jgi.p|Nanoce1779_2|606841, gene_9197 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|606841
Unique Namegene_9197
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_36:194919..196704 +

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Properties
Property NameValue
TranscriptId606927
ProteinId606841
Product name50S ribosomal protein L30e-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:194919..196704 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL054ncniL054Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00930NO28G00930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606841mRNA_9197-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606841mRNA_9197Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|606841

>mRNA_9197-protein ID=mRNA_9197-protein|Name=jgi.p|Nanoce1779_2|606841|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MAPKKVTKKPAKKAAPKANPLFVAEPRSFRVGGAIRPKGRDLSRFVKWPR
YVRIQRQRKILYQRLKVPPAINQFSNALEKNQATELFKLLAKYRPESKVE
KRERLKQLAAAKASGGEAAAPSKQTVVKFGLKHVTELIEAKKVKFVAIAH
DVNPIELVVWLPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARK
EDKASFEKMCGDFKNQFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELA
KKAAF*
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Synonyms
Publications