NO29G00120.1, NO29G00120.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO29G00120.1
Unique Name	NO29G00120.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3601
Alignment location	chr29:44357..51390 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr29	genome	chr29:44357..51390 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO29G00120.1 vs.
Match: WP_021594184.1 (hypothetical protein [Actinomadura madurae])

HSP 1 Score: 172.2 bits (435), Expect = 5.400e-39
Identity = 159/503 (31.61%), Postives = 219/503 (43.54%), Query Frame = 0

Query:    1 MQYSRGYRKDYRDWN-EWWRIEDIEESYEYVEQKLRAAGALTEGSSSLVR-----------EAFEQAAAQIGLTVLPPASSSSSSSSSSSSSSPPSPSPYYLTPDAYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHGGKGRRLPRAAGIEYMDSATGQTSVLLLDEADDEAEVILCCGAIDTPRLLLLSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAP--RACFSRPPAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSV-TPDL------LPQIAVPLYPGLWYGLLRACLTACLSLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLG----KVVNKDLRVFHVSGLRVADASILPRLGSAGPLAACMMIGDRAGRII 479
            M + RG+  DY DW+   W  ED+   ++ VE +  +      G+S  V             AF  A A  GL   P  +              PS   Y LTP +               KR  R S  +A L+P   A++ PNL+ +  AQ TR+    G       RA G+E+             +      EV+L  GA+ +P LL+LSGIGDPEHL   GI  V   P VG+ LQDHL     R C  +        L   + Y    + R+G L       +   TSD S+  PDL      +P IA  L P   +G+                         LG  + ++ P S G + L+SADPA PP++DPAYLS   D+  L  G++ A +LL  E L P+ G  M P        +L     Y +  A + YHP  +CR+G     VV+ DLRV  V GLRVAD S+LP++      A  +MIG++A  +I
Sbjct:   91 MMWVRGHYDDYDDWDIPGWSYEDVVPYFKRVEGRAGSNAGDVYGTSGPVTISEQRSPNPTTRAFLDACAAAGLKRRPELNG-------------PSNEGYALTPVS--------------QKRGRRCSAADAYLRP---ARKRPNLTVVTGAQVTRIFVEDG-------RATGVEHGG-----------ERVTARREVVLSAGAVGSPHLLMLSGIGDPEHLRGAGIEPVVESPGVGRHLQDHLSVAVLRHCPEKITLADAGSLRDVARY---LIARRGPLTSNVGEAVVFTTSDPSLHAPDLELIFAPVPYIAHGLTPPAEHGVT------------------------LG--VVLLQPESAGRITLSSADPAAPPVIDPAYLSREDDLRRLMVGVRRAEELLGAEALKPYAGDPMEPYTGAEDEEALA---RYVRGHAETLYHPTGTCRMGTGADSVVDPDLRVRGVDGLRVADVSVLPQITRGHTNAPAIMIGEKAADLI 513

The following BLAST results are available for this feature:

BLAST of NO29G00120.1 vs.

BLAST of NO29G00120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
WP_021594184.1	5.400e-39	31.61	hypothetical protein [Actinomadura madurae]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO29G00120	NO29G00120	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO29G00120.1	NO29G00120.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO29G00120.1.cds1	NO29G00120.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds2	NO29G00120.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds3	NO29G00120.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds4	NO29G00120.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds5	NO29G00120.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds6	NO29G00120.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds7	NO29G00120.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds8	NO29G00120.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds9	NO29G00120.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds10	NO29G00120.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds11	NO29G00120.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds12	NO29G00120.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds13	NO29G00120.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds14	NO29G00120.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds15	NO29G00120.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00120.1.cds16	NO29G00120.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr29:44357..51390-
coding sequence from alignment at chr29:44357..51390-

mRNA sequence

>NO29G00120.1 ID=NO29G00120.1|Name=NO29G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=3601bp
AGGCGATAGCATGTCTCTGTGCCTATTTGGTGGGCAGTGTACGTTAGAGA
GCGGCGCCGGGTATTGACATTCCGGGCACCCAGCAAGACCCGGGTAAAAA
CCCGGATAAAACCCACACAGGTAATGATTTTCAACTGGATACCCTGGCAC
CCGGAATAACGATGGCGTAAAAACGAGAGGAACGGAAAGGGCAGGGGAAA
AGGAAAAGACAGAAGGGAAGAGAAAAGTCATGAAGCCCTTGATTTACGCG
TTACCAAGTGATTCGGCGCGACCCCATGAGCGGAGGCCCTTGTACCCAAT
TTCCCCATACATACCCCCCCTCCCTCACAGACACCCTTCACGGGGTTTGT
CCGGACAGACTTTCGGAGAAGCCGGGTCTGCCCGGGTAGGAAAAGTGCTG
CTGCCGGGTGCGGCTGTACGTAGGTCAATGCTAAGCAACGTGAGCTAAGG
ACGATTTGAATTCAGCGAGGCTGACCGGCGGCGGCTGTTTCGCGTCCCTT
ATGCGCGTCATGGGGCGCTTTCCCACACCCACACCCACACAATGCACACG
TATACAGGCGCGCAGGGGGCAAATCAACAGCCTAGCGCATTCAGCCTCAG
