NO28G00020, NO28G00020 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00020 vs. NCBI_GenBank
Match: CBN80232.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 325.9 bits (834), Expect = 2.900e-85 Identity = 193/463 (41.68%), Postives = 253/463 (54.64%), Query Frame = 0
Query: 82 HPYSVRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQ----------QHIPLHSLPAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLG-THRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLEEETHLVSGLPDADRPLLYSRFVEVLRRVCP 534
HPY V P+G+ G + D + R GLG T A+ DE ++ F LDA L RL+ SRA Y +AH ++WK+LV+ +A G ++ +G WK T + R H+PL + +SD+L+ P+ ++ +RR D R + EEFR E PN P VL WPA +W R R + GD +H GL F + Y YA+E +D+LPLY+FD RF+DKCP L ++Y +P F D F++LG RPDHRWLI GP SGS+FH DPN T+AWNA + GRKKWI+FPP PPGVHPS+DGLDLA PV++TEW FY + A R +E V GE++FVP GWWH V+N E S+AITQN+VSR NLPHV+ FL + HL+SGLP R L FV + P
Sbjct: 20 HPYGVEPLGNIFL-GRSSDCKPR--GLG--TLASFDDERMLDLLCF-LDAPALGRLACASRALYVFAHV-EELWKTLVVQEMAR------RPGQGVETRGGWKTTLQHIAVGRSXXXXXXXXXXXXXXXXXXXSVPHVPL-KVSGFFSDLLFQPHHCATTV--IRPEWVRRDTVD--RRAGLSPEEFRRLYEEPNRPVVLTDAAASWPALEKWTRSR------LSAAHGD-LRVHAGGLEFALKDYLRYARESKDELPLYVFDKRFVDKCPDLGREY--DVPSVFAD--DLFSVLGEERRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGRKKWIMFPPGETPPGVHPSEDGLDLAAPVSITEWFLNFYEECHAPTR-RVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPHVVKFLLTQKHLISGLPPDQRDDLGESFVTAMSEQRP 452
BLAST of NO28G00020 vs. NCBI_GenBank
Match: XP_015617023.1 (PREDICTED: F-box protein At5g06550 [Oryza sativa Japonica Group] >ABA94397.1 transcription factor jumonji, putative, expressed [Oryza sativa Japonica Group] >BAF28491.1 Os11g0572800 [Oryza sativa Japonica Group] >BAT14541.1 Os11g0572800 [Oryza sativa Japonica Group]) HSP 1 Score: 317.0 bits (811), Expect = 1.300e-82 Identity = 200/504 (39.68%), Postives = 282/504 (55.95%), Query Frame = 0
Query: 52 DKTLSHTDRGAEAGGACTTAGHRERKHGGRHPYSVRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSLP--AVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLE--EETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQARRVRE 552
D T H A AG AG R GG V+P+G+ L G ++R GLG +PD+ L+ L LL A LARLS SRA Y A ++ +W++LVL L G + GSW+ATY+ ++ + H+P L YSD L+ + + +++ L R D R R +VE+F ++ E PN P +LEG +E WPA ++W RE L +V+A G + + +S T+ Y YA Q++ PLY+FD++F +K P + +DY +P YF++ D F +LG RPDHRW+I GP GSGS+FH DPN+T+AWNAV+KG KKW++FPP ++PPGVHPS DG ++ +PV++ EW FY A + W + VE +C GE++FVP GWWHLV+N EES+AITQNYVSR NL +VL FL+ + LVSG DR L+ +F + P + Q + E Q R+
