NO27G01760, NO27G01760 (gene) Nannochloropsis oceanica

Overview
NameNO27G01760
Unique NameNO27G01760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3719
Alignment locationchr27:591179..594897 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein kinase, catalytic domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:591179..594897 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
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BLAST of NO27G01760 vs. NCBI_GenBank
Match: EWM20318.1 (Protein kinase, catalytic domain protein [Nannochloropsis gaditana])

HSP 1 Score: 352.1 bits (902), Expect = 2.100e-93
Identity = 208/322 (64.60%), Postives = 235/322 (72.98%), Query Frame = 0 
Query:   31 VHKVVTEGEAVVAKFFDDYPFHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAEAIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKDLFKNGILSSFVIKIGDFGQCEFDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTSLHGLAFYYIYGLTLAFLQPCAFTSAQDRPTQITTRMPVDVLRFLKDEVAPTL 353
            V+KV  +GE +  K FD +PFHE CGN++ TSLLG GGGGPFYVRTLDIG+SVD K +II+ME++E DAE IDLDEP NL+ LLYQVA+GVEQLRR A LQHFDLR+DNIMVK+LPEPKD+F+NG+LSSF++KIGDFGQCE                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               N DIPRE E+TRKWG+YPRTY+GYDIQYFLGTLTPVL SLHGL FYYIY LTLAFLQPC+FTSAQDRP  IT+RMPVDVLRFLK+E+ PTL
Sbjct:   74 VYKVTAQGETLAVKIFDCFPFHEACGNIIATSLLGPGGGGPFYVRTLDIGRSVDEKHYIILMEYLEHDAEEIDLDEPSNLFTLLYQVAYGVEQLRRAAHLQHFDLRFDNIMVKLLPEPKDIFQNGVLSSFIVKIGDFGQCE------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPQYLPQVEAGKAQCNGNGNAAAVTAPHRPINTDIPREPEFTRKWGAYPRTYTGYDIQYFLGTLTPVLGSLHGLDFYYIYKLTLAFLQPCSFTSAQDRPVHITSRMPVDVLRFLKEEIMPTL 365
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BLAST of NO27G01760 vs. NCBI_GenBank
Match: EWM20319.1 (Protein kinase, catalytic domain protein [Nannochloropsis gaditana])

