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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr27 | genome | chr27:92119..98520 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO27G00270 vs. NCBI_GenBank
Match: XP_024383531.1 (trichohyalin-like [Physcomitrella patens] >XP_024383532.1 trichohyalin-like [Physcomitrella patens] >PNR49830.1 hypothetical protein PHYPA_011726 [Physcomitrella patens]) HSP 1 Score: 76.6 bits (187), Expect = 2.900e-10 Identity = 56/192 (29.17%), Postives = 92/192 (47.92%), Query Frame = 0
Query: 286 TKRAEIFYNNNPGLQGAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAPLLGDHHSHWISGFISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYFAVCSSVAALMAIYLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCLAL---FHSNTLDLWISRVVQLLAVTVIGGLYYATVFTPA 475
T+ +E+F + + QGA + L+ S Q F + L S + P LG+ H+ ++ ISY L L+PL L +R L+ I+F ++Y AV + + A+ L +P+ +FHE + +Y+ QL+ ++ Y LQ L + T + VQ++ +VIG YY TVF A
Sbjct: 645 TQSSEMFQSKH---QGASKDDPDHLVKKINVFSVQTKTHFVKVNQDLASTITPFLGNRHAPAVASVISYCLLLLPLALIFFVCEQVREFLTLQKAILFANIYLAVHFELLLVAALGLGSEPMEIFHEFSTSSYLVLQLVQAFGYILYLTLQTADLTLAYAEGTAIAKSTSTVQIVVASVIGVHYYITVFLKA 833
BLAST of NO27G00270 vs. NCBI_GenBank
Match: OAE24767.1 (hypothetical protein AXG93_48s1150 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 75.9 bits (185), Expect = 4.900e-10 Identity = 48/186 (25.81%), Postives = 89/186 (47.85%), Query Frame = 0
Query: 299 LQGAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAPLLGDHHSHWISGFISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYFAVCSSVAALMAIYLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCLALF---HSNTLDLWISRVVQLLAVTVIGGLYYATVFTPAMFDHPPM 482
LQ + + P ++ S +FN + +K + PL+G ++ ++ +SYGL L+PL L + +RA+F L+ +++F ++Y A + A L +P+ F + +Y++ QL+ ++ + LQ L S + +S +Q + V +G YY TVF AM P+
Sbjct: 423 LQESAEHLKTNVRPDWDRLSTNGKDLFNQANEQIKESFTPLIGRDYAPVVAYLVSYGLLLLPLGLVMFLFERVRAIFSLQKVLLFINIYVAAYFAALVAAAFVLGSEPMDFFRNFSPSSYIFLQLLQAFGYIMFIILQTFDLITTCSSGRIAAKLSAALQWVVVVAVGFHYYVTVFHRAMAKAKPL 608
BLAST of NO27G00270 vs. NCBI_GenBank
Match: PTQ41126.1 (hypothetical protein MARPO_0036s0106 [Marchantia polymorpha]) HSP 1 Score: 75.9 bits (185), Expect = 4.900e-10 Identity = 48/186 (25.81%), Postives = 89/186 (47.85%), Query Frame = 0
Query: 299 LQGAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAPLLGDHHSHWISGFISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYFAVCSSVAALMAIYLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCLALF---HSNTLDLWISRVVQLLAVTVIGGLYYATVFTPAMFDHPPM 482
