NO27G00270.1, NO27G00270.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00270.1
Unique Name	NO27G00270.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2790
Alignment location	chr27:92119..98038 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:92119..98038 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G00270.1 vs.
Match: XP_024383531.1 (trichohyalin-like [Physcomitrella patens]; XP_024383532.1 trichohyalin-like [Physcomitrella patens]; PNR49830.1 hypothetical protein PHYPA_011726 [Physcomitrella patens])

HSP 1 Score: 76.6 bits (187), Expect = 2.800e-10
Identity = 56/192 (29.17%), Postives = 92/192 (47.92%), Query Frame = 0

Query:  267 TKRAEIFYNNNPGLQGAVNKTSELLMPHFEAGSNQYAIMFNNTHSTLKSNLAPLLGDHHSHWISGFISYGLFLVPLFLSVHSLISIRAVFKLRGMIMFCHMYFAVCSSVAALMAIYLREDPLRLFHESNAGTYVWTQLILGVVFLAYFALQCLAL---FHSNTLDLWISRVVQLLAVTVIGGLYYATVFTPA 456
            T+ +E+F + +   QGA     + L+      S Q    F   +  L S + P LG+ H+  ++  ISY L L+PL L       +R    L+  I+F ++Y AV   +  + A+ L  +P+ +FHE +  +Y+  QL+    ++ Y  LQ   L   +   T     +  VQ++  +VIG  YY TVF  A
Sbjct:  645 TQSSEMFQSKH---QGASKDDPDHLVKKINVFSVQTKTHFVKVNQDLASTITPFLGNRHAPAVASVISYCLLLLPLALIFFVCEQVREFLTLQKAILFANIYLAVHFELLLVAALGLGSEPMEIFHEFSTSSYLVLQLVQAFGYILYLTLQTADLTLAYAEGTAIAKSTSTVQIVVASVIGVHYYITVFLKA 833

The following BLAST results are available for this feature:

BLAST of NO27G00270.1 vs.

BLAST of NO27G00270.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_024383531.1	2.800e-10	29.17	trichohyalin-like [Physcomitrella patens]; XP_0243...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00270	NO27G00270	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00270.1	NO27G00270.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00270.1.cds1	NO27G00270.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds2	NO27G00270.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds3	NO27G00270.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds4	NO27G00270.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds5	NO27G00270.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds6	NO27G00270.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds7	NO27G00270.