Sbjct: 49 DATAFHLKTSARAGPG--GAGSGRRGDGG---CLVQPLGNLLLLGGGGNLRDA--GLG--ALRPLPDDVLLDV-LGLLAARDLARLSAASRALYVVA-SHDPLWRALVLDEL----------GGDFAFSGSWRATYI-----------AAASGGRAHLPPRGLEIRGFYSDYLFQSW--LCANMEMRPEWLHRDTID--RRRGMSVEQFVSEFEEPNRPVLLEGCLESWPALQKWTREH--LLKVSA---GKEFAV--GPVSMTLDRYLQYADNVQEERPLYLFDAKFTEKVPEMGRDY--EVPAYFRE--DLFGVLGEERPDHRWVIIGPAGSGSSFHVDPNSTSAWNAVIKGAKKWVMFPPEVVPPGVHPSADGAEVTSPVSIMEWFMNFYG---ACKTWEKRPVECICRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNASELVSG--TTDRVNLHDKFRNAIDMTYPGMIKQLELEAQQKAAARK 500
BLAST of NO28G00020 vs. NCBI_GenBank
Match: OEL36465.1 (F-box protein [Dichanthelium oligosanthes]) HSP 1 Score: 313.9 bits (803), Expect = 1.100e-81 Identity = 187/470 (39.79%), Postives = 267/470 (56.81%), Query Frame = 0
Query: 86 VRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSLP--AVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLEE--ETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQARRVRE 552
V+P+G+ L + R G +PD+ L+ L LL A LA LS S+ Y A A+ +W++LVL L G D+ GSW+ATY+ + +FS R IP +L YSD L+ + A E L R +I R R +VE+F A+ E PN P +LEG ++GWPA ++W R D + G + + +S T+ Y YA Q++ PLY+FD++F +K P + +DY +P YF++ D F++LG RPD+RW+I GP GSGS+FH DPN+T+AWNA++KG KKW++FPP ++PPGVHPS DG ++ +PV++ EW FY A + W + +E VC GE++FVP GWWHLV+N EES+AITQNYVSR NL +VL FL++ + LVSG DR L+ +F + P ++Q Q E Q R+
Sbjct: 56 VQPLGNLL---LSSSPRGNLRDAGLGALRPLPDDLLLDV-LGLLPARDLAALSAASKGLYVVA-AHDPLWRALVLDEL----------GGAFDFAGSWRATYI----AAAAAFSGG---RPHLIPPRALKIRGFYSDYLFQSW-LCANMEMRHEWLAR---DNIERRRGVSVEQFIAEVEEPNRPVLLEGCIDGWPALQKWSR-----DYLLEISAGKEFAV--GPVSMTLDRYFRYADNVQEERPLYLFDAKFAEKVPEMGRDY--EVPVYFRE--DLFSVLGEERPDYRWVIIGPAGSGSSFHVDPNSTSAWNAIIKGSKKWVMFPPEVVPPGVHPSADGAEVTSPVSIMEWFMNFYG---ACKTWEKRPIECVCRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKKPNASELVSG--TKDRVNLHEKFHGAIEAAHPGMINQLQLEAQQKAAARK 483
BLAST of NO28G00020 vs. NCBI_GenBank
Match: OQR91992.1 (histone arginine demethylase [Thraustotheca clavata]) HSP 1 Score: 312.8 bits (800), Expect = 2.500e-81 Identity = 181/453 (39.96%), Postives = 249/453 (54.97%), Query Frame = 0
Query: 82 HPYSVRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWY--CYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSLPAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKP-----TVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLEEETHLVSGLPDADRPLLYSRFVEV 528
HP V+P G+ + + C G G A + D L F + L LA S SRAWY CY Y W++ VL + K +W+ +Y++ L + T ++H+ + YSD+ + PY EK LL +I + + +VE+F Q E PNLP +L V+ WPA + W D + GDT + G T+ Y YA+ DD PL+IFD F P LA+DY +P YFQ D+F LLGT RPD+RW I+GPKGSGS+FH DPN+T AWNA+++G KKWI+FPP I+PPGVHPSDDG +++TPV+L EW FYS ++ +E V EGEI+FVP+GWWHLV+N EE LAITQN+V +++L LSFL ++ VSG+P+ +RP LY++F +V