TCCTCATTCTCCATTTCTGCAGCACCCAAGTCGCGTAAACCAAGATCGCA
AGCCAAGCCTAGCCGAGAATCCCATCGCTCGCATCATGATGGTCGAACCT
CCTGCCTCCTCTTTCCCCTCTGCCGCAGCTTCCAAACCCAAGTATATAAT
CGTCGGCGCAGGGCCTGCAGGCTGTGCCTTGGCAGCCGCCCTCGTGAAAG
GTCAGAAAGGGATGGTGGTAATGCTGGAGCGTGGCAAGGAAGAGCTGCAA
GGCCGGTTCGTCCACAAGGTCAACGACTGGGTTAAGGCTTCCCTCCGCTC
CTGGCATGCTGTGCACTATCTCACTGTCCCTCACGCCCACCTGAACAACC
GGCAATTTGTTACCCCACGCGGACAAGGCAAAGGGGGCACCGGTGAGTTT
GGATGCTCCAAGCCCTCCCCTCCCGGTCAAGAGGGGGGAGGAAAGTACCT
CCTTTCTTCATCCATTCTTCTCTACTCTCTCTTCTGTCCTCTCTACTTTG
TTTCAGTTCAGAAAGTCTTGTCCCTATCTTCCTTTCCCCCTTCGAAACCC
CTTGTGCACGCCCTGTGGCACATGACGCACTTACCTCCCTCCCTCCCTCC
CTCCTTCCCGTCCTCAAGCCCTCATCAATGCCATGCAGTACTCACGAGGG
TATCGGAAAGACTACAGGGACTGGAATGAATGGTGGCGGATAGAGGACAT
TGAAGAGAGCTACGAGTACGTGGAGCAGAAGCTGAGGGCGGCCGGAGCTC
TCACAGAGGGAAGTTCCAGCCTTGTCCGCGAGGCCTTCGAACAGGCTGCG
GCACAGATAGGGCTGACAGTCTTGCCCCCTGCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCCCTCCCTCCCCCTCCCCCTACTACC
TCACCCCAGACGCCTACGCGCCCATGTGCTACCTCGCTCGGATTGACAAA
CATCAAAATAAGAGGTTCACTCGAGTGTCGCCCTTCGAGGCCCTCCTGCA
ACCCCTCCTTGATGCGAAGAGGGCCCCTAATCTTTCTTTTCTCTTCCAGG
CTCAGGCCACTCGCGTCTTGTTCACCCACGGGGGGAAAGGCCGGCGGCTG
CCACGGGCGGCGGGCATCGAGTACATGGATTCGGCCACGGGCCAGACAAG
TGTGCTGCTGCTGGACGAGGCGGACGACGAGGCGGAGGTCATTCTGTGTT
GCGGCGCCATCGACACTCCTAGACTTCTCCTCCTTTCCGGCATCGGCGAC
CCCGAGCACCTCACGGCCCTCGGCATCCCCGTGGTGGCTTCTCTCCCCAG
CGTGGGCCAGGGACTGCAAGACCATCTCCTCGCCCCCCGGGCCTGCTTCA
GTCGCCCTCCCGCGGGTCAGAGGCAGCAGCTGGCCCCCAACTCGATGTAC
GGATGGGTGAATGTCATTCGTAAGGGAAGCCTGGAGGAAAAGGAGGAGAT
CAGGATTTCCCTCATGACCAGCGACATGTCAGTCACACCCGACCTTCTAC
CGCAGATTGCCGTCCCCCTGTATCCCGGCCTATGGTACGGCCTCCTCCGC
GCTTGCCTCACCGCCTGCCTTTCCCTCCTCTGCCTGCTCCCCTTCGTCCG
CTGGCTCACCCGCCAATTTCTAGGCTGCATGATTTGCATCATGAATCCTC
TTAGTCAGGGATGTGTGCGTCTCGCCTCCGCCGACCCGGCTGTCCCTCCG
CTTGTCGACCCCGCCTACCTCTCCCATCCCCAAGACGTCGAGGCGCTCCA
TCAGGGCCTCAAGCTGGCGGGTGATCTCCTTCAGACAGAGCCTCTCGCCC
CCTTCCTCGGCCAAGAGATGCTTCCTGGTCGTCTTTTCAACCACAACACC
TCCCTCACCGACGCTCTAAATTATGGGAAGATCTTCGCGGGCTCCTACTA
CCACCCCGCGTGCTCCTGTCGCTTGGGAAAGGTAGTAAACAAGGATCTGC
GCGTCTTTCACGTGTCGGGCTTGAGGGTGGCGGACGCCTCCATCCTTCCA
CGATTGGGCAGTGCGGGGCCTCTCGCGGCCTGCATGATGATCGGGGATAG
GGCCGGGCGAATCATCTTGGGGTCGAGGGGAAGAGGGGAAGAAGTGAAGG
AGGGGAGGGATGCAAGGAAGGGGAGGGACGAAGGAGACGACGAGAGGGAG
GGCGGGAAGGAGGGAGGGGACGTGCAGCGGGGTTTAAGTCATGGCAAGAA
GAAGCGCGAGTGTCGACAGGGTAAGAGTGCGGCGTTCCTTGCTTCTGTCA