HSP 1 Score: 314.3 bits (804), Expect = 4.800e-82
Identity = 190/298 (63.76%), Postives = 214/298 (71.81%), Query Frame = 0 
Query:   31 VHKVVTEGEAVVAKFFDDYPFHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAEAIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKDLFKNGILSSFVIKIGDFGQCEFDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTSLHGLAFYYIYGLTLAFLQPCAFTSAQDR 329
            V+KV  +GE +  K FD +PFHE CGN++ TSLLG GGGGPFYVRTLDIG+SVD K +II+ME++E DAE IDLDEP NL+ LLYQVA+GVEQLRR A LQHFDLR+DNIMVK+LPEPKD+F+NG+LSSF++KIGDFGQCE                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               N DIPRE E+TRKWG+YPRTY+GYDIQYFLGTLTPVL SLHGL FYYIY LTLAFLQPC+FTSAQDR
Sbjct:   74 VYKVTAQGETLAVKIFDCFPFHEACGNIIATSLLGPGGGGPFYVRTLDIGRSVDEKHYIILMEYLEHDAEEIDLDEPSNLFTLLYQVAYGVEQLRRAAHLQHFDLRFDNIMVKLLPEPKDIFQNGVLSSFIVKIGDFGQCE------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPQYLPQVEAGKAQCNGNGNAAAVTAPHRPINTDIPREPEFTRKWGAYPRTYTGYDIQYFLGTLTPVLGSLHGLDFYYIYKLTLAFLQPCSFTSAQDR 341
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BLAST of NO27G01760 vs. NCBI_GenBank
Match: XP_005853970.1 (hypothetical protein NGA_0483810, partial [Nannochloropsis gaditana CCMP526] >EKU22390.1 hypothetical protein NGA_0483810, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 127.1 bits (318), Expect = 1.100e-25
Identity = 64/120 (53.33%), Postives = 80/120 (66.67%), Query Frame = 0 
Query:   16 ASMQINPLSIPSLLPVHKVVTEGEAVVAKFFDDYPFHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAEAIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDL 136
            A + + P+S      V +V  +GE + AK FD +PFHE CGN++ TSLLG GGGGPFYVRTLDIG+SVD K +II+ME+++ DAE                VA+GVEQLRR A LQHFDL
Sbjct:   27 APILMKPMSRALAPLVTQVTAQGETLAAKIFDCFPFHEACGNIIATSLLGPGGGGPFYVRTLDIGRSVDEKHYIILMEYLKHDAE----------------VAYGVEQLRRAAHLQHFDL 130
[Close]
BLAST of NO27G01760 vs. NCBI_GenBank
Match: XP_005853368.1 (hypothetical protein NGA_0483820 [Nannochloropsis gaditana CCMP526] >EKU22990.1 hypothetical protein NGA_0483820 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 126.7 bits (317), Expect = 1.400e-25
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0 
Query:   34 VVTEGEAVVAKFFDDYPFHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAEAIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLR 137
            V  +GE + AK FD +PFHE CGN++ TSLLG GGGGPFYVRTLDIG+SVD K +II+ME+++ DAE                VA+GVEQLRR A LQHFDLR
Sbjct:   20 VTAQGETLAAKIFDCFPFHEACGNIIATSLLGPGGGGPFYVRTLDIGRSVDEKHYIILMEYLKHDAE----------------VAYGVEQLRRAAHLQHFDLR 106
The following BLAST results are available for this feature:
BLAST of NO27G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 4
Match NameE-valueIdentityDescription
EWM20318.12.100e-9364.60Protein kinase, catalytic domain protein [Nannochl... [more]
EWM20319.14.800e-8263.76Protein kinase, catalytic domain protein [Nannochl... [more]
XP_005853970.11.100e-2553.33hypothetical protein NGA_0483810, partial [Nannoch... [more]
XP_005853368.11.400e-2559.22hypothetical protein NGA_0483820 [Nannochloropsis ... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01760.6NO27G01760.6Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G01760.5NO27G01760.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G01760.4NO27G01760.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G01760.3NO27G01760.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G01760.2NO27G01760.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G01760.1NO27G01760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01760.6NO27G01760.6-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G01760.5NO27G01760.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G01760.4NO27G01760.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G01760.3NO27G01760.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G01760.2NO27G01760.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G01760.1NO27G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01760 ID=NO27G01760|Name=NO27G01760|organism=Nannochloropsis oceanica|type=gene|length=3719bp