Sbjct: 15 HPLGVKPWGN--SFNDMDKGIVPCRGRGLGRLAALADTNLNAIFDY-LTPKDLALTSTTSRAWYVLCYHDEY---WRTFVLEQF----------NGQFTPKSTWRRSYIATL------VPTDTLNVKEHVKVEGF---YSDLFFQPYYCAQAPEK----LLSNHSMNIETIPRVDGNSLSVEDFEKQYEKPNLPVILTNVVTSWPAMKLWN------DEYLYKTCGDT-KFYAGGFHMTMQQYLNYARTLHDDQPLFIFDKNFSSTVPQLAKDY--SVPKYFQ--TDFFKLLGTERPDYRWFIFGPKGSGSSFHIDPNSTCAWNAIIRGAKKWIMFPPDIVPPGVHPSDDGGEVSTPVSLMEWFVTFYSQIKSKSPVH---LEGVVREGEIIFVPKGWWHLVLNIEECLAITQNFVCKSSLMDTLSFLTDKPDQVSGVPEEERPKLYNKFRKV 424
BLAST of NO28G00020 vs. NCBI_GenBank
Match: XP_004979531.1 (F-box protein At5g06550 [Setaria italica] >KQK95017.1 hypothetical protein SETIT_026250mg [Setaria italica]) HSP 1 Score: 312.0 bits (798), Expect = 4.300e-81 Identity = 186/478 (38.91%), Postives = 267/478 (55.86%), Query Frame = 0
Query: 86 VRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLS--------LLPSRPLSFSSSTHQRQQHIPLHSLPAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLEE--ETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQARRVRETE 554
V+P+G+ T R G +PD+ L+ L LL A LA LS S+A Y A A+ +W++ VL L G D+ GSW+ TY++ L+P R L + YSD L+ + A E L R +I R R +VE+F A+ E PN P +LEG ++GWPA ++W RE L ++A G + + +S T+ Y YA Q++ PLY+FD++F +K P + +DY +P YF++ D F++LG RPD+RW+I GP GSGS+FH DPN+T+AWNA++KG KKW++FPP ++PPGVHPS DG ++ +PV++ EW FY A + W + +E VC GE++FVP GWWHLV+N EES+AITQNYVSR NL +VL FL++ + LVSG DR L+ +F + P ++Q Q E Q R+ +
Sbjct: 61 VQPLGNLFLAATP---RANLRDAGLGALRPLPDDLLLDV-LGLLPARDLAALSAASKALYVVA-AHDPLWRAFVLDEL----------GGAFDFAGSWRTTYIAAASGGQPHLIPPRAL----------------KIRGFYSDYLFQSW-LCANMEMRHEWLAR---DNIERRRGISVEQFIAEVEEPNRPVLLEGCIDGWPALQKWSRE--YLLEISA---GKEFAV--GPVSMTLDRYFRYADNVQEERPLYLFDAKFAEKVPEMGRDY--EVPVYFRE--DLFSVLGEERPDYRWVIIGPAGSGSSFHVDPNSTSAWNAIIKGSKKWVMFPPEVVPPGVHPSADGAEVTSPVSIMEWFMNFYG---ACKTWEKRPIECVCRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKKPNASELVSG--TKDRVNLHDKFCGAIEATHPGMINQLQLEAQQKAAARKKQ 487
BLAST of NO28G00020 vs. NCBI_GenBank
Match: XP_024361963.1 (F-box protein At5g06550-like isoform X2 [Physcomitrella patens] >PNR29461.1 hypothetical protein PHYPA_028154 [Physcomitrella patens]) HSP 1 Score: 312.0 bits (798), Expect = 4.300e-81 Identity = 195/479 (40.71%), Postives = 274/479 (57.20%), Query Frame = 0
Query: 74 RERKHG---GRHPYSVRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSLPAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLE--EETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQAR 548
