLG----KVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRIILGSR 638 A + P+ + + YI+VGAGPAG ALA L +G V+++E G + V + R+ H Y TVP A L R PRG+G GG++LINAM Y RG R+DY W W D+ + E R G + EA + ++ L A A C L R V ++ Q LDA RA PNL L + + RV F +GR RA G+E D T + V+L SGIG + L LGIP+VA P VGQ LQDHL L F P G + LA P G + G+ E + +S PDL V R + +C + P S+G VRLASA+PA PL+DPA+LSHP D+ L QG++LA +L++ P A LG + G L + + AL + + + YHP +CR+G V++ LRV VSGLRVADASI+P L S A MIG+RA +IL R Sbjct: 2 AQTTPNTTSLQADYIVVGAGPAGSALATRLAEGDPAAQVLLIEAGPAKPSFLSVMPAGLALLVPSRNRHNYAYQTVPQAGLGGRTGYVPRGRGLGGSSLINAMIYVRGQREDYDGWAALGCPGWGWSDVLPFFRRSEANQRPGG---------LDEALHGRQGPLVVSDLASPSPVSQAFV------------------AAAQACGLPANADFNGARQEGVGLYQVFQQGGRRLDASRAYRGRAPQPNLQVLAEVRVNRVCF----EGR---RATGVEVADRDGVRVLTARREVIL------------SAGAIASPQLLCLSGIGPADELARLGIPLVADAPQVGQNLQDHLDYSLNLRLNGPGLFGWGPRGTLRSLAALPAFRQGRGFLTTNGA-----EAGGFVRSSPQLERPDLQLHFCVSNVDDHGR--------------------RKHLATGVALHVCALRPHSRGSVRLASANPADMPLIDPAFLSHPDDLPLLIQGVRLARRILRSPPFAG-LGGRPIYGTLDDESDDALAALIRAQ--SDTIYHPVGTCRMGTDPASVLDPALRVRGVSGLRVADASIMPTLVSGNTQAPSAMIGERAADLILKGR 542
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_097253718.1 (choline dehydrogenase [Streptomyces sp. Ag109_G2-15] >SOD85453.1 choline dehydrogenase [Streptomyces sp. Ag109_G2-15]) HSP 1 Score: 177.6 bits (449), Expect = 1.300e-40 Identity = 169/588 (28.74%), Postives = 237/588 (40.31%), Query Frame = 0 Query: 68 YIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVHKVNDWVKASLRSW----HAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDW----NEWWRIEDI------EESYEYVEQKLRAA----GALTEGSSSLVREAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAPRACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRL----GKVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRII 634 Y++VGAG AGC +AA L++ +++LE G + VH+ + + + + W Y TVP A L R P+G+ GG + +NAM Y RG R+D+ W NE W ED+ ESYE + R A + + V AF AA ++G Y Y + K + T V A L P+L P L+ + A ATR++ G RAAG+EY+ T+V + SGIG L GI V LP VGQ LQDHLL F R+ AP + L T+ D +P + P +L P S+G V LASADP PP+VDP YL +D+E L +G+ LA +L T L PF G+E+ PG TS + Y + A + +HP +CR+ G VV+ LRV V GLR+ADAS++P + + AA +MIG++A +I Sbjct: 9 YVVVGAGSAGCVVAARLLQRTDARILLLEAGGAD-DAEAVHRTD--IPSMVSLWGPQGTVWGYETVPQAGLGGRTIPVPQGRMLGGGSSVNAMMYVRGNRRDFDGWRDLGNEGWGYEDVLPYFRRSESYEEGASRYRGADGPLSVVPYARPAEVSRAFVAAAGELGF---------------------DRPGDYNAERQENTAFFYQSTRTKDDRRASTAV----AYLHPVLG---DPRLTVVTGATATRLVLRGG-------RAAGVEYLRDGERHTAVATAE-------VVLSAGALATPRLLLLSGIGPAAELRGHGIDPVVDLPGVGQNLQDHLL-----FGVAYESPRELPAPELL-----------------AEAGLFTTARPTGEDDVPDLQYFFGPVQFVDERYKTDAPGFTFAPIL-----------------ARPRSRGTVTLASADPLAPPVVDPHYLEAEEDLEVLVRGITLARELAHTRALTPFRGRELAPG---VDVTSPGELARYVRESASTVWHPVGTCRMGLDGGSVVDARLRVHGVDGLRIADASVMPAITTGNTNAAVVMIGEKAADLI 509
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_101417952.1 (choline dehydrogenase [Streptomyces sp. 73] >PKV57467.1 choline dehydrogenase [Streptomyces sp. 73]) HSP 1 Score: 177.6 bits (449), Expect = 1.300e-40 Identity = 169/588 (28.74%), Postives = 237/588 (40.31%), Query Frame = 0 Query: 68 YIIVGAGPAGCALAAALVKGQKGMVVMLERGKEELQGRFVHKVNDWVKASLRSW----HAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDW----NEWWRIEDI------EESYEYVEQKLRAA----GALTEGSSSLVREAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAPRACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRL----GKVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRII 634 Y++VGAG AGC +AA L++ +++LE G + VH+ + + + + W Y TVP A L R P+G+ GG + +NAM Y RG R+D+ W NE W ED+ ESYE + R A + + V AF AA ++G Y Y + K + T V A