LQ + + P ++ S +FN + +K + PL+G ++ ++ +SYGL L+PL L + +RA+F L+ +++F ++Y A + A L +P+ F + +Y++ QL+ ++ + LQ L S + +S +Q + V +G YY TVF AM P+
Sbjct: 355 LQESAEHLKTNVRPDWDRLSTNGKDLFNQANEQIKESFTPLIGRDYAPVVAYLVSYGLLLLPLGLVMFLFERVRAIFSLQKVLLFINIYVAAYFAALVAAAFVLGSEPMDFFRNFSPSSYIFLQLLQAFGYIMFIILQTFDLITTCSSGRIAAKLSAALQWVVVVAVGFHYYVTVFHRAMAKAKPL 540
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00270 ID=NO27G00270|Name=NO27G00270|organism=Nannochloropsis oceanica|type=gene|length=6402bp
CAAAATACAAGGCCCTGGTACAGGTGCCCCCCTTCTCTCTTCTCTCACCC
CACCGAGGCGTTCGAGTAATTGATTGATCAAAGTACATTCACTGTCTTCT
GCTATGTGTATCTCTGTGTGTGTCTTCAAGTGCTTTATCATCCATTTCAC
ACCCCTCGATTGATGGGCAGCAGCAGCACAAAACCGATGTCTCGAATCCA
CCGCTTGGCCCATCATCTCAATACTTTTGCCATGCCCCTTCCCTTTCCCT
GTAACCCACACATTTCGGTCCACCAACCTCTAGTCTCGAAGGCAGAGTAG
ACCAGGTAGAGGCACTTCCAAGAGCCCTATCCCTAAGGCGCGCGCTGCGA
CACTCCTTCACTTGTGTATCTGCCTGCGCCAGTGCCCTCTTGTCCCTTGT
CTGTTTCACGCCCTCTTCTCACGTCACAGACACGCTGGCACTCAAAATAC
AGGGACACTCACCCATTGAGTAGGACTCAATAATGACCTCTCCTACCAGC
ACCTCCACCTTGTGCCGACGGCAGCGCCGTCGCAGTATCCTGCGGCCGTC
GTCGACCTTCTTCTTTCTTCTCCTAGCTGgtaggtaacaccccctttttg
acttccactcgtttccccttcctctctccactggtcacagcatattcaca
cactcacatacaatctgcgctccacaaacagTGTTTCTCCTCCTCCTTCC
TGTGGTGGTGAGGGCCGAAGGGGAAGCTGCGCCTGCTCCTGCCACTGATG
CTGCTGCTGTCGCCCCTCCTGCTCCTGCGGTGGACGAAGCGGCGAAGAAA
GCCGCTGAGgtaagaccaaaagggagagagagcgggagagaggagtgcaa
ggaagggagatagggtggaagggtgacgaaagtgagcagctgaaccggtt
ctgtagctgcaggaggaggaggaggaggaggaggaggaggagaaggagga
ggaggagaaaaagctacaactcattcgcttctgtgattctctttctcaca
gGAGGAGGCAGCCAAGAAGGCAGCCGATGAGGAAGCAGCGAAAAAGAAGG
CCGAGGAGgtaagtagaagacagaaagagagagggaggaagggagggaaa
taggatgcaataaaatgataaaaatgatgcgacagaaccggctattcacc
tttagcagcagtagcagaaggaggaggagggaaaggaggaggagaaagag
gaggagcagcagcagagcttataatttacatatttcatatttctacattt
ctgtctcccacaggaggaggcagccaagaaggcagccgatgaggaagcag
cgaaaaagaaggccgaggaggtaagtagaagacagaaagagagagggagg
aagggagggaaataggatgcaataaaatgataaaaatgatgcgacagaac
cggctattcacctttagcagcagtagcagaaggaggaggagggaaaggag
gaggagaaagaggaggagcagcagcagagcttataatttatatatttcat
atttctacatttctgtctcccacaggaggaggcagccaagaaggcagccg
atgaggaagcagcgaaaaagaaggccgaggaggtaagtagaagacagaaa
gagggagggaggaagggagaagggagggagggtgaaataagtgtgtttcc
atttcgctatgatgaaaatttaaggataaccaggcgtaataaattaccat
tattgcacgtctacctcatcttctgacgttttctccctgtgtctgttccg
ttttcttttagGAGGCCGCGGCCAAGAAGGTGGCTGATGAGGAGGAAGCG
AAAAAGAAGGCTGAGgtaggaagggggaagggaaaaaggaagagcacgag
ggagggaaggagggcgggaaacaacggcattccttgactcatttggacga
cagctttcgacttttgtttccaaaagcgtatacccacatccttccttcct
ccccccccttccccttccttcagGAGGAGGCGAAGAAAAAGATGGAGGAG
TCCGCTGCCGCTGTCGTGAGCACGGAGTCGGCGTCTGTCATGGTTGCCGA
GCTCGAGAAGGCTTTGAAAGgtacgtcctgtccttccctccttcccttcc
