NO28G00930, NO28G00930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00930 vs. NCBI_GenBank
Match: EWM20906.1 (Ribosomal protein L7A/L8 [Nannochloropsis gaditana]) HSP 1 Score: 430.3 bits (1105), Expect = 4.300e-117 Identity = 226/255 (88.63%), Postives = 235/255 (92.16%), Query Frame = 0 Query: 1 MAPKKVTKKPAKKAAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 MAPKKV LF AEPRSFR+GGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFS AL+KNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGE AP+KQTV+K+GLKHVTELIEAKKVKFVAIAHDVNPIELVVW+PALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKA+FEKMC +FK +FNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF Sbjct: 1 MAPKKVAXXXXXXXXXXXXXLFAAEPRSFRIGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQTVIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255
BLAST of NO28G00930 vs. NCBI_GenBank
Match: CBN74803.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 299.3 bits (765), Expect = 1.200e-77 Identity = 160/253 (63.24%), Postives = 192/253 (75.89%), Query Frame = 0 Query: 4 KKVTKKPAKKAAPK-ANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 KK KK K K A+PLF A +SFR+G I+PK DLSRFVKWPRY+R+QRQRKIL QRLKVPP+INQFS A++KNQATEL K+L KY+PE K K++RLK++AAAK +G E A V+KFGLKHVT LIE +K V IAHDV PIELVVWLPALCRK GIPY I+KGKARLG LVH+KNAAV+ L KED++ + +F QFN+ R WGGG+MGLKTQ++LE RQ+A+EAELAKKA + Sbjct: 5 KKQVKKQVKSTPKKVADPLFPARKKSFRIGRDIQPK-VDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSKAIDKNQATELLKVLMKYQPEDKKAKQQRLKEIAAAKEAGKEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256
BLAST of NO28G00930 vs. NCBI_GenBank
Match: XP_002906545.1 (60S ribosomal protein L7a-2 [Phytophthora infestans T30-4] >EEY65946.1 60S ribosomal protein L7a-2 [Phytophthora infestans T30-4]) HSP 1 Score: 298.5 bits (763), Expect = 2.000e-77 Identity = 162/244 (66.39%), Postives = 192/244 (78.69%), Query Frame = 0 Query: 14 AAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDKK--ERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 AA K +PLFVA P++FR GG I+PK RDLSRFV+WPRYVR+QRQRK+LYQRLKVPP+INQFSN +EKN AT+LFKLL KY+PE+K K +RL+ +AA K EA+AP VVKFGL HVT LIE KK K V IAHDV+PIELVV+LPALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F+ +FND R WGGGIMGLKTQK+LE+R++ + AE AKKA + Sbjct: 26 AASKKDPLFVATPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKVLYQRLKVPPSINQFSNTVEKNVATDLFKLLLKYQPETKAAKTQRLRNIAAGKE---EASAP--PAVVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLTQVFRTKFNDDSVARRKWGGGIMGLKTQKKLELREKVIAAEAAKKAQY 263
BLAST of NO28G00930 vs. NCBI_GenBank
Match: XP_008909489.1 (hypothetical protein PPTG_14734 [Phytophthora parasitica INRA-310] >ETI40671.1 hypothetical protein F443_14031 [Phytophthora parasitica P1569] >ETK80770.1 hypothetical protein L915_13675 [Phytophthora parasitica] >ETL34185.1 hypothetical protein L916_13574 [Phytophthora parasitica] >ETL87427.1 hypothetical protein L917_13382 [Phytophthora parasitica] >ETM40666.1 hypothetical protein L914_13469 [Phytophthora parasitica] >ETN05019.1 hypothetical protein PPTG_14734 [Phytophthora parasitica INRA-310] >ETO69358.1 hypothetical protein F444_14063 [Phytophthora parasitica P1976] >ETP10428.1 hypothetical protein F441_13959 [Phytophthora parasitica CJ01A1] >ETP38603.1 hypothetical protein F442_13872 [Phytophthora parasitica P10297] >KUF95419.1 Malic enzyme [Phytophthora nicotianae] >KUG02207.1 60S ribosomal