AGCAGAATACACACTCCTCCTCCTCCTCATCCTCTCCCTCTTCCTCACCT
CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCCTCTTCTTGCGAGGGTGAGAGGAAGGAGGGTGGGAGGGAGGGAG
GGAGTGATGTGGAAGAGGAGGACTGGGAGGAGGATGGGCAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGA
AGGGGAGGAGGAGATCCTCAGTTCCCGAAAGCAGCAGTGCGTAGTATGGG
TGACCAAAAGGCAATTTGCCCTGTGATTACGTGCATGAAAGGCTGGTCTG
GATCTCTAGCATTGTTTTTGGGGTGGAAGAAATGGCAAGGGTGGACACTG
GCGCACGATTTCTTGTGCGGTTACTCAAGACCGTTGAGGAACATACCAAC
CCTTGCTTTACTTTTCTTTGAATATTTCTTAATGTACATGTTCTTGTTGC
GATCGCACAAATTTTGGAAGCAATTTGATACATTTCTTGCTCGACGTCCC
ACACTGGATAAAAGCCCCCGAGAAAGGTTTGACCCTTGTTTCTCTCCCGC
TTGGGCCTTGAGAAGGCGATCCAGACGAGTCATCGCGTGCATTGAAAGGA
GGGGAGGACCAAACAGTGGGTGGAGCGAGATGAATAGAACATGGACAGCT
CTGAAGTGCCGAGGGATGGCTGTAAAGAACAAGAAAACATTCAAACAAAT
G

protein sequence of NO29G00120.1

>NO29G00120.1-protein ID=NO29G00120.1-protein|Name=NO29G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MQYSRGYRKDYRDWNEWWRIEDIEESYEYVEQKLRAAGALTEGSSSLVRE
AFEQAAAQIGLTVLPPASSSSSSSSSSSSSSPPSPSPYYLTPDAYAPMCY
LARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQATRVLFTHG
GKGRRLPRAAGIEYMDSATGQTSVLLLDEADDEAEVILCCGAIDTPRLLL
LSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAPRACFSRPPAGQRQQL
APNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQIAVPLYPGL
WYGLLRACLTACLSLLCLLPFVRWLTRQFLGCMICIMNPLSQGCVRLASA
DPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEPLAPFLGQEMLPGR
LFNHNTSLTDALNYGKIFAGSYYHPACSCRLGKVVNKDLRVFHVSGLRVA
DASILPRLGSAGPLAACMMIGDRAGRIILGSRGRGEEVKEGRDARKGRDE
GDDEREGGKEGGDVQRGLSHGKKKRECRQGKSAAFLASVKQNTHSSSSSS
SPSSSPPSSSSSSSSSSSSSSSSSSSSCEGERKEGGREGGSDVEEEDWEE
DGQEEEEEEEEEEEVEEEEEEEEGEEEILSSRKQQCVVWVTKRQFAL*

mRNA from alignment at chr29:44357..51390-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO29G00120.1 ID=NO29G00120.1|Name=NO29G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=7034bp|location=Sequence derived from alignment at chr29:44357..51390- (Nannochloropsis oceanica)
AGGCGATAGCATGTCTCTGTGCCTATTTGGTGGGCAGTGTACGTTAGAGA
GCGGCGCCGGGTATTGACATTCCGGGCACCCAGCAAGACCCGGGTAAAAA
CCCGGATAAAACCCACACAGGTAATGATTTTCAACTGGATACCCTGGCAC
CCGGAATAACGATGGCGTAAAAACGAGAGGAACGGAAAGGGCAGGGGAAA
AGGAAAAGACAGAAGGGAAGAGAAAAGTCATGAAGCCCTTGATTTACGCG
TTACCAAGTGATTCGGCGCGACCCCATGAGCGGAGGCCCTTGTACCCAAT
TTCCCCATACATACCCCCCCTCCCTCACAGACACCCTTCACGGGGTTTGT