tccctctctccctccctccctctccctcttcctccttgatccgatcctcc
caatctccctccttccctccctccctccctccctccctccctccctctct
ccctccctctctccctccctcagCCGACAAGGAGAAACTCATCGGTGAGC
TCGAGGCCCTCAAGAAGACGATGGCGGAAAAAGAGGCTAAGATTAAGGAG
CTTGAGGAAGCCAAGACCAAAGCCGAGGGAGgtacgtccctctctctctc
cctcccttccttcttcccttcctccctccctccctccctttctgacactc
tcccacgtagcactcctcactccctccctcccttcctccctccctccctc
cctccctccctacctcagAGCGCGACGGCAAAGGCCGTGAGGTGGAAGAG
AAGAAGGCGCTGCTTGATACCTCCAACAAAGAGCTCGGAGAAGCCAGGAC
AAAGATTACGGCGTTGATGATCGTGCAGgtaggtaggtaggtagggaggg
agggagggagagagggagtgaggaagtgaggaagtgagggagggagggag
ggagagagggagtgagggaggaagggaggaagggagagatgaaaggaaag
tgaagtagaatctagaagaagacgtcatttcctggcaaatatagcatttg
acacacattttgaatttttctacttcccctccctccctccctccctccct
ccctccctcctctgtggtccagGAGGACCTGATGAAGCAGAAGGAGAACC
TTCACATGACCTACCAGGAGCTCCGCGACAAGTATGAGgtaggtttcccc
cctccctccctccctcccttccttcctcacacccagctaacccgccatcc
acctcatcctccctccctccctccctccctccctccctccctagAACCCC
GAGTTCCAGCATTACGTGACCAAACGCGCCGAGATTTTCTACAACAACAA
CCCCGGCCTGCAGGGAGCCGTGAACAAGgtgcgtgccctccctccctccc
tccctcccttgttgcctgccgtacattccgtccttccttattccttcaag
aaaaaacaagtctcctcggatccttccgccatcttcctcaccctccctct
ttctccctccctccctccctccctcttcctcccccttcctcagACCAGCG
AGCTCCTCATGCCTCACTTCGAAGCCGGCTCCAACCAGTACGCCATTATG
TTCAACAACACCCACAGCACCCTCAAGgtatcacccccccatctatgtgc
cctccctccctccctccctccctcctttccctcgtactcgagcaccgacc
cgtgttaagcttatcatgaccatctgcttcccctccctccctcgctccct
cagTCTAATCTAGCCCCTCTTCTTGGAGACCATCATTCGCATTGGATCTC
CGGATTTATCTCCTACGGCCTCTTCCTCGTCCCTCTCTTTCTCTCTGTTC
ACTCCCTCATCTCCATCCGCGCCGTGTTCAAGCTCCGgtgagcgaccgcc
cgtccgccctccctctctttctccctcccgccctccctccttccctccct
cccgccctccctccttccctccctcttcctcgtgctccacccaccaagcg
cgtccaccctcttcctcaccctccctccctccctccctcctcagAGGCAT
GATCATGTTCTGCCATATGTACTTCGCCGTCTGCTCGTCTGTGGCCGCCC
TCATGGCCATTTATTTGCGCGAAGACCCGCTGCGgtatggaagggaggga
ggaagggagggagggagggaggagtggtggtggtctcctttagtcactcg
tcttacccgtgtcctatcccgtccttcctcccttccttcctccctccctc
cctccctttccctcagGCTCTTCCACGAGTCCAACGCGGGCACGTACGTG
TGGACTCAGCTCATTCTCGGCGTGGTGTTTCTCGCTTACTTTGCCCTCCA
ATGCCTTGCGCTCTTCCACAGCAACACCCTTGACCTCTGgcacgtccctt
tccctccctccctccctccctccttccctccctccctccctccttccctc
cctccctccctccttccctccctccctcctttcatgccattctctttcgt
acctctcctctcatccctcctctctccctccctccctccctccctccctc
cctccctacctctctacctccccagGATATCGCGAGTGGTGCAGCTGTTG
GCTGTAACGGTCATTGGCGGCCTTTATTACGCGACCGTCTTCACGCCCGg
tacgccctccctccctccctccctacctacctccctccctccctccctcc
ttccctcggtgacttgcatttccttcccatcccctcatcccctcatccct
cttttcctccctccctccctccctccctccctccctccctccctcccccc
agCCATGTTCGATCACCCTCCAATGCTCATGTCCTTCCACGGCCTCCTCG
TATTTTACGGTATTCCTGCCTTCATCTTCGGCATCATGCTCGTCATCGAA