protein L7a-2 [Phytophthora nicotianae]) HSP 1 Score: 297.7 bits (761), Expect = 3.400e-77 Identity = 161/244 (65.98%), Postives = 194/244 (79.51%), Query Frame = 0 Query: 14 AAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFND--KKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 AA K +PLFV+ P++FR GG I+PK RDLSRFV+WPRYVR+QRQRK+LYQRLKVPP+INQFSN +EKN AT+LFKLL KY+PE+K K +RL+ +AA K EA+AP VVKFGL HVT LIE KK K V IAHDV+PIELVV+LPALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F+ +FN+ + R WGGGIMGLKTQK+LE+R++A+ AE AKKA + Sbjct: 26 AASKKDPLFVSAPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKVLYQRLKVPPSINQFSNTVEKNVATDLFKLLLKYQPETKAAKTQRLRNIAAGKE---EASAP--PAVVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLTQVFRTKFNEDVQARRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 263
BLAST of NO28G00930 vs. NCBI_GenBank
Match: POM75983.1 (60S ribosomal protein L7a-2 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 295.4 bits (755), Expect = 1.700e-76 Identity = 162/244 (66.39%), Postives = 191/244 (78.28%), Query Frame = 0 Query: 14 AAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDKK--ERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 AA K +PLFV+ P++FR GG I+PK RDLSRFV+WPRYVR+QRQRK+LYQRLKVPP+INQFSN LEKN AT+LFKLL KY+PE+K K RL+ +AA K EA+AP VVKFGL HVT LIE KK K V IAHDV+PIELVV+LPALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F +FN+ R WGGGIMGLKTQK+LE+R++A+ AE AKKA + Sbjct: 25 AASKKDPLFVSAPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKVLYQRLKVPPSINQFSNTLEKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKE---EASAP--PAVVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLTQTFHAKFNEDSTIRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 262
BLAST of NO28G00930 vs. NCBI_GenBank
Match: XP_009034150.1 (hypothetical protein AURANDRAFT_5527, partial [Aureococcus anophagefferens] >EGB11038.1 hypothetical protein AURANDRAFT_5527, partial [Aureococcus anophagefferens]) HSP 1 Score: 292.7 bits (748), Expect = 1.100e-75 Identity = 158/251 (62.95%), Postives = 190/251 (75.70%), Query Frame = 0 Query: 4 KKVTKKPAKKAAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDK--KERTWGGGIMGLKTQKRLEIRQRAVEAELAKK 253 K+V K P KK A K +PLF A PR+FRVGG I+P RDLSRFVKWPRYVR+QRQ+KIL QRLKVPPA+NQF+ L+KNQA ELFKLL KY+PE K K +R+K LA AKA+GG A TVVKFGLKHVT L+E KK K V IA DV+PIELVVWLPALC+K +PY IVK K+RLG +VH+K AAV L +KED+ S +++ +FK +ND R WGGGIMGLKTQ +L R++A++AELAKK Sbjct: 5 KEVKKAPPKKEAAKPDPLFQATPRNFRVGGDIQPT-RDLSRFVKWPRYVRLQRQKKILQQRLKVPPALNQFATTLDKNQAAELFKLLMKYQPEDKAAKADRVKALAEAKAAGGAAPEGKAPTVVKFGLKHVTYLVENKKAKLVCIASDVDPIELVVWLPALCKKMDVPYCIVKNKSRLGTVVHQKTAAVCCLTTVKKEDQHSLDQLRSNFKAMYNDNVAHARKWGGGIMGLKTQAKLAKREKALQAELAKK 254
BLAST of NO28G00930 vs. NCBI_GenBank
Match: OWZ22172.1 (60S ribosomal protein L7a-2 [Phytophthora megakarya]) HSP 1 Score: 291.6 bits (745), Expect = 2.400e-75 Identity = 159/243 (65.43%), Postives = 190/243 (78.19%), Query Frame = 0 Query: 15 APKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDKK--ERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 A K +PLFV+ P++FR GG I+PK RDLSRFV+WPRYVR+QRQRK+LYQRLKVPP+INQFSN ++KN AT+LFKLL KY+PE+K K RL+ +AA K EA+AP VVKFGL HVT LIE KK K V IAHDV+PIELVV+LPALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F +FN+ R WGGGIMGLKTQK+LE+R++A+ AE AKKA + Sbjct: 26 ASKKDPLFVSAPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKVLYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKE---EASAP--PAVVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLTETFHAKFNEDNVARRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 262