CCGGACAGACTTTCGGAGAAGCCGGGTCTGCCCGGGTAGGAAAAGTGCTG
CTGCCGGGTGCGGCTGTACGTAGGTCAATGCTAAGCAACGTGAGCTAAGG
ACGATTTGAATTCAGCGAGGCTGACCGGCGGCGGCTGTTTCGCGTCCCTT
ATGCGCGTCATGGGGCGCTTTCCCACACCCACACCCACACAATGCACACG
TATACAGGCGCGCAGGGGGCAAATCAACAGCCTAGCGCATTCAGCCTCAG
TCCTCATTCTCCATTTCTGCAGCACCCAAGTCGCGTAAACCAAGATCGCA
AGCCAAGCCTAGCCGAGAATCCCATCGCTCGCATCATGATGGTCGAACCT
CCTGCCTCCTCTTTCCCCTCTGCCGCAGCTTCCAAACCCAAGTATATAAT
CGTCGGCGCAGGGCCTGCAGGCTGTGCCTTGGCAGCCGCCCTCGTGAAAG
GTCAGAAAGGGATGGTGGTAATGCTGGAGCGTGGCAAGGAAGAGGTACGC
AGAAAGGAAGGAAGAAACATGGAGATGGAGATGGAGAGAGAGAGGGAGGG
TAGGGCAAAGCGGCTGGTAAGCAGGGGCGTGATGGAGGTGGCTTAGAGCG
TGCGAGGAGGAGCGTGGTTGGTAGCGCTAGTGACATAAATCGTCTTGGGG
AAGGATCTCAACCCATTTTCACACATCCTCCCCTTCCCTTCTCACCCTCC
CTCCCTCCCTCCCCCACTTCCCTATCTCCCCAGCTGCAAGGCCGGTTCGT
CCACAAGGTCAACGACTGGGTTAAGGCTTCCCTCCGCTCCTGGCATGCTG
TGCACTATCTCACTGTCCCTCACGCCCACCTGAACAACCGGCAATTTGTT
ACCCCACGCGGACAAGGCAAAGGGGGCACCGGTGAGTTTGGATGCTCCAA
GCCCTCCCCTCCCGGTCAAGAGGGGGGAGGAAAGTACCTCCTTTCTTCAT
CCATTCTTCTCTACTCTCTCTTCTGTCCTCTCTACTTTGTTTCAGTTCAG
AAAGTCTTGTCCCTATCTTCCTTTCCCCCTTCGAAACCCCTTGTGCACGC
CCTGTGGCACATGACGCACTTACCTCCCTCCCTCCCTCCCTCCTTCCCGT
CCTCAAGCCCTCATCAATGCCATGCAGTACTCACGAGGGTATCGGAAAGA
CTACAGGGACTGGAATGAATGGTGGCGGATAGAGGACATTGAAGAGTAAG
GGAGGGAGGGAGGGAGGAATGGTGGGGGATAGAGGACAGATGAGTAAGAA
GGGAGGGAGGGAGGGAGAGAGCGAGTGAAGGGAGAAAGTGAAGACAGAAG
CTTGTGGCTCTACTGTGCGATTTGTGCTCATCTTCCTCCCCTCCCCTTTA
CTCACTCTCTCCCTTTTTGATTTTTTTCTGTCAAGGAGCTACGAGTACGT
GGAGCAGAAGCTGAGGGCGGCCGGAGCTCTCACAGAGGGAAGTTCCAGCC
TTGTCCGCGAGGCCTTCGAACAGGTCAGGAGAGAGAGAGGGAGGGAGGAA
GGCCGGTCCTCCACCATTCACATTCTGACAATATAATCCCTTTCTTACAC
GGCCAGGCTGCGGCACAGATAGGGCTGACAGTCTTGCCCCCTGCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTCCCTCCCCCT
CCCCCTACTACCTCACCCCAGACGCCTACGCGCCCATGTGCTACCTCGCT
CGGATTGACAAACATCAAAATAAGAGGTTCACTCGAGTGTCGCCCTTCGA
GGTGGGTTGGGGCAGTAGGAGACTCCCCTCCCTTCCTCCGTCCTTCCCTC
CCTCTCTCCTTCCCTTCATTTGATGCCCGTGTGCTTTCTAGCGCTGCACT
CATGCCCTCCCTCCCTCCCTCCCTTCCTCCTTCCTCCCCTCCCTAGGCCC
TCCTGCAACCCCTCCTTGATGCGAAGAGGGCCCCTAATCTTTCTTTTCTC
TTCCAGGCTCAGGCCACTCGCGTCTTGTTCACCCACGGGGGGAAAGGCCG
GCGGCTGCCACGGGCGGTGAGGAGGAGGGAGGAAAAGGAGGGTGTTCTGG
CATGCATGATGTCATGAGAAAAGGGGGGGTAGGGAGGAGGGAGAGGAGAG
GGAGGAGAGGGAGGAGGGAGAGAAGGGAGAGGAAAGGGAGGAGAGGGAGG
AGAGGGAGGAGAGGGAGGAGAGGGAGGAGGGAGAGGAGAGGGAGGAGAGG
AGAGGGAGGAGAGGGAGGAGAGGGAGGAGGGGGCCGGGGGCTGACGCTAA