AAAGCGCAAGCCGAGGAACTGCTGATGCTCGgtacgtccccaccctccct
ccctccctccctccctccctccctccctccctccctccctccttgaagcg
tgaccaagctgtcagcgttctccctctcaatcttcatctcacccccctcc
ctccctccctccctccctgcagCCAACAAGAACAAGAATAAGAGCAAGGA
GTACGGCCAGAAAGAGGAGATGGAAATTCTTCTCACGTCCAACGAGGACA
ACAAGgtacgccctccctccctccctccctccctccctccctccctccct
ccctccctccttccctccctccttccctccctccctccctccctccctcc
ctccccctttcaaatgctgtccaagagcaagaaagacgtcatccctctct
tcctctccctccttccctacctcgctccctccctcagATGCTGTCCAAGA
GCAAGAGAGATATTATTTCTCTCAACGATCCGATCTTCGACAAGGAGGAG
GACGAGGACGAACGCCTCACCTCCTCCGCCAGCCATgtgagtccctccct
ctcatcatccctcccttcctcttttgtttctcgtcgttcctcccctcccc
ctctctctcccacatccctctccccttctcctgggctctgacgccgttcc
tccctccctccttccctccctccctccccatcacagTCTGGAGTGTTCTC
CCTCTTCTCCAAGGCCGTCAGCGCCGCCGGAAATATGGCTTCGGTCACTG
ACGTGGAGTCAGGGGGGAAGGACGCATAATTGAATGAGAAAGGCTGTGGG
TAGGATGGGAGGAAGGGGGGTGATGAGGGTGTCAGATGGATATGGCAGGC
TCGGCGAGTCGTTTAAGAATGATGGGTGTGAACAAGGAAGGAAGGAAGGA
AGGGAAGGAGGGAGAAAGGGAGGGAGGGAGGGAGGGATAATAGTAGTGAA
AGCCTCAACCCCCCAGCCTGGAGAAGACAAGCAGAAAAAATTAGCACAAA
GGGCGAGGAGGGGATGCGACGATGAAAGGAGGGAGGGTGGTAAGAAGGGA
AGGAAAAAGACATGTGAGGTGTTGGTAAAAGACTGATCCTCTCCTTGCTT
GCTCCCTGATTCTTCCCTTCCTTCCCTCCTCCTCCCGCTTCTTCGTCCTC
TTCCTCCTTCTTGGGAATCTGAAGAGGAGGAGGAGGAGGAGAAGGAGGAG
GACGAGGAGGAGGAGGGAAAAATCAAGATGAGTCCCAATTTTATGCTTGA
CGTCATTCCTACTTTATTTCCACGATTGTTATTATCAAGAGATGGAGGGA
GAGGAAGGAGAATTAGAAGAAGAAGAAGAAGAAGTGACAGAAGAAGAAGA
AGAATGAAAAAAAGAAGGAGAAGAAGAGGAAAAAAATGGAGAAATATGAA
AGAGCAGCCAACCCTCTTCATTCATTTTATTACTTTACTCCTGCACTCGT
CTATTTATTCCTTGTTTATCTATTTCCTCCTGTACTCGTCTATTCATTCT
CCCCACCCCTTAAATTTACTCATGTCCTCGTCTATTGATCTACGCATTCA
TTTATTGGTTGATTGATTGGTTGATTTATTGGCGTCTCTAAAGCGCCTCG
TCACTTCTCCGCTAAGTCGAGCTTAGTGTCAGCATAAGCTTAGGAGTAAG
CATAAGAATGAGTAGAGGTATAGGTGTAAGTATGACCATAAATGTTATGC
AATACTTTATGAACTAATAATTTTACAGCCCATTCTCCTTCATCCCTTCT
TGTCACTCCTTTCTCAGGAAATCAGAGCGGAAGATGCTTACTTCCCGCAA
TG back to topprotein sequence of NO27G00270.4 >NO27G00270.4-protein ID=NO27G00270.4-protein|Name=NO27G00270.4|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp
MTSPTSTSTLCRRQRRRSILRPSSTFFFLLLAVFLLLLPVVVRAEGEAAP
APATDAAAVAPPAPAVDEAAKKAAEEEAAKKAADEEAAKKKAEEEAAAKK
VADEEEAKKKAEEEAKKKMEESAAAVVSTESASVMVAELEKALKADKEKL
IGELEALKKTMAEKEAKIKELEEAKTKAEGERDGKGREVEEKKALLDTSN
KELGEARTKITALMIVQEDLMKQKENLHMTYQELRDKYENPEFQHYVTKR
AEIFYNNNPGLQGAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAP
LLGDHHSHWISGFISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYF
AVCSSVAALMAIYLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCL
ALFHSNTLDLWISRVVQLLAVTVIGGLYYATVFTPAMFDHPPMLMSFHGL
LVFYGIPAFIFGIMLVIEKAQAEELLMLANKNKNKSKEYGQKEEMEILLT
SNEDNKMLSKSKRDIISLNDPIFDKEEDEDERLTSSASHSGVFSLFSKAV
SAAGNMASVTDVESGGKDA* back to topprotein sequence of NO27G00270.3 >NO27G00270.3-protein ID=NO27G00270.3-protein|Name=NO27G00270.3|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp
MTSPTSTSTLCRRQRRRSILRPSSTFFFLLLAVFLLLLPVVVRAEGEAAP
APATDAAAVAPPAPAVDEAAKKAAEEEAAKKAADEEAAKKKAEEEAAAKK
VADEEEAKKKAEEEAKKKMEESAAAVVSTESASVMVAELEKALKADKEKL
IGELEALKKTMAEKEAKIKELEEAKTKAEGERDGKGREVEEKKALLDTSN
KELGEARTKITALMIVQEDLMKQKENLHMTYQELRDKYENPEFQHYVTKR
AEIFYNNNPGLQGAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAP
LLGDHHSHWISGFISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYF
AVCSSVAALMAIYLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCL
ALFHSNTLDLWISRVVQLLAVTVIGGLYYATVFTPAMFDHPPMLMSFHGL
LVFYGIPAFIFGIMLVIEKAQAEELLMLANKNKNKSKEYGQKEEMEILLT
SNEDNKMLSKSKRDIISLNDPIFDKEEDEDERLTSSASHSGVFSLFSKAV
SAAGNMASVTDVESGGKDA* back to topprotein sequence of NO27G00270.2 >NO27G00270.2-protein ID=NO27G00270.2-protein|Name=NO27G00270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=608bp
MTSPTSTSTLCRRQRRRSILRPSSTFFFLLLAVFLLLLPVVVRAEGEAAP
APATDAAAVAPPAPAVDEAAKKAAEEEAAKKAADEEAAKKKAEEEEAAKK
AADEEAAKKKAEEEEAAKKAADEEAAKKKAEEEAAAKKVADEEEAKKKAE
EEAKKKMEESAAAVVSTESASVMVAELEKALKADKEKLIGELEALKKTMA
EKEAKIKELEEAKTKAEGERDGKGREVEEKKALLDTSNKELGEARTKITA
LMIVQEDLMKQKENLHMTYQELRDKYENPEFQHYVTKRAEIFYNNNPGLQ
GAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAPLLGDHHSHWISG
FISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYFAVCSSVAALMAI
YLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCLALFHSNTLDLWI
SRVVQLLAVTVIGGLYYATVFTPAMFDHPPMLMSFHGLLVFYGIPAFIFG
IMLVIEKAQAEELLMLANKNKNKSKEYGQKEEMEILLTSNEDNKMLSKSK
RDIISLNDPIFDKEEDEDERLTSSASHSGVFSLFSKAVSAAGNMASVTDV
ESGGKDA* back to topprotein sequence of NO27G00270.1 >NO27G00270.1-protein ID=NO27G00270.1-protein|Name=NO27G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=589bp
MTSPTSTSTLCRRQRRRSILRPSSTFFFLLLAVFLLLLPVVVRAEGEAAP
APATDAAAVAPPAPAVDEAAKKAAEEEAAKKAADEEAAKKKAEEEEAAKK
AADEEAAKKKAEEEAAAKKVADEEEAKKKAEEEAKKKMEESAAAVVSTES
ASVMVAELEKALKADKEKLIGELEALKKTMAEKEAKIKELEEAKTKAEGE
RDGKGREVEEKKALLDTSNKELGEARTKITALMIVQEDLMKQKENLHMTY
QELRDKYENPEFQHYVTKRAEIFYNNNPGLQGAVNKTSELLMPHFEAGSN
QYAIMFNNTHSTLKSNLAPLLGDHHSHWISGFISYGLFLVPLFLSVHSLI
SIRAVFKLRGMIMFCHMYFAVCSSVAALMAIYLREDPLRLFHESNAGTYV
WTQLILGVVFLAYFALQCLALFHSNTLDLWISRVVQLLAVTVIGGLYYAT
VFTPAMFDHPPMLMSFHGLLVFYGIPAFIFGIMLVIEKAQAEELLMLANK
NKNKSKEYGQKEEMEILLTSNEDNKMLSKSKRDIISLNDPIFDKEEDEDE
RLTSSASHSGVFSLFSKAVSAAGNMASVTDVESGGKDA* back to top
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