L P+L P L+ + A ATR++ G RAAG+EY+ T+V + SGIG L GI V LP VGQ LQDHLL F R+ AP + L T+ D +P + P +L P S+G V LASADP PP+VDP YL +D+E L +G+ LA +L T L PF G+E+ PG TS + Y + A + +HP +CR+ G VV+ LRV V GLR+ADAS++P + + AA +MIG++A +I Sbjct: 9 YVVVGAGSAGCVVAARLLQRTDARILLLEAGGAD-DAEAVHRTD--IPSMVSLWGPQGTVWGYETVPQAGLGGRTIPVPQGRMLGGGSSVNAMMYVRGNRRDFDGWRDLGNEGWGYEDVLPYFRRSESYEEGASRYRGADGPLSVVPYARPAEVSRAFVAAAGELGF---------------------DGPGDYNAERQENTAFFYQSTRTKDDRRASTAV----AYLHPVLG---DPRLTVVTGATATRLVLRGG-------RAAGVEYLRDGERHTAVATAE-------VVLSAGALATPRLLLLSGIGPAAELRGHGIDPVVDLPGVGQNLQDHLL-----FGVAYESPRELPAPELL-----------------AEAGLFTTARPTGEDDVPDLQYFFGPVQFVDERYKTDAPGFTFAPIL-----------------ARPRSRGTVTLASADPLAPPVVDPHYLEAEEDLEVLVRGITLARELAHTRALTPFRGRELAPG---VDVTSPGELARYVRESASTVWHPVGTCRMGLDGGSVVDARLRVHGVDGLRIADASVMPAITTGNTNAAVVMIGEKAADLI 509
BLAST of NO29G00120 vs. NCBI_GenBank
Match: WP_043330193.1 (GMC family oxidoreductase [Curvibacter gracilis]) HSP 1 Score: 177.2 bits (448), Expect = 1.800e-40 Identity = 188/610 (30.82%), Postives = 251/610 (41.15%), Query Frame = 0 Query: 55 ASSFPSAAASKPKYIIVGAGPAGCALAAALVKGQ-KGMVVMLERGKEELQGRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKGGTALINAMQYSRGYRKDYRDWN----EWWRIEDIEESYEYVEQKLRAAGALTEGSSSLVREAFEQAAAQIGLTVLXXXXXXXXXXXXXXXXXXXXXXXYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQ--PLLDAKRA-------PNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDSATGQTSVLLLDXXXXXXXXXXXXXXXXXXXXXXXSGIGDPEHLTALGIPVVASLPSVGQGLQDHL-------LAPRACFSRPPAGQRQQLA--PNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPXXXXXXXXXXXXXXXXLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLG----KVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRIILGSR 638 A + P+ + + YI+VGAGPAG ALA L +G V+++E G + V + R+ H Y TVP A L R PRG+G GG++LINAM Y RG R+DY W W D+ + E R G + EA + ++ L A A C L R V ++ Q LDA RA PNL L + + RV F +GR RA G+E D + V +L SGIG + L LGIP+VA P VGQ LQDHL L F P G + LA P G + G+ E + +S PDL V R + +C + P S+G VRLASA+PA PL+DPA+LSHP D+ L QG++LA +L++ P A LG + G L + + AL + + + YHP +CR+G V++ LRV VSGLRVADASI+P L S A MIG+RA +IL R Sbjct: 2 AQTTPNTTSLQADYIVVGAGPAGSALATRLAEGDPAAQVLLIEAGPAKPSFLSVMPAGLALLVPSRNRHNYAYQTVPQAGLGGRTGYVPRGRGLGGSSLINAMIYVRGQREDYDGWAALGCPGWGWSDVLPFFRRSEANQRPGG---------LDEALHGRQGPLVVSDLASPSPVSQAFV------------------AAAQACGLPANADFNGARQEGVGLYQVFQQGGRRLDASRAYRGRAPQPNLQVLAEVRVNRVCF----EGR---RATGVEVGD----RDGVRVL---AARREVILSAGAIASPQLLCLSGIGPADELARLGIPLVADAPQVGQNLQDHLDYSLNLRLNGPGLFGWGPRGTLRSLAALPAFRQGRGFLTTNGA-----EAGGFVRSSPQLERPDLQLHFCVSNVDDHGR--------------------RKHLATGVALHVCALRPHSRGSVRLASANPADMPLIDPAFLSHPDDLPLLIQGVRLARRILRSPPFAG-LGGRPIYGTLDDESDDALAALIRAQ--SDTIYHPVGTCRMGTDPASVLDPALRVRGVSGLRVADASIMPTLVSGNTQAPSAMIGERAADLILKGR 542 The following BLAST results are available for this feature:
BLAST of NO29G00120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00120 ID=NO29G00120|Name=NO29G00120|organism=Nannochloropsis oceanica|type=gene|length=5971bpback to top protein sequence of NO29G00120.3 >NO29G00120.3-protein ID=NO29G00120.3-protein|Name=NO29G00120.3|organism=Nannochloropsis oceanica|type=polypeptide|length=727bpback to top protein sequence of NO29G00120.2 >NO29G00120.2-protein ID=NO29G00120.2-protein|Name=NO29G00120.2|organism=Nannochloropsis oceanica|type=polypeptide|length=682bpback to top protein sequence of NO29G00120.1 >NO29G00120.1-protein ID=NO29G00120.1-protein|Name=NO29G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bpback to top Synonyms
Publications
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