CTCCTTTCCATACGCCTGCATGATTATAGGCGGGCATCGAGTACATGGAT
TCGGCCACGGGCCAGACAAGTGTGCTGCTGCTGGACGAGGCGGACGACGA
GGCGGAGGTTGGTGGCCTTGTGGGAAGGAGGGAGGGGGGGAGGGGGGGAT
GGAGGAAGGGGAGCAAGGCCGAAGTGTCTCAGCGAGCACGGGCGGACAGA
AAGAGGCCTTCTCATCTCCCTTCCCTCCCTCCCTCCCTCCCGCCCTCCCG
CCCTCCCTCCCTGCTCCAGGTCATTCTGTGTTGCGGCGCCATCGACACTC
CTAGACTTCTCCTCCTTTCCGGCATCGGCGACCCCGAGCACCTCACGTAC
GTCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTCCTCCCTCCCTTCCTCC
CTCCTTGCTTTATACGCCCTCTGCTGTCCTTCTTCCTCTTCCCTCGTTCA
TCCGCACTCTACCTCCCTTCCTTCCCTCCCTCCCTCCCTCCCCACATCTT
CTATTCCCTATTTTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCAGGGCCCTCGGCATCCCCGTGGTGGCTTCTCTCCCCAG
CGTGGGCCAGGGACTGCAAGACCATCTCCTCGCCCCCCGGGCCTGCTTCA
GTCGGTACGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCATCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTTTCCTTCCTCTTTCCCTTCTTTCTCCT
CTCCTTCCCATAGCCACTCCGAGGCAAAGCAATGCGGCTAATCTTGATTT
ATACTCTCTCCCTCCTTCTCTCCCTTCCTTCTTCCTTCCCTCCCTCCCTC
CAGCCCTCCCGCGGGTCAGAGGCAGCAGCTGGCCCCCAACTCGATGTACG
GATGGGTGAATGTCATTCGTAAGGGAAGCCTGGAGGAAAAGGAGGAGATC
AGGTAGGAAGGGAGGGAGGGAGAAAGAGAGAGAGGGAGGGAGGGAGGGAG
GGAGGGAGAGTATGGATAAGAAACGAAAATGAGGGCTTGGCCTTTGAACT
ATTGCCACACAGCCCTCCCTCCCTCCCTCACTCCCTCCCTTCCTCCCTCT
GTATCTTCTCACCGACCCGCTCTTCCTCTTTCCCTCCCTCCCTCTCCTTC
CGTTGGCATGTAGGACCTAACGCCCCTCTCTTCCTCCCTCCCTCTCTTCC
TCCCTCCCAGGATTTCCCTCATGACCAGCGACATGTCAGTCACACCCGAC
CTTCTACCGCAGATTGCCGTCCCCCTGTAAGAAGGGAGGGAGGGAGGGAG
GGAGGGACAGAGAGAGGGAGAGCAGCGACTCTATGTCTTTTTGTCCTTTT
GTTTTCCCTTCTTTCCCTCCCTCTGTCCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCACACCCACAGGTATCCCGGCCTATGGTA
CGGCCTCCTCCGCGCTTGCCTCACCGCCTGCCTTTCCCTCCTCTGCCTGC
TCCCCTTCGTCCGGTAAGGGTCAATCCCCTCCCTCCTTTCCTCCTTCCCT
CCTTCCCCTCTCCCCCGCTACCTCCCATCCGTCCGTCCCTCCCTCCCTCC
CTCCCTGCAGCTGGCTCACCCGCCAATTTCTAGGCTGCATGATTTGCATC
ATGAATCCTCTTAGTCAGGGATGTGTGCGTCTCGCCTCCGCCGACCCGGC
TGTCCCTCCGCTTGTCGGTAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAAGAGAAGGACTGCGTGGTTTTGGGCGTCTTCCTTCCTTTTCCTCTTCC
TCTTGCATTGTGTAGGATAGTGTCTCTTCTGTATACCTGCCTAGGATAAC
TCTATTCTGTATCACCTTCCTCCCTCCTCCCCTCCCTCCCTTTCTCCCTT
CCTCAACCCCCTTCCTCTCCCTTCGCCGGCGTGCATACCTCATGCCAAAA
TCCCTCACACCTCCTCTGCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCC
CTGCCTCCCTTCCTCCCTTTCTAGACCCCGCCTACCTCTCCCATCCCCAA
GACGTCGAGGCGCTCCATCAGGGCCTCAAGCTGGCGGGTGATCTCCTTCA