+E ++G G H Y ++P+G+ L +VR GLG T + DE ++ L LD LARL+ SRA+Y +AH +W++LVL S L +KG WK TYL+ S + + + H+PL + YSD L+ + A E +K L +I R +VE+F E N P +L GVME WPA ++W RE L + GD G + + Y YA +++ PLYIFDS+F +K P LA DY +P YF++ D F +LG RPD+RWLI GP SGS+FH DPN+T+AWNAV++G KKW+++PP ++PPGV PS DG D+ATPV++TEW FY + E +E +C EGE++FVPRGWWH+V+N EES+AITQN+VSR+N+ +VL FL HLVSG DR LY +F + P ++ +A +E+ +AR
Sbjct: 125 QENQYGLQRGSHSYGIQPLGNLLLSTQGCNVRD--TGLG--TLQVLSDE-IICDILGNLDGRDLARLALVSRAFYVFAH-QDSLWRNLVLDSYK----------GELAFKGCWKTTYLA---------SHALNVGKLHLPL-KVKDFYSDYLFQSW-LCANLE-IKPEWL--SADNIERRENLSVEDFIRDFEEQNKPVLLRGVMESWPALKKWDREYLL------KHAGDVDFAAG-PIHLKLSDYYKYADLVEEERPLYIFDSKFAEKVPQLAADY--DVPIYFRE--DLFRILGEERPDYRWLIAGPARSGSSFHIDPNSTSAWNAVVRGAKKWVMYPPEVVPPGVFPSPDGADVATPVSITEWFMNFYGETKKR---AERPIECICREGEVVFVPRGWWHIVINLEESIAITQNFVSRSNILNVLEFLSRPNSQHLVSG--TKDRVNLYEKFRSRYESLYPGSV-EAIKEKTEAR 556
BLAST of NO28G00020 vs. NCBI_GenBank
Match: XP_024361962.1 (F-box protein At5g06550-like isoform X1 [Physcomitrella patens]) HSP 1 Score: 312.0 bits (798), Expect = 4.300e-81 Identity = 195/479 (40.71%), Postives = 274/479 (57.20%), Query Frame = 0
Query: 74 RERKHG---GRHPYSVRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSLPAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLE--EETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQAR 548
+E ++G G H Y ++P+G+ L +VR GLG T + DE ++ L LD LARL+ SRA+Y +AH +W++LVL S L +KG WK TYL+ S + + + H+PL + YSD L+ + A E +K L +I R +VE+F E N P +L GVME WPA ++W RE L + GD G + + Y YA +++ PLYIFDS+F +K P LA DY +P YF++ D F +LG RPD+RWLI GP SGS+FH DPN+T+AWNAV++G KKW+++PP ++PPGV PS DG D+ATPV++TEW FY + E +E +C EGE++FVPRGWWH+V+N EES+AITQN+VSR+N+ +VL FL HLVSG DR LY +F + P ++ +A +E+ +AR
Sbjct: 132 QENQYGLQRGSHSYGIQPLGNLLLSTQGCNVRD--TGLG--TLQVLSDE-IICDILGNLDGRDLARLALVSRAFYVFAH-QDSLWRNLVLDSYK----------GELAFKGCWKTTYLA---------SHALNVGKLHLPL-KVKDFYSDYLFQSW-LCANLE-IKPEWL--SADNIERRENLSVEDFIRDFEEQNKPVLLRGVMESWPALKKWDREYLL------KHAGDVDFAAG-PIHLKLSDYYKYADLVEEERPLYIFDSKFAEKVPQLAADY--DVPIYFRE--DLFRILGEERPDYRWLIAGPARSGSSFHIDPNSTSAWNAVVRGAKKWVMYPPEVVPPGVFPSPDGADVATPVSITEWFMNFYGETKKR---AERPIECICREGEVVFVPRGWWHIVINLEESIAITQNFVSRSNILNVLEFLSRPNSQHLVSG--TKDRVNLYEKFRSRYESLYPGSV-EAIKEKTEAR 563
BLAST of NO28G00020 vs. NCBI_GenBank
Match: KZV48987.1 (calcium-dependent protein kinase 20-like [Dorcoceras hygrometricum]) HSP 1 Score: 311.6 bits (797), Expect = 5.600e-81 Identity = 187/482 (38.80%), Postives = 274/482 (56.85%), Query Frame = 0