BLAST of NO28G00930 vs. NCBI_GenBank
Match: XP_024586658.1 (ribosomal protein rpl7a [Plasmopara halstedii] >CEG50289.1 ribosomal protein rpl7a [Plasmopara halstedii]) HSP 1 Score: 290.4 bits (742), Expect = 5.400e-75 Identity = 158/239 (66.11%), Postives = 186/239 (77.82%), Query Frame = 0 Query: 19 NPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDKK--ERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 NPLF + P++FR G I+PK RDLSRFV+WPRYVR+QRQRKILYQRLKVPP+INQFSN ++KN AT+LFKLL KY+PE+K K RL+ +AA K EA AP VVKFGL HVT LIE KK K V IAHDVNPIELVV+LPALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + F+ +FN+ R WGGGIMGLKTQK+LE+R++A+ AE AKKA + Sbjct: 32 NPLFASTPKNFRKGNDIQPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKQ---EATAP--PAVVKFGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSQVFRAKFNEDSATRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 264
BLAST of NO28G00930 vs. NCBI_GenBank
Match: XP_009515589.1 (hypothetical protein PHYSODRAFT_370958, partial [Phytophthora sojae] >EGZ28314.1 hypothetical protein PHYSODRAFT_370958, partial [Phytophthora sojae]) HSP 1 Score: 290.0 bits (741), Expect = 7.000e-75 Identity = 160/237 (67.51%), Postives = 185/237 (78.06%), Query Frame = 0 Query: 11 AKKAAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDK--KERTWGGGIMGLKTQKRLEIRQRAV 246 A A K NPLFV+ P++FR GG I+PK RDLSRFV+WPRYVR+QRQRKILYQRLKVPP+INQFSN LEKN AT+LFKLL KY+PE+K K RL+ +AA K EA+AP VVKFGL HVT LIE KK K V IAHDV+PIELVV+LPALCR+ IPY IVKGKARLG LVH+KNAAVVAL KEDKA F+ + FK +FND R WGGGIMGLKTQK+LE+R++A+ Sbjct: 2 AASTASKKNPLFVSTPKNFRKGGDIQPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTLEKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKE---EASAP--PAVVKFGLNHVTSLIENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFKAKFNDDAVSRRKWGGGIMGLKTQKKLELREKAI 232
BLAST of NO28G00930 vs. NCBI_GenBank
Match: OQR96157.1 (60S ribosomal protein L7a-2 [Achlya hypogyna]) HSP 1 Score: 285.8 bits (730), Expect = 1.300e-73 Identity = 164/262 (62.60%), Postives = 197/262 (75.19%), Query Frame = 0 Query: 2 APKKVTKKPAKKA---APK---ANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAHDVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKASFEKMCGDFKNQFNDK--KERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 256 A K KPA KA APK A+PLF + P++FR+GG I+PK RDLSRFV+WP+ VR+QRQ KIL RLKVPP+INQFSN L+KN AT+L+KLL KY+PE+K K +RL+ +AA K + +AP ++K+GL HVT LIE KK K V IAHDV PIELVV+LPALCRK IPY IVKGKARLG LVHKKNAAVVAL + KEDKA F+ + F+ QFND+ R WGGGIMGLKTQK+LE+R +AV AELAKKA + Sbjct: 10 ANTKPAAKPAAKAGSTAPKKKTADPLFPSAPKNFRLGGDIQPK-RDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFSNTLDKNTATDLYKLLLKYQPETKAAKTQRLRDIAAGKE---QVSAP--PALIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDETSHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 265 The following BLAST results are available for this feature:
BLAST of NO28G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00930 ID=NO28G00930|Name=NO28G00930|organism=Nannochloropsis oceanica|type=gene|length=2044bpback to top protein sequence of NO28G00930.1 >NO28G00930.1-protein ID=NO28G00930.1-protein|Name=NO28G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=256bpback to top Synonyms
Publications
|