GACAGAGGTGCGTATTTCTTCAAGGGAGGGAGGAAGGGAGGGAGATGATG
AGTATATCCTCCCGCCTCGTCTCTTTTTGTCCTGCTCTCAACGGCCCAAC
GGCTGCCCCGACCGTTTCCCTACTCTCCCCTTCCTCTCCCAGCCTCTCGC
CCCCTTCCTCGGCCAAGAGATGCTTCCTGGTCGTCTTTTCAACCACAACA
CCTCCCTCACCGACGCTCTAAATTATGGGAAGATCTTCGCGGGCTCCTAC
TACCACCCCGCGTGCTCCTGTCGCTTGGGAAAGGTAAATCCCTCCCCTTT
ATCCCCTCCTCCTCACCCTCGGTATGGTGTCATTCCTCCAACCACCTTCT
CCTTTATTTCGCCTGCCTTCCCTTCCTCACTCCTTTCCTCTCCCCCTCCC
CCCCTCCTTCCTCAGGTAGTAAACAAGGATCTGCGCGTCTTTCACGTGTC
GGGCTTGAGGGTGGCGGACGCCTCCATCCTTCCACGATTGGGCAGTGCGG
GGCCTCTCGGTGAGTGAGAGGAGGGGGGAGGAAGAAGGGAGAAGAGAGAG
GGGAGACGAGGCGGAGCAAGAGAGCGTATGGAGACCTACCTGCCTTGGGA
CGCGCATGATGATCATTCTTATGGCCTTTCCTCCTTTCCCCCCCTCCTCC
ATTGCCAGCGGCCTGCATGATGATCGGGGATAGGGCCGGGCGAATCATCT
TGGGGTCGAGGGGAAGAGGGGAAGAAGTGAAGGAGGGGAGGGATGCAAGG
AAGGGGAGGGACGAAGGAGACGACGAGAGGGAGGGCGGGAAGGAGGGAGG
GGACGTGCAGCGGGGTTTAAGTCATGGCAAGAAGAAGCGCGAGTAGACCA
TAAATGAAACTTCCAGTAAAGAGGATGAAGGGACAGCGTCATGACAGTGC
TCGGTGGGCTACTTTGATTACAATACTTCATTTTTACACCCCTCTTTGAA
TAATATGTTTGTTCGATTACGTCGCTTCAGTTCTCAATATTACGTAATAT
TAGTTATGTATGTATTTATTCGAGTACATAACTTCATTTTTTCATATTTA
TTAGATTATGTTGCTCCATTTTTCAATAGTATGTGTCATTACTTCACAAT
TCCGACGCTGGCTTTCTCTCGCTTTCGCTAGGAAGGACGCAGTCCCCTCC
TCCTCCTTTACCTCCTCCCCCTCCCCCTCCCCCTCTACATGTTTTACCTG
CACACGATTTTATTCATACGGCCCTTTCTCCCTCCTGCCGCTGACTCTGC
AGTTCCCCCTCCTCTTCCACTCCCTCTTCCTCCTCATCACCCTCGCCAAC
CCTGTTGACCACCGCATCCCCCTCCTCTCCCTCCCCCCCGCCCTCCTTCC
CTTCCACCCACAGCACTAGATAGTACTCTCGGAAGGGCGTGCGACACAGG
GTATCGGCGCACGAAATGAAGGCAGATATGACACACAAACAGGTGTCGAC
AGGGTAAGAGTGCGGCGTTCCTTGCTTCTGTCAAGCAGAATACACACTCC
TCCTCCTCCTCATCCTCTCCCTCTTCCTCACCTCCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTGCG
AGGGTGAGAGGAAGGAGGGTGGGAGGGAGGGAGGGAGTGATGTGGAAGAG
GAGGACTGGGAGGAGGATGGGCAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAAGGGGAGGAGGAGATCC
TCAGTTCCCGAAAGCAGCAGTGCGTAGTATGGGTGACCAAAAGGCAATTT
GCCCTGTGATTACGTGCATGAAAGGCTGGTCTGGATCTCTAGCATTGTTT
TTGGGGTGGAAGAAATGGCAAGGGTGGACACTGGCGCACGATTTCTTGTG
CGGTTACTCAAGACCGTTGAGGAACATACCAACCCTTGCTTTACTTTTCT
TTGAATATTTCTTAATGTACATGTTCTTGTTGCGATCGCACAAATTTTGG
AAGCAATTTGATACATTTCTTGCTCGACGTCCCACACTGGATAAAAGCCC
CCGAGAAAGGTTTGACCCTTGTTTCTCTCCCGCTTGGGCCTTGAGAAGGC
GATCCAGACGAGTCATCGCGTGCATTGAAAGGAGGGGAGGACCAAACAGT
GGGTGGAGCGAGATGAATAGAACATGGACAGCTCTGAAGTGCCGAGGGAT
GGCTGTAAAGAACAAGAAAACATTCAAACAAATG

Coding sequence (CDS) from alignment at chr29:44357..51390-

>NO29G00120.1 ID=NO29G00120.1|Name=NO29G00120.1|organism=Nannochloropsis oceanica|type=CDS|length=1944bp|location=Sequence derived from alignment at chr29:44357..51390- (Nannochloropsis oceanica)
ATGCAGTACTCACGAGGGTATCGGAAAGACTACAGGGACTGGAATGAATG
GTGGCGGATAGAGGACATTGAAGAGAGCTACGAGTACGTGGAGCAGAAGC
TGAGGGCGGCCGGAGCTCTCACAGAGGGAAGTTCCAGCCTTGTCCGCGAG
GCCTTCGAACAGGCTGCGGCACAGATAGGGCTGACAGTCTTGCCCCCTGC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTCCCT
CCCCCTCCCCCTACTACCTCACCCCAGACGCCTACGCGCCCATGTGCTAC
CTCGCTCGGATTGACAAACATCAAAATAAGAGGTTCACTCGAGTGTCGCC
CTTCGAGGCCCTCCTGCAACCCCTCCTTGATGCGAAGAGGGCCCCTAATC
TTTCTTTTCTCTTCCAGGCTCAGGCCACTCGCGTCTTGTTCACCCACGGG
GGGAAAGGCCGGCGGCTGCCACGGGCGGCGGGCATCGAGTACATGGATTC
GGCCACGGGCCAGACAAGTGTGCTGCTGCTGGACGAGGCGGACGACGAGG
CGGAGGTCATTCTGTGTTGCGGCGCCATCGACACTCCTAGACTTCTCCTC
CTTTCCGGCATCGGCGACCCCGAGCACCTCACGGCCCTCGGCATCCCCGT
GGTGGCTTCTCTCCCCAGCGTGGGCCAGGGACTGCAAGACCATCTCCTCG
CCCCCCGGGCCTGCTTCAGTCGCCCTCCCGCGGGTCAGAGGCAGCAGCTG
GCCCCCAACTCGATGTACGGATGGGTGAATGTCATTCGTAAGGGAAGCCT
GGAGGAAAAGGAGGAGATCAGGATTTCCCTCATGACCAGCGACATGTCAG
TCACACCCGACCTTCTACCGCAGATTGCCGTCCCCCTGTATCCCGGCCTA
TGGTACGGCCTCCTCCGCGCTTGCCTCACCGCCTGCCTTTCCCTCCTCTG
CCTGCTCCCCTTCGTCCGCTGGCTCACCCGCCAATTTCTAGGCTGCATGA
TTTGCATCATGAATCCTCTTAGTCAGGGATGTGTGCGTCTCGCCTCCGCC
GACCCGGCTGTCCCTCCGCTTGTCGACCCCGCCTACCTCTCCCATCCCCA
AGACGTCGAGGCGCTCCATCAGGGCCTCAAGCTGGCGGGTGATCTCCTTC
AGACAGAGCCTCTCGCCCCCTTCCTCGGCCAAGAGATGCTTCCTGGTCGT
CTTTTCAACCACAACACCTCCCTCACCGACGCTCTAAATTATGGGAAGAT
CTTCGCGGGCTCCTACTACCACCCCGCGTGCTCCTGTCGCTTGGGAAAGG
TAGTAAACAAGGATCTGCGCGTCTTTCACGTGTCGGGCTTGAGGGTGGCG
GACGCCTCCATCCTTCCACGATTGGGCAGTGCGGGGCCTCTCGCGGCCTG
CATGATGATCGGGGATAGGGCCGGGCGAATCATCTTGGGGTCGAGGGGAA
GAGGGGAAGAAGTGAAGGAGGGGAGGGATGCAAGGAAGGGGAGGGACGAA
GGAGACGACGAGAGGGAGGGCGGGAAGGAGGGAGGGGACGTGCAGCGGGG
TTTAAGTCATGGCAAGAAGAAGCGCGAGTGTCGACAGGGTAAGAGTGCGG
CGTTCCTTGCTTCTGTCAAGCAGAATACACACTCCTCCTCCTCCTCATCC
TCTCCCTCTTCCTCACCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTGCGAGGGTGAGAGGAAGG
AGGGTGGGAGGGAGGGAGGGAGTGATGTGGAAGAGGAGGACTGGGAGGAG
GATGGGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGA
GGAGGAGGAGGAGGAGGAAGGGGAGGAGGAGATCCTCAGTTCCCGAAAGC
AGCAGTGCGTAGTATGGGTGACCAAAAGGCAATTTGCCCTGTGA

Synonyms

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