Query: 82 HPYSVRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSLPAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLEEET--HLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQARRVRETEEEKMKAGW 562
H + V+P+G+ + +A V R GLG T+ DE ++ L LL L LS S+++Y + + + +W+S+VL E +G L YKGSW+ TYL F S + I + + YSD L+ + A E +K L R +I R + +VEEF E PN P +LEG M+ WPA ++W +R L +V + K + + Y Y+ + +++ PLY+FD +F++K P L DY P YF + D F++LG RPD+RW+I GP GSGS+FH DPN+T+AWNAV+KG KKW+LFPP ++PPGVHPS DG ++A PV++ EW FY+D + W++ +E VC+ GE++FVP GWWHLV+N E+S+AITQN+VSR N+ +VL FL+ LVSG DR L+ +F + P LDQ L+ + +T++EK + W
Sbjct: 69 HSHGVQPLGN--LYFSASSVNSRNTGLG--NLQTLTDEVILEV-LGLLSGTELGILSTVSKSFYVFCN-HEPLWRSIVL---------ESCKGGFL-YKGSWRHTYLG-------EFKCSCVMGKSGIKVRNF---YSDYLFQSW-LCANLE-MKPEWLER--DNIARRKGISVEEFLLNFEEPNKPVLLEGCMDNWPALKKW--DRDYLLKVCEDVK-----FSAGPVEMKLDDYFRYSDQVREERPLYLFDPKFVEKVPQLGVDY--DTPAYFNE--DLFSVLGDERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPPGVHPSPDGAEVACPVSIIEWFMNFYADT---KSWKKKPIECVCKAGEVVFVPNGWWHLVINLEDSIAITQNFVSRRNILNVLDFLKRPNACTLVSG--TRDRVSLHEKFKNAIESYLPGVLDQ-----LRMKAQEKTDQEKKLSFW 499
BLAST of NO28G00020 vs. NCBI_GenBank
Match: PAN43138.1 (hypothetical protein PAHAL_H01422 [Panicum hallii] >PAN43139.1 hypothetical protein PAHAL_H01422 [Panicum hallii] >PAN43140.1 hypothetical protein PAHAL_H01422 [Panicum hallii]) HSP 1 Score: 311.6 bits (797), Expect = 5.600e-81 Identity = 188/470 (40.00%), Postives = 271/470 (57.66%), Query Frame = 0
Query: 86 VRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSL--PAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLE--EETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQARRVRE 552
V+P+G+ L + R GLG +PD+ L+ L LL A LA LS S+A Y A A+ +W++LVL G G D+ GSW+ATY+ ++++ R IP +L YSD L+ + A E L R +I R R +VE+F A+ E PN P +LEG ++ WPA ++W RE L ++A G + + +S T+ Y YA Q++ PLY+FD++F +K P + +DY +P YF++ D F++LG RPD+RW+I GP GSGS+FH DPN+T+AWNA++KG KKW++FPP ++PPGVHPS DG ++ +PV++ EW FY A + W + +E +C GE++FVP GWWHLV+N EES+AITQNYVSR NL +VL FL+ + LVSG DR L+ +F + P ++Q Q E Q R+
Sbjct: 68 VQPLGNLLL-SASPGANLRDAGLG--ALRPLPDDLLLDV-LGLLPARALAALSAASKALYVVA-AHDPLWRALVL----------GELGGAFDFAGSWRATYV----------AAASGGRPHLIPPRALRIRGFYSDYLFQSW-LCANMEMRHEWLAR---DNIERRRGVSVEQFIAEVEEPNRPVLLEGCLDSWPALQKWSRE--YLLEISA---GKEFAV--GPVSMTLDRYFRYADNVQEERPLYLFDAKFAEKVPEMGRDY--EVPVYFRE--DLFSVLGEERPDYRWVIIGPAGSGSSFHVDPNSTSAWNAIIKGAKKWVMFPPEVVPPGVHPSADGAEVTSPVSIMEWFMNFYG---ACKTWEKRPIECICRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNASELVSG--TKDRVNLHDKFRGAIDAAHPGMINQLQFEAQQKAAARK 492