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds8	NO27G00270.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds9	NO27G00270.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds10	NO27G00270.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds11	NO27G00270.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds12	NO27G00270.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds13	NO27G00270.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds14	NO27G00270.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds15	NO27G00270.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds16	NO27G00270.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds17	NO27G00270.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds18	NO27G00270.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00270.1.cds19	NO27G00270.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:92119..98038-
coding sequence from alignment at chr27:92119..98038-

mRNA sequence

>NO27G00270.1 ID=NO27G00270.1|Name=NO27G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=2790bp
ATGACCTCTCCTACCAGCACCTCCACCTTGTGCCGACGGCAGCGCCGTCG
CAGTATCCTGCGGCCGTCGTCGACCTTCTTCTTTCTTCTCCTAGCTGTGT
TTCTCCTCCTCCTTCCTGTGGTGGTGAGGGCCGAAGGGGAAGCTGCGCCT
GCTCCTGCCACTGATGCTGCTGCTGTCGCCCCTCCTGCTCCTGCGGTGGA
CGAAGCGGCGAAGAAAGCCGCTGAGGAGGAGGCAGCCAAGAAGGCAGCCG
ATGAGGAAGCAGCGAAAAAGAAGGCCGAGGAGGAGGAGGCAGCCAAGAAG
GCAGCCGATGAGGAAGCAGCGAAAAAGAAGGCCGAGGAGGAGGCCGCGGC
CAAGAAGGTGGCTGATGAGGAGGAAGCGAAAAAGAAGGCTGAGGAGGAGG
CGAAGAAAAAGATGGAGGAGTCCGCTGCCGCTGTCGTGAGCACGGAGTCG
GCGTCTGTCATGGTTGCCGAGCTCGAGAAGGCTTTGAAAGCCGACAAGGA
GAAACTCATCGGTGAGCTCGAGGCCCTCAAGAAGACGATGGCGGAAAAAG
AGGCTAAGATTAAGGAGCTTGAGGAAGCCAAGACCAAAGCCGAGGGAGAG
CGCGACGGCAAAGGCCGTGAGGTGGAAGAGAAGAAGGCGCTGCTTGATAC
CTCCAACAAAGAGCTCGGAGAAGCCAGGACAAAGATTACGGCGTTGATGA
TCGTGCAGGAGGACCTGATGAAGCAGAAGGAGAACCTTCACATGACCTAC
CAGGAGCTCCGCGACAAGTATGAGAACCCCGAGTTCCAGCATTACGTGAC
CAAACGCGCCGAGATTTTCTACAACAACAACCCCGGCCTGCAGGGAGCCG
TGAACAAGACCAGCGAGCTCCTCATGCCTCACTTCGAAGCCGGCTCCAAC
CAGTACGCCATTATGTTCAACAACACCCACAGCACCCTCAAGTCTAATCT
AGCCCCTCTTCTTGGAGACCATCATTCGCATTGGATCTCCGGATTTATCT
CCTACGGCCTCTTCCTCGTCCCTCTCTTTCTCTCTGTTCACTCCCTCATC
TCCATCCGCGCCGTGTTCAAGCTCCGAGGCATGATCATGTTCTGCCATAT
GTACTTCGCCGTCTGCTCGTCTGTGGCCGCCCTCATGGCCATTTATTTGC
GCGAAGACCCGCTGCGGCTCTTCCACGAGTCCAACGCGGGCACGTACGTG
TGGACTCAGCTCATTCTCGGCGTGGTGTTTCTCGCTTACTTTGCCCTCCA
ATGCCTTGCGCTCTTCCACAGCAACACCCTTGACCTCTGGATATCGCGAG
TGGTGCAGCTGTTGGCTGTAACGGTCATTGGCGGCCTTTATTACGCGACC
GTCTTCACGCCCGCCATGTTCGATCACCCTCCAATGCTCATGTCCTTCCA
CGGCCTCCTCGTATTTTACGGTATTCCTGCCTTCATCTTCGGCATCATGC
TCGTCATCGAAAAAGCGCAAGCCGAGGAACTGCTGATGCTCGCCAACAAG
AACAAGAATAAGAGCAAGGAGTACGGCCAGAAAGAGGAGATGGAAATTCT
TCTCACGTCCAACGAGGACAACAAGATGCTGTCCAAGAGCAAGAGAGATA
TTATTTCTCTCAACGATCCGATCTTCGACAAGGAGGAGGACGAGGACGAA
CGCCTCACCTCCTCCGCCAGCCATTCTGGAGTGTTCTCCCTCTTCTCCAA
GGCCGTCAGCGCCGCCGGAAATATGGCTTCGGTCACTGACGTGGAGTCAG
GGGGGAAGGACGCATAATTGAATGAGAAAGGCTGTGGGTAGGATGGGAGG
AAGGGGGGTGATGAGGGTGTCAGATGGATATGGCAGGCTCGGCGAGTCGT
TTAAGAATGATGGGTGTGAACAAGGAAGGAAGGAAGGAAGGGAAGGAGGG
AGAAAGGGAGGGAGGGAGGGAGGGATAATAGTAGTGAAAGCCTCAACCCC
CCAGCCTGGAGAAGACAAGCAGAAAAAATTAGCACAAAGGGCGAGGAGGG
GATGCGACGATGAAAGGAGGGAGGGTGGTAAGAAGGGAAGGAAAAAGACA
TGTGAGGTGTTGGTAAAAGACTGATCCTCTCCTTGCTTGCTCCCTGATTC
TTCCCTTCCTTCCCTCCTCCTCCCGCTTCTTCGTCCTCTTCCTCCTTCTT
GGGAATCTGAAGAGGAGGAGGAGGAGGAGAAGGAGGAGGACGAGGAGGAG
GAGGGAAAAATCAAGATGAGTCCCAATTTTATGCTTGACGTCATTCCTAC
TTTATTTCCACGATTGTTATTATCAAGAGATGGAGGGAGAGGAAGGAGAA
TTAGAAGAAGAAGAAGAAGAAGTGACAGAAGAAGAAGAAGAATGAAAAAA
AGAAGGAGAAGAAGAGGAAAAAAATGGAGAAATATGAAAGAGCAGCCAAC
CCTCTTCATTCATTTTATTACTTTACTCCTGCACTCGTCTATTTATTCCT
TGTTTATCTATTTCCTCCTGTACTCGTCTATTCATTCTCCCCACCCCTTA
AATTTACTCATGTCCTCGTCTATTGATCTACGCATTCATTTATTGGTTGA
TTGATTGGTTGATTTATTGGCGTCTCTAAAGCGCCTCGTCACTTCTCCGC
TAAGTCGAGCTTAGTGTCAGCATAAGCTTAGGAGTAAGCATAAGAATGAG
TAGAGGTATAGGTGTAAGTATGACCATAAATGTTATGCAATACTTTATGA
ACTAATAATTTTACAGCCCATTCTCCTTCATCCCTTCTTGTCACTCCTTT
CTCAGGAAATCAGAGCGGAAGATGCTTACTTCCCGCAATG

protein sequence of NO27G00270.1

>NO27G00270.1-protein ID=NO27G00270.1-protein|Name=NO27G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=589bp
MTSPTSTSTLCRRQRRRSILRPSSTFFFLLLAVFLLLLPVVVRAEGEAAP
APATDAAAVAPPAPAVDEAAKKAAEEEAAKKAADEEAAKKKAEEEEAAKK
AADEEAAKKKAEEEAAAKKVADEEEAKKKAEEEAKKKMEESAAAVVSTES
ASVMVAELEKALKADKEKLIGELEALKKTMAEKEAKIKELEEAKTKAEGE
RDGKGREVEEKKALLDTSNKELGEARTKITALMIVQEDLMKQKENLHMTY
QELRDKYENPEFQHYVTKRAEIFYNNNPGLQGAVNKTSELLMPHFEAGSN
QYAIMFNNTHSTLKSNLAPLLGDHHSHWISGFISYGLFLVPLFLSVHSLI
SIRAVFKLRGMIMFCHMYFAVCSSVAALMAIYLREDPLRLFHESNAGTYV
WTQLILGVVFLAYFALQCLALFHSNTLDLWISRVVQLLAVTVIGGLYYAT
VFTPAMFDHPPMLMSFHGLLVFYGIPAFIFGIMLVIEKAQAEELLMLANK
NKNKSKEYGQKEEMEILLTSNEDNKMLSKSKRDIISLNDPIFDKEEDEDE
RLTSSASHSGVFSLFSKAVSAAGNMASVTDVESGGKDA*

mRNA from alignment at chr27:92119..98038-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00270.1 ID=NO27G00270.1|Name=NO27G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=5920bp|location=Sequence derived from alignment at chr27:92119..98038- (Nannochloropsis oceanica)
ATGACCTCTCCTACCAGCACCTCCACCTTGTGCCGACGGCAGCGCCGTCG
CAGTATCCTGCGGCCGTCGTCGACCTTCTTCTTTCTTCTCCTAGCTGGTA
GGTAACACCCCCTTTTTGACTTCCACTCGTTTCCCCTTCCTCTCTCCACT
GGTCACAGCATATTCACACACTCACATACAATCTGCGCTCCACAAACAGT
GTTTCTCCTCCTCCTTCCTGTGGTGGTGAGGGCCGAAGGGGAAGCTGCGC
CTGCTCCTGCCACTGATGCTGCTGCTGTCGCCCCTCCTGCTCCTGCGGTG
GACGAAGCGGCGAAGAAAGCCGCTGAGGTAAGACCAAAAGGGAGAGAGAG
CGGGAGAGAGGAGTGCAAGGAAGGGAGATAGGGTGGAAGGGTGACGAAAG
TGAGCAGCTGAACCGGTTCTGTAGCTGCAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGAAGGAGGAGGAGGAGAAAAAGCTACAACTCATTCGCTTCT
GTGATTCTCTTTCTCACAGGAGGAGGCAGCCAAGAAGGCAGCCGATGAGG
AAGCAGCGAAAAAGAAGGCCGAGGAGGTAAGTAGAAGACAGAAAGAGAGA
GGGAGGAAGGGAGGGAAATAGGATGCAATAAAATGATAAAAATGATGCGA
CAGAACCGGCTATTCACCTTTAGCAGCAGTAGCAGAAGGAGGAGGAGGGA
AAGGAGGAGGAGAAAGAGGAGGAGCAGCAGCAGAGCTTATAATTTACATA
TTTCATATTTCTACATTTCTGTCTCCCACAGGAGGAGGCAGCCAAGAAGG
CAGCCGATGAGGAAGCAGCGAAAAAGAAGGCCGAGGAGGTAAGTAGAAGA
CAGAAAGAGAGAGGGAGGAAGGGAGGGAAATAGGATGCAATAAAATGATA
AAAATGATGCGACAGAACCGGCTATTCACCTTTAGCAGCAGTAGCAGAAG
GAGGAGGAGGGAAAGGAGGAGGAGAAAGAGGAGGAGCAGCAGCAGAGCTT
ATAATTTATATATTTCATATTTCTACATTTCTGTCTCCCACAGGAGGAGG
CAGCCAAGAAGGCAGCCGATGAGGAAGCAGCGAAAAAGAAGGCCGAGGAG
GTAAGTAGAAGACAGAAAGAGGGAGGGAGGAAGGGAGAAGGGAGGGAGGG
TGAAATAAGTGTGTTTCCATTTCGCTATGATGAAAATTTAAGGATAACCA
GGCGTAATAAATTACCATTATTGCACGTCTACCTCATCTTCTGACGTTTT
CTCCCTGTGTCTGTTCCGTTTTCTTTTAGGAGGCCGCGGCCAAGAAGGTG
GCTGATGAGGAGGAAGCGAAAAAGAAGGCTGAGGTAGGAAGGGGGAAGGG
AAAAAGGAAGAGCACGAGGGAGGGAAGGAGGGCGGGAAACAACGGCATTC
CTTGACTCATTTGGACGACAGCTTTCGACTTTTGTTTCCAAAAGCGTATA
CCCACATCCTTCCTTCCTCCCCCCCCTTCCCCTTCCTTCAGGAGGAGGCG
AAGAAAAAGATGGAGGAGTCCGCTGCCGCTGTCGTGAGCACGGAGTCGGC
GTCTGTCATGGTTGCCGAGCTCGAGAAGGCTTTGAAAGGTACGTCCTGTC
CTTCCCTCCTTCCCTTCCTCCCTCTCTCCCTCCCTCCCTCTCCCTCTTCC
TCCTTGATCCGATCCTCCCAATCTCCCTCCTTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCCCTCAGCCGACAAGG
AGAAACTCATCGGTGAGCTCGAGGCCCTCAAGAAGACGATGGCGGAAAAA
GAGGCTAAGATTAAGGAGCTTGAGGAAGCCAAGACCAAAGCCGAGGGAGG
TACGTCCCTCTCTCTCTCCCTCCCTTCCTTCTTCCCTTCCTCCCTCCCTC
CCTCCCTTTCTGACACTCTCCCACGTAGCACTCCTCACTCCCTCCCTCCC
TTCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTCAGAGCGCGACGGCAAA
GGCCGTGAGGTGGAAGAGAAGAAGGCGCTGCTTGATACCTCCAACAAAGA
GCTCGGAGAAGCCAGGACAAAGATTACGGCGTTGATGATCGTGCAGGTAG
GTAGGTAGGTAGGGAGGGAGGGAGGGAGAGAGGGAGTGAGGAAGTGAGGA
AGTGAGGGAGGGAGGGAGGGAGAGAGGGAGTGAGGGAGGAAGGGAGGAAG
GGAGAGATGAAAGGAAAGTGAAGTAGAATCTAGAAGAAGACGTCATTTCC
TGGCAAATATAGCATTTGACACACATTTTGAATTTTTCTACTTCCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCTCTGTGGTCCAGGAGGACCTGA
TGAAGCAGAAGGAGAACCTTCACATGACCTACCAGGAGCTCCGCGACAAG
TATGAGGTAGGTTTCCCCCCTCCCTCCCTCCCTCCCTTCCTTCCTCACAC
CCAGCTAACCCGCCATCCACCTCATCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTAGAACCCCGAGTTCCAGCATTACGTGACCAAACGCGCCGA
GATTTTCTACAACAACAACCCCGGCCTGCAGGGAGCCGTGAACAAGGTGC
GTGCCCTCCCTCCCTCCCTCCCTCCCTTGTTGCCTGCCGTACATTCCGTC
CTTCCTTATTCCTTCAAGAAAAAACAAGTCTCCTCGGATCCTTCCGCCAT
CTTCCTCACCCTCCCTCTTTCTCCCTCCCTCCCTCCCTCCCTCTTCCTCC
CCCTTCCTCAGACCAGCGAGCTCCTCATGCCTCACTTCGAAGCCGGCTCC
AACCAGTACGCCATTATGTTCAACAACACCCACAGCACCCTCAAGGTATC
ACCCCCCCATCTATGTGCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCCT
CGTACTCGAGCACCGACCCGTGTTAAGCTTATCATGACCATCTGCTTCCC
CTCCCTCCCTCGCTCCCTCAGTCTAATCTAGCCCCTCTTCTTGGAGACCA
TCATTCGCATTGGATCTCCGGATTTATCTCCTACGGCCTCTTCCTCGTCC
CTCTCTTTCTCTCTGTTCACTCCCTCATCTCCATCCGCGCCGTGTTCAAG
CTCCGGTGAGCGACCGCCCGTCCGCCCTCCCTCTCTTTCTCCCTCCCGCC
CTCCCTCCTTCCCTCCCTCCCGCCCTCCCTCCTTCCCTCCCTCTTCCTCG
TGCTCCACCCACCAAGCGCGTCCACCCTCTTCCTCACCCTCCCTCCCTCC
CTCCCTCCTCAGAGGCATGATCATGTTCTGCCATATGTACTTCGCCGTCT
GCTCGTCTGTGGCCGCCCTCATGGCCATTTATTTGCGCGAAGACCCGCTG
CGGTATGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAGTGGTGGTG
GTCTCCTTTAGTCACTCGTCTTACCCGTGTCCTATCCCGTCCTTCCTCCC
TTCCTTCCTCCCTCCCTCCCTCCCTTTCCCTCAGGCTCTTCCACGAGTCC
AACGCGGGCACGTACGTGTGGACTCAGCTCATTCTCGGCGTGGTGTTTCT
CGCTTACTTTGCCCTCCAATGCCTTGCGCTCTTCCACAGCAACACCCTTG
ACCTCTGGCACGTCCCTTTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCC
TCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTT
CATGCCATTCTCTTTCGTACCTCTCCTCTCATCCCTCCTCTCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTACCTCTCTACCTCCCCAGGATATCG
CGAGTGGTGCAGCTGTTGGCTGTAACGGTCATTGGCGGCCTTTATTACGC
GACCGTCTTCACGCCCGGTACGCCCTCCCTCCCTCCCTCCCTACCTACCT
CCCTCCCTCCCTCCCTCCTTCCCTCGGTGACTTGCATTTCCTTCCCATCC
CCTCATCCCCTCATCCCTCTTTTCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCCCCAGCCATGTTCGATCACCCTCCAATGCTCATGT
CCTTCCACGGCCTCCTCGTATTTTACGGTATTCCTGCCTTCATCTTCGGC
ATCATGCTCGTCATCGAAAAAGCGCAAGCCGAGGAACTGCTGATGCTCGG
TACGTCCCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCTTGAAGCGTGACCAAGCTGTCAGCGTTCTCCCTCTCAATC
TTCATCTCACCCCCCTCCCTCCCTCCCTCCCTCCCTGCAGCCAACAAGAA
CAAGAATAAGAGCAAGGAGTACGGCCAGAAAGAGGAGATGGAAATTCTTC
TCACGTCCAACGAGGACAACAAGGTACGCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCCCTTTCAAATGCTGTCCAAGAGCAAGA
AAGACGTCATCCCTCTCTTCCTCTCCCTCCTTCCCTACCTCGCTCCCTCC
CTCAGATGCTGTCCAAGAGCAAGAGAGATATTATTTCTCTCAACGATCCG
ATCTTCGACAAGGAGGAGGACGAGGACGAACGCCTCACCTCCTCCGCCAG
CCATGTGAGTCCCTCCCTCTCATCATCCCTCCCTTCCTCTTTTGTTTCTC
GTCGTTCCTCCCCTCCCCCTCTCTCTCCCACATCCCTCTCCCCTTCTCCT
GGGCTCTGACGCCGTTCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCCATC
ACAGTCTGGAGTGTTCTCCCTCTTCTCCAAGGCCGTCAGCGCCGCCGGAA
ATATGGCTTCGGTCACTGACGTGGAGTCAGGGGGGAAGGACGCATAATTG
AATGAGAAAGGCTGTGGGTAGGATGGGAGGAAGGGGGGTGATGAGGGTGT
CAGATGGATATGGCAGGCTCGGCGAGTCGTTTAAGAATGATGGGTGTGAA
CAAGGAAGGAAGGAAGGAAGGGAAGGAGGGAGAAAGGGAGGGAGGGAGGG
AGGGATAATAGTAGTGAAAGCCTCAACCCCCCAGCCTGGAGAAGACAAGC
AGAAAAAATTAGCACAAAGGGCGAGGAGGGGATGCGACGATGAAAGGAGG
GAGGGTGGTAAGAAGGGAAGGAAAAAGACATGTGAGGTGTTGGTAAAAGA
CTGATCCTCTCCTTGCTTGCTCCCTGATTCTTCCCTTCCTTCCCTCCTCC
TCCCGCTTCTTCGTCCTCTTCCTCCTTCTTGGGAATCTGAAGAGGAGGAG
GAGGAGGAGAAGGAGGAGGACGAGGAGGAGGAGGGAAAAATCAAGATGAG
TCCCAATTTTATGCTTGACGTCATTCCTACTTTATTTCCACGATTGTTAT
TATCAAGAGATGGAGGGAGAGGAAGGAGAATTAGAAGAAGAAGAAGAAGA
AGTGACAGAAGAAGAAGAAGAATGAAAAAAAGAAGGAGAAGAAGAGGAAA
AAAATGGAGAAATATGAAAGAGCAGCCAACCCTCTTCATTCATTTTATTA
CTTTACTCCTGCACTCGTCTATTTATTCCTTGTTTATCTATTTCCTCCTG
TACTCGTCTATTCATTCTCCCCACCCCTTAAATTTACTCATGTCCTCGTC
TATTGATCTACGCATTCATTTATTGGTTGATTGATTGGTTGATTTATTGG
CGTCTCTAAAGCGCCTCGTCACTTCTCCGCTAAGTCGAGCTTAGTGTCAG
CATAAGCTTAGGAGTAAGCATAAGAATGAGTAGAGGTATAGGTGTAAGTA
TGACCATAAATGTTATGCAATACTTTATGAACTAATAATTTTACAGCCCA
TTCTCCTTCATCCCTTCTTGTCACTCCTTTCTCAGGAAATCAGAGCGGAA
GATGCTTACTTCCCGCAATG

Coding sequence (CDS) from alignment at chr27:92119..98038-

>NO27G00270.1 ID=NO27G00270.1|Name=NO27G00270.1|organism=Nannochloropsis oceanica|type=CDS|length=1767bp|location=Sequence derived from alignment at chr27:92119..98038- (Nannochloropsis oceanica)
ATGACCTCTCCTACCAGCACCTCCACCTTGTGCCGACGGCAGCGCCGTCG
CAGTATCCTGCGGCCGTCGTCGACCTTCTTCTTTCTTCTCCTAGCTGTGT
TTCTCCTCCTCCTTCCTGTGGTGGTGAGGGCCGAAGGGGAAGCTGCGCCT
GCTCCTGCCACTGATGCTGCTGCTGTCGCCCCTCCTGCTCCTGCGGTGGA
CGAAGCGGCGAAGAAAGCCGCTGAGGAGGAGGCAGCCAAGAAGGCAGCCG
ATGAGGAAGCAGCGAAAAAGAAGGCCGAGGAGGAGGAGGCAGCCAAGAAG
GCAGCCGATGAGGAAGCAGCGAAAAAGAAGGCCGAGGAGGAGGCCGCGGC
CAAGAAGGTGGCTGATGAGGAGGAAGCGAAAAAGAAGGCTGAGGAGGAGG
CGAAGAAAAAGATGGAGGAGTCCGCTGCCGCTGTCGTGAGCACGGAGTCG
GCGTCTGTCATGGTTGCCGAGCTCGAGAAGGCTTTGAAAGCCGACAAGGA
GAAACTCATCGGTGAGCTCGAGGCCCTCAAGAAGACGATGGCGGAAAAAG
AGGCTAAGATTAAGGAGCTTGAGGAAGCCAAGACCAAAGCCGAGGGAGAG
CGCGACGGCAAAGGCCGTGAGGTGGAAGAGAAGAAGGCGCTGCTTGATAC
CTCCAACAAAGAGCTCGGAGAAGCCAGGACAAAGATTACGGCGTTGATGA
TCGTGCAGGAGGACCTGATGAAGCAGAAGGAGAACCTTCACATGACCTAC
CAGGAGCTCCGCGACAAGTATGAGAACCCCGAGTTCCAGCATTACGTGAC
CAAACGCGCCGAGATTTTCTACAACAACAACCCCGGCCTGCAGGGAGCCG
TGAACAAGACCAGCGAGCTCCTCATGCCTCACTTCGAAGCCGGCTCCAAC
CAGTACGCCATTATGTTCAACAACACCCACAGCACCCTCAAGTCTAATCT
AGCCCCTCTTCTTGGAGACCATCATTCGCATTGGATCTCCGGATTTATCT
CCTACGGCCTCTTCCTCGTCCCTCTCTTTCTCTCTGTTCACTCCCTCATC
TCCATCCGCGCCGTGTTCAAGCTCCGAGGCATGATCATGTTCTGCCATAT
GTACTTCGCCGTCTGCTCGTCTGTGGCCGCCCTCATGGCCATTTATTTGC
GCGAAGACCCGCTGCGGCTCTTCCACGAGTCCAACGCGGGCACGTACGTG
TGGACTCAGCTCATTCTCGGCGTGGTGTTTCTCGCTTACTTTGCCCTCCA
ATGCCTTGCGCTCTTCCACAGCAACACCCTTGACCTCTGGATATCGCGAG
TGGTGCAGCTGTTGGCTGTAACGGTCATTGGCGGCCTTTATTACGCGACC
GTCTTCACGCCCGCCATGTTCGATCACCCTCCAATGCTCATGTCCTTCCA
CGGCCTCCTCGTATTTTACGGTATTCCTGCCTTCATCTTCGGCATCATGC
TCGTCATCGAAAAAGCGCAAGCCGAGGAACTGCTGATGCTCGCCAACAAG
AACAAGAATAAGAGCAAGGAGTACGGCCAGAAAGAGGAGATGGAAATTCT
TCTCACGTCCAACGAGGACAACAAGATGCTGTCCAAGAGCAAGAGAGATA
TTATTTCTCTCAACGATCCGATCTTCGACAAGGAