NO28G01290, NO28G01290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01290 vs. NCBI_GenBank
Match: EWM20854.1 (peroxiredoxin 1 [Nannochloropsis gaditana]) HSP 1 Score: 350.1 bits (897), Expect = 5.700e-93 Identity = 188/257 (73.15%), Postives = 200/257 (77.82%), Query Frame = 0 Query: 1 MSKSFFSNFSLCTLVLHAIVVFLLLSVGIAPVAHAQNHPAQNTMATNKPVPMIGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFP--LISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYFQAVADELDGGAAKKT 256 M K F F CTL L LS PV AQ+ TMATNKPVPMIGKPAPD A+AVMPDGSFKEL+L QY+G+Y+ILVMYPLDFTFVCPSELIAFSDRI EF +L A+VVGLSVDSKYSHLAWSKSPRKAGGLGG FP SD + L EGVALRGLFIIDP GILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPG RTMKADP+ESL YFQAVA EL+GGA KK+ Sbjct: 46 MIKDIFFPF-FCTLALS------FLSYPSIPVTLAQS--VSGTMATNKPVPMIGKPAPDITAEAVMPDGSFKELSLKQYRGRYVILVMYPLDFTFVCPSELIAFSDRIQEFHDLNADVVGLSVDSKYSHLAWSKSPRKAGGLGGFEFPPHFGSD-------ERDCLRLREGVALRGLFIIDPHGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGMRTMKADPVESLAYFQAVAAELEGGAVKKS 286
BLAST of NO28G01290 vs. NCBI_GenBank
Match: BAA32086.1 (natural killer cell enhancing factor [Cyprinus carpio] >BAB39202.1 natural killer enhancing factor [Cyprinus carpio]) HSP 1 Score: 282.7 bits (722), Expect = 1.100e-72 Identity = 127/188 (67.55%), Postives = 154/188 (81.91%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAPDF A AVMPDG FK+L+LS+YKGKY++L YPLDFTFVCP+E+IAFSD + EF+++ EV+G SVDS + HLAW +PRK GGLG +N PL++D + ++ DYGVL +EG+A RGLFIID KGILRQITINDLP+GR +DETLRLVQA F DKHGEVCPAGWKPGK T+K D +S +YF Sbjct: 8 IGKPAPDFTAKAVMPDGQFKDLSLSEYKGKYVVLFFYPLDFTFVCPTEIIAFSDAVEEFRKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMNVPLVADSLRSISQDYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVQQSKDYF 195
BLAST of NO28G01290 vs. NCBI_GenBank
Match: KTG41714.1 (hypothetical protein cypCar_00024396 [Cyprinus carpio]) HSP 1 Score: 282.7 bits (722), Expect = 1.100e-72 Identity = 127/188 (67.55%), Postives = 154/188 (81.91%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAPDF A AVMPDG FK+L+LS+YKGKY++L YPLDFTFVCP+E+IAFSD + EF+++ EV+G SVDS + HLAW +PRK GGLG +N PL++D + ++ DYGVL +EG+A RGLFIID KGILRQITINDLP+GR +DETLRLVQA F DKHGEVCPAGWKPGK T+K D +S +YF Sbjct: 22 IGKPAPDFTAKAVMPDGQFKDLSLSEYKGKYVVLFFYPLDFTFVCPTEIIAFSDAVEEFRKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMNVPLVADSLRSISQDYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVQQSKDYF 209
BLAST of NO28G01290 vs. NCBI_GenBank
Match: XP_005303071.1 (peroxiredoxin-1 [Chrysemys picta bellii]) HSP 1 Score: 281.6 bits (719), Expect = 2.500e-72 Identity = 127/188 (67.55%), Postives = 152/188 (80.85%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAPDFKA AVMPDG FK+++LS YKGKY++ YPLDFTFVCP+E+IAFSDR EF++L +V+G SVDS + HLAW +P+K GGLG ++ PL+SD + +A DYGVL +EG+A RGLFIID KGILRQITINDLP+GR VDETLRLVQA F DKHGEVCPAGWKPG T+K D +S E+F Sbjct: 8 IGKPAPDFKATAVMPDGQFKDISLSDYKGKYIVFFFYPLDFTFVCPTEIIAFSDRADEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGNMSIPLVSDTKRTIAKDYGVLKDDEGIAYRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSETIKPDVQKSKEFF 195
BLAST of NO28G01290 vs. NCBI_GenBank
Match: XP_016100540.1 (PREDICTED: peroxiredoxin-1-like [Sinocyclocheilus grahami] >XP_016100541.1 PREDICTED: peroxiredoxin-1-like [Sinocyclocheilus grahami] >XP_016320200.1 PREDICTED: peroxiredoxin-1-like [Sinocyclocheilus anshuiensis] >XP_016320201.1 PREDICTED: peroxiredoxin-1-like [Sinocyclocheilus anshuiensis] >XP_016385789.1 PREDICTED: peroxiredoxin-1 [Sinocyclocheilus rhinocerous] >XP_016385793.1 PREDICTED: peroxiredoxin-1 [Sinocyclocheilus rhinocerous] >XP_016385797.1 PREDICTED: peroxiredoxin-1 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 281.6 bits (719), Expect = 2.500e-72 Identity = 127/188 (67.55%), Postives = 153/188 (81.38%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAPDF A AVMPDG FK+L+LS YKGKY++L YPLDFTFVCP+E+IAFSD + EF+++ EV+G SVDS + HLAW +PRK GGLG +N PL++D + ++ DYGVL +EG+A RGLFIID KGILRQITINDLP+GR +DETLRLVQA F DKHGEVCPAGWKPGK T+K D +S +YF Sbjct: 8 IGKPAPDFTAKAVMPDGQFKDLSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDAVEEFRKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMNVPLVADSLRSISQDYGVLKEDEGIAYRGLFIIDVKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVQQSKDYF 195
BLAST of NO28G01290 vs. NCBI_GenBank
Match: XP_007061719.1 (PREDICTED: peroxiredoxin-1 [Chelonia mydas]) HSP 1 Score: 280.8 bits (717), Expect = 4.300e-72 Identity = 127/188 (67.55%), Postives = 151/188 (80.32%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAP FKA AVMPDG FK++TLS YKGKY++ YPLDFTFVCP+E+IAFSDR EF++L +V+G SVDS + HLAW +P+K GGLG +N PL+SD + +A +YGVL +EG+A RGLFIID KGILRQITINDLP+GR VDETLRLVQA F DKHGEVCPAGWKPG T+K D +S E+F Sbjct: 8 IGKPAPSFKATAVMPDGQFKDITLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRADEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGNMNIPLVSDTKRTIAKEYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSETIKPDVQKSKEFF 195
BLAST of NO28G01290 vs. NCBI_GenBank
Match: XP_020379938.1 (peroxiredoxin-1-like [Rhincodon typus]) HSP 1 Score: 280.0 bits (715), Expect = 7.300e-72 Identity = 124/189 (65.61%), Postives = 158/189 (83.60%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYFQ 242 IG PAPDF A AVMP G F++LTLS+YKGKY++L YPLDFTFVCP+E+IAFSDR +EF+++ EV+G S DS +SHLAW+K+PRK GG+G ++ PL++D+T+ +A DYG+L +EG+A RGLFIID KGILRQITINDLP+GR VDETLRLVQA F DKHGEVCPAGWKPG+ T+K + +S ++F+ Sbjct: 8 IGHPAPDFTAKAVMPSGEFEDLTLSKYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAAEFRKINCEVIGASTDSHFSHLAWTKTPRKQGGIGHMDIPLVADLTQSIAKDYGILKEDEGIAYRGLFIIDEKGILRQITINDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGQDTIKPNVNDSKKFFE 196
BLAST of NO28G01290 vs. NCBI_GenBank
Match: XP_006729071.1 (PREDICTED: peroxiredoxin-1 [Leptonychotes weddellii] >XP_021539525.1 peroxiredoxin-1 [Neomonachus schauinslandi]) HSP 1 Score: 279.6 bits (714), Expect = 9.500e-72 Identity = 126/188 (67.02%), Postives = 152/188 (80.85%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IG PAP+FKA AVMPDG FK+L+LS YKGKY++ YPLDFTFVCP+E+IAFSDR+ EF++L +V+G SVDS + HLAW +P+K GGLG +N PL+SD + +A DYGVL +EG++ RGLFIID KGILRQIT+NDLP+GR VDETLRLVQA F DKHGEVCPAGWKPG T+K D +S EYF Sbjct: 8 IGHPAPNFKATAVMPDGQFKDLSLSDYKGKYIVFFFYPLDFTFVCPTEIIAFSDRVEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYF 195
BLAST of NO28G01290 vs. NCBI_GenBank
Match: ALD62537.1 (peroxiredoxin 1 [Mylopharyngodon piceus]) HSP 1 Score: 279.6 bits (714), Expect = 9.500e-72 Identity = 126/188 (67.02%), Postives = 152/188 (80.85%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAPDF A AVMPDG FK+L+LS YKGKY++L YPLDFTFVCP+E+IAFSD + EF+++ EV+G SVDS + HLAW +PRK GGLG + PL++D + ++ DYGVL +EG+A RGLFIID KGILRQITINDLP+GR +DETLRLVQA F DKHGEVCPAGWKPGK T+K D +S +YF Sbjct: 8 IGKPAPDFTAKAVMPDGQFKDLSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDAVEEFRKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMKVPLVADSLRSISQDYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVQQSKDYF 195
BLAST of NO28G01290 vs. NCBI_GenBank
Match: XP_016333542.1 (PREDICTED: peroxiredoxin-1 [Sinocyclocheilus anshuiensis] >XP_016333543.1 PREDICTED: peroxiredoxin-1 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 279.6 bits (714), Expect = 9.500e-72 Identity = 127/188 (67.55%), Postives = 151/188 (80.32%), Query Frame = 0 Query: 53 IGKPAPDFKADAVMPDGSFKELTLSQYKGKYLILVMYPLDFTFVCPSELIAFSDRISEFQELKAEVVGLSVDSKYSHLAWSKSPRKAGGLGGLNFPLISDITKEVACDYGVLIPEEGVALRGLFIIDPKGILRQITINDLPIGRDVDETLRLVQAIDFVDKHGEVCPAGWKPGKRTMKADPIESLEYF 241 IGKPAPDF A AVMPDG FK+L+LS YKGKY++L YPLDFTFVCP+E+IAFSD + EF+++ EV+G SVDS + HLAW +PRK GGLG + PL++D ++ DYGVL +EG+A RGLFIID KGILRQITINDLP+GR +DETLRLVQA F DKHGEVCPAGWKPGK T+K D +S EYF Sbjct: 8 IGKPAPDFTAKAVMPDGQFKDLSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDAVEEFRKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMKVPLVADSLHSISQDYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVQQSKEYF 195 The following BLAST results are available for this feature:
BLAST of NO28G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01290 ID=NO28G01290|Name=NO28G01290|organism=Nannochloropsis oceanica|type=gene|length=4377bpback to top protein sequence of NO28G01290.1 >NO28G01290.1-protein ID=NO28G01290.1-protein|Name=NO28G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top protein sequence of NO28G01290.2 >NO28G01290.2-protein ID=NO28G01290.2-protein|Name=NO28G01290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top protein sequence of NO28G01290.3 >NO28G01290.3-protein ID=NO28G01290.3-protein|Name=NO28G01290.3|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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