BLAST of NO28G00020 vs. NCBI_GenBank
Match: PUZ45280.1 (hypothetical protein GQ55_8G209300 [Panicum hallii var. hallii]) HSP 1 Score: 311.6 bits (797), Expect = 5.600e-81 Identity = 188/470 (40.00%), Postives = 270/470 (57.45%), Query Frame = 0
Query: 86 VRPMGDYLAHGTAEDVRHRCNGLGPSTFATVPDEALVHTFLFLLDAATLARLSRCSRAWYCYAHAYTDVWKSLVLTSLAESECGEGSEGARLDYKGSWKATYLSLLPSRPLSFSSSTHQRQQHIPLHSL--PAVYSDVLYAPYGAVARFEKVKARLLRRREKDILRLRKPTVEEFRAQCEAPNLPCVLEGVMEGWPARREWGRERGLLDRVTAEGKGDTYTLHGNGLSFTVPAYSTYAQEQQDDLPLYIFDSRFLDKCPALAQDYIPFLPPYFQQDADYFALLGTHRPDHRWLIWGPKGSGSTFHKDPNATAAWNAVLKGRKKWILFPPHIIPPGVHPSDDGLDLATPVTLTEWVEGFYSDATAEQGWRESVVEAVCEEGEIMFVPRGWWHLVVNTEESLAITQNYVSRANLPHVLSFLE--EETHLVSGLPDADRPLLYSRFVEVLRRVCPKALDQAQEERLQARRVRE 552
V+P+G+ L + R GLG +PD+ L+ L LL A LA LS S+A Y A A+ +W++LVL G G D+ GSW+ATY+ ++++ R IP +L YSD L+ + A E L R +I R R +VE+F A+ E PN P +LEG ++ WPA ++W RE L ++A G + + +S T+ Y YA Q++ PLY+FD++F +K P + +DY +P YF++ D F++LG RPD+RW+I GP GSGS+FH DPN+T+AWNA++KG KKW++FPP ++PPGVHPS DG ++ +PV++ EW FY A + W + +E +C GE++FVP GWWHLV+N EES+AITQNYVSR NL VL FL+ + LVSG DR L+ +F + P ++Q Q E Q R+
Sbjct: 68 VQPLGNLLL-SASPGANLRDAGLG--ALRPLPDDLLLDV-LGLLPARALAALSAASKALYVVA-AHDPLWRALVL----------GELGGAFDFAGSWRATYV----------AAASGGRPHLIPPRALRIRGFYSDYLFQSW-LCANMEMRHEWLAR---DNIERRRGVSVEQFIAEVEEPNRPVLLEGCLDSWPALQKWSRE--YLLEISA---GKEFAV--GPVSMTLDRYFRYADNVQEERPLYLFDAKFAEKVPEMGRDY--EVPVYFRE--DLFSVLGEERPDYRWVIIGPAGSGSSFHVDPNSTSAWNAIIKGAKKWVMFPPEVVPPGVHPSADGAEVTSPVSIMEWFMNFYG---ACKTWEKRPIECICRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLDVLDFLKRPNASELVSG--TKDRVNLHDKFHGAIEAAHPGMINQLQLEAQQKAAARK 492 The following BLAST results are available for this feature:
BLAST of NO28G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00020 ID=NO28G00020|Name=NO28G00020|organism=Nannochloropsis oceanica|type=gene|length=3769bpback to top protein sequence of NO28G00020.3 >NO28G00020.3-protein ID=NO28G00020.3-protein|Name=NO28G00020.3|organism=Nannochloropsis oceanica|type=polypeptide|length=466bpback to top protein sequence of NO28G00020.2 >NO28G00020.2-protein ID=NO28G00020.2-protein|Name=NO28G00020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=486bpback to top protein sequence of NO28G00020.1 >NO28G00020.1-protein ID=NO28G00020.1-protein|Name=NO28G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=643bpback to top Synonyms
Publications
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