CAGCAACAGGGCCATAGCGTCGCAGAATGGGCCCTTCAAACTCGGGGAGC
AACGACAGTAGTGGCAGCATGTCCAAGTTCAGgtagctaggagtgaaacg
ctggaggagtatgggaaggaggagggaaagacgggtagcgaggggaggag
gtagcattgtgccaccccaagggtgggactagagtagccaacatcgttac
tttcactcgaatgcatggacgaatgctctcgtgtatttcccctctcattt
tgaatgacattacatgagaaaagcgaacaagggagtgatgagctgggaag
aagaaagctccaaagactcacgtctccctccccacacaaatgcattttgc
cctgtatagAAATGAGGTCCGAATGCAAAAACTCTTGCACGCATTTCGAA
GGGGGGACAGGGTTGCAATGGAGGAGgtaaaaagaatgataggggtacca
agaatctgcaccaggaaattacaatcatcattcttccttccctccttcct
tcccttcttccttccgttcctccctcctgtcccccccttccgtactacca
aagCACATAAGCAGCCGCGCGGAGAATAGCAAGCTCCACCGGAAGCTTCG
AGGAAAGGATGCCGTATGGGAGGGATTGAAGGAGGGCGTGGTCTACAAAg
taccgagggcgggagggagggaggacgggaaggtgggagatgaaggtgga
tgcctcctcgaccccgcattttctacccatcccgtgattcaattgcctct
atgcaaatcaaccctctatccatcccctccctcctccccgtgcacaagGT
GGTGACGGAGGGCGAGGCTGTAGTGGCTAAATTCTTCGACGACTACCCCT
TCCATGAGATATGCGGAAATGTGGTAGGGACGAGCCTCCTGGGGCAGgtg
cgtcccctccctccctccctccctccctccctccctccctccttccttcc
ctccctccctccctccctccctccctccctccttccttccctccctctct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctcccccccc
cctccctccctccctccctcccccccccctccccccctccctccctccct
ccttccttccctccctccctccttcgctagtaataaaatctgaaatctgt
gggtggatggaggggccctacctctgagcgcccctgtttccttttgatgc
cttatcttccttccctccctccctccctccctccctccctctccccctcc
ctccttccctctcaagtcatcatttcaaccccccctccctccctccctcc
ctccctccctccctccctccctccctccctccccctctttcttagGGCGG
CGGTGGTCCCTTCTACGTTCGCACTCTCGACATTGGCAAGAGCGTGGATA
ACAAGCAGTTCATCATTGTCATGGAGTTCATAGAGGCCGATGCTGAGgtc
cgttttgcccctctctccctccttccctccctccctccctccctccctcc
cgcttaccctcccggacagtttctgaactatcctcatcccttcatttaca
ccctccctccctccctccctccctcagGCCATTGACCTCGATGAGCCCAT
TAATCTGTACAACCTTCTCTATCAGgtaagttccccccttccttccctcc
ctccctccctccctccctgccctctgccctacctcctttccttcctccct
ccctcccactgagttcataccctccctccctccctccctccctccctccc
cccctccctccctcagGTAGCCTTTGGAGTAGAGCAGCTCCGACGCACCG
CCGGCCTCCAACATTTCGATCTCCGGTACCTCTTCCATCACTACCCCTCC
GCCCATCCCTCCGTCCAACCCTCCATCCATCCCTCCTTCCCTCTCTCCTT
CCTCCCCCTCATGTCCATCTGCTCGAGTCCTACTTCCTCCCTCACCGACG
ACCTCCACCTCCCTCCGTCCCTCCCTCCCTCCCTCCCTCCCTCCGTAGCT
ACGACAACATCATGGTCAAAGTCCTCCCTGAGCCCAAGGACTTGTTTAAG
AATGGCATCCTCTCCTCCTTCGTCATCAAAATCGGCGATTTCGGACAAGT
ACATGTCTCCTCCTTCCCTCCCTTCCTCCCTCTCTCCCTTCTTTCCTTTT
CCCCTCCCTCTCTTCCTTTCTCCCTCCCGAACGGGTCCACTTGAATGAGC
CTTGAGTGAAACACAACGGTGAGAAAGGCACATTTCATCCGACCGACATA
TCCCTCCCTCCTCTCCTCCCTCCCTCCCTTCCTCCTTTCTAGTGCGAGTT
TGACTTCCCTCCCCATCCAACCTCCTCCTCCGCCTCCTCCTCCTCCTCAT
CCGCAGCTAAAGCAATAGCAGTGCCACCCCCAACACCCCCACCACCAGCG
GCAGCAGCAGTAGCAGCTGTAGGAAGCAAAAGAAAACAGAGGTGGGGCGA
GGAGGAGGACAGAGAAGGTCAGGAGAAAAGAGAGGGCAATGGCGGCAGGA
AGAAGGAGGAGGAGGGGGAGGGGGAGGGGGAGGAGGAAGAGAGGGAGGAG
GAGACACGTCGGCCACGAAACGTCGACATTCCACGGGAAGACGAATACAC
TCGGAAATGGGGCTCTTACCCACGCACCTACTCAGgtatttatctatcct
tccctcctgccctcctccctgccctccctccctccctccctccctccgtc
atggcaggcctccctctctttcctagtcttacccttcctctctatccagc
tccctccctcccttcctccctccctcctccccctcctcgaaaggttacga
catatagtattttctcgaaatccttactcccgtgctatccccctccctcc
ctccctccctccctccctccctccctccctccctcccttcccagGCTACG
ACATCCAATATTTCCTCGGTACCCTCACGCCCGTGTTGACCTCTCTGCAT
GGGCTGGCTTTCTACTACATTTATGGCCTGACCCTCGCATTCCTCCAGCC
CTGCGCGTTCACCAGCGCCCAAGACCGgtatgcccctcccctcccttcct
ccctcccttcctccctccccttctccctcatcttccctccctcatctcct
attcctcgaaaatttgagcgctgccctggagctgttctgtgatgtctcat
ccctctttccctccctccttcccgccctccctcccttcctccctcctgcc
ctccctctagACCGACGCAAATCACTACCCGGATGCCTGTTGATGTCCTT
CGCTTCCTCAAGGACGAAGTTGCTCCCACGCTTTAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGAAGAGGAGTCCTTCGCCAGCCTGCCTGCATCTTGA
GAACTCGTGAAGATGAGAGTATACTCAAGACGCTGGTCATGTGTCATCAC
CCCGATATGGCATTTACGGATGTATACATCCATCTCTGTGACGATTCGGT
ATTTGCCCTATTTGTCGTGCACCAAAAGAAATCCGTGAGCCGGTCGGATC
CTTCCCAAACCCGCGAGGATAATGGCATCATAAAGACGTCGGTGATATGA
TAGCCCCTGTATGGCATGCACGGGCAGGAGTGATAGTCATTAGGTTTCCC
TTTCAGTGTAATCAAGAAGCGCGGGGTCTAACCCTAAAAATAAATTAATT
ACAAAGTACAAGACAAGGA
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protein sequence of NO27G01760.6

>NO27G01760.6-protein ID=NO27G01760.6-protein|Name=NO27G01760.6|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MPPRPRIFYPSRDSIASMQINPLSIPSLLPVHKVVTEGEAVVAKFFDDYP
FHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAE
AIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKD
LFKNGILSSFVIKIGDFGQCEFDFPPHPTSSSASSSSSSAAKAIAVPPPT
PPPPAAAAVAAVGSKRKQRWGEEEDREGQEKREGNGGRKKEEEGEGEGEE
EEREEETRRPRNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTS
LHGLAFYYIYGLTLAFLQPCAFTSAQDRPTQITTRMPVDVLRFLKDEVAP
TL*
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protein sequence of NO27G01760.5

>NO27G01760.5-protein ID=NO27G01760.5-protein|Name=NO27G01760.5|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MPPRPRIFYPSRDSIASMQINPLSIPSLLPVHKVVTEGEAVVAKFFDDYP
FHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAE
AIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKD
LFKNGILSSFVIKIGDFGQCEFDFPPHPTSSSASSSSSSAAKAIAVPPPT
PPPPAAAAVAAVGSKRKQRWGEEEDREGQEKREGNGGRKKEEEGEGEGEE
EEREEETRRPRNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTS
LHGLAFYYIYGLTLAFLQPCAFTSAQDRPTQITTRMPVDVLRFLKDEVAP
TL*
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protein sequence of NO27G01760.4

>NO27G01760.4-protein ID=NO27G01760.4-protein|Name=NO27G01760.4|organism=Nannochloropsis oceanica|type=polypeptide|length=300bp
MGPSNSGSNDSSGSMSKFRNEVRMQKLLHAFRRGDRVAMEEHISSRAENS
KLHRKLRGKDAVWEGLKEGVVYKVVTEGEAVVAKFFDDYPFHEICGNVVG
TSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAEAIDLDEPINL
YNLLYQVAFGVEQLRRTAGLQHFDLRYLFHHYPSAHPSVQPSIHPSFPLS
FLPLMSICSSPTSSLTDDLHLPPSLPPSLPPSVATTTSWSKSSLSPRTCL
RMASSPPSSSKSAISDKYMSPPSLPSSLSPFFPFPLPLFLSPSRTGPLE*
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protein sequence of NO27G01760.3

>NO27G01760.3-protein ID=NO27G01760.3-protein|Name=NO27G01760.3|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MPPRPRIFYPSRDSIASMQINPLSIPSLLPVHKVVTEGEAVVAKFFDDYP
FHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAE
AIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKD
LFKNGILSSFVIKIGDFGQCEFDFPPHPTSSSASSSSSSAAKAIAVPPPT
PPPPAAAAVAAVGSKRKQRWGEEEDREGQEKREGNGGRKKEEEGEGEGEE
EEREEETRRPRNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTS
LHGLAFYYIYGLTLAFLQPCAFTSAQDRPTQITTRMPVDVLRFLKDEVAP
TL*
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protein sequence of NO27G01760.2

>NO27G01760.2-protein ID=NO27G01760.2-protein|Name=NO27G01760.2|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MPPRPRIFYPSRDSIASMQINPLSIPSLLPVHKVVTEGEAVVAKFFDDYP
FHEICGNVVGTSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAE
AIDLDEPINLYNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKD
LFKNGILSSFVIKIGDFGQCEFDFPPHPTSSSASSSSSSAAKAIAVPPPT
PPPPAAAAVAAVGSKRKQRWGEEEDREGQEKREGNGGRKKEEEGEGEGEE
EEREEETRRPRNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTS
LHGLAFYYIYGLTLAFLQPCAFTSAQDRPTQITTRMPVDVLRFLKDEVAP
TL*
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protein sequence of NO27G01760.1

>NO27G01760.1-protein ID=NO27G01760.1-protein|Name=NO27G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=393bp
MGPSNSGSNDSSGSMSKFRNEVRMQKLLHAFRRGDRVAMEEHISSRAENS
KLHRKLRGKDAVWEGLKEGVVYKVVTEGEAVVAKFFDDYPFHEICGNVVG
TSLLGQGGGGPFYVRTLDIGKSVDNKQFIIVMEFIEADAEAIDLDEPINL
YNLLYQVAFGVEQLRRTAGLQHFDLRYDNIMVKVLPEPKDLFKNGILSSF
VIKIGDFGQCEFDFPPHPTSSSASSSSSSAAKAIAVPPPTPPPPAAAAVA
AVGSKRKQRWGEEEDREGQEKREGNGGRKKEEEGEGEGEEEEREEETRRP
RNVDIPREDEYTRKWGSYPRTYSGYDIQYFLGTLTPVLTSLHGLAFYYIY
GLTLAFLQPCAFTSAQDRPTQITTRMPVDVLRFLKDEVAPTL*
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Synonyms
Publications