jgi.p|Nanoce1779_2|353741, gene_10453 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|353741
Unique Namegene_10453
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_57:51741..56686 +

Link to JBrowse

Properties
Property NameValue
TranscriptId353827
ProteinId353741
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:51741..56686 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008812choline dehydrogenase activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006066alcohol metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL079ncniL079Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G00120NO29G00120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|353741mRNA_10453-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|353741mRNA_10453Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|353741

>mRNA_10453-protein ID=mRNA_10453-protein|Name=jgi.p|Nanoce1779_2|353741|organism=Nannochloropsis oceanica|type=polypeptide|length=587bp
MMVEPPASSFPSAAASKPKYIIVGAGPAGCALAAALVKGQKGMVVMLERG
KEELQGRFVHKVNDWVKASLRSWHAVHYLTVPHAHLNNRQFVTPRGQGKG
GTALINAMQYSRGYRKDYRDWNEWWRIEDIEESYEYVEQKLRAAGALTEG
SSSLVREAFEQAAAQIGLTVLPPASSSSSSSSSSSSSSPPSPSPYYLTPD
AYAPMCYLARIDKHQNKRFTRVSPFEALLQPLLDAKRAPNLSFLFQAQAT
RVLFTHGGKGRRLPRAAASSKWHSAPGPDKCAAAGNEGTTRRRVILCCGA
IDTPRLLLLSGIGDPEHLTALGIPVVASLPSVGQGLQDHLLAPRACFSRP
PAGQRQQLAPNSMYGWVNVIRKGSLEEKEEIRISLMTSDMSVTPDLLPQI
AVPLYPGLWYGLLRACLTACLSLLCLLPFVRWLTRQFLGCMICIMNPLSQ
GCVRLASADPAVPPLVDPAYLSHPQDVEALHQGLKLAGDLLQTEVRISSR
EGGREGDDEYILPPRLFLSCSQRPNGCPDRFPTLPFLSQPLAPFLGQEML
PGRLFNHNTSLTDALNYGKIFAGSYYHPACSCRLGK*
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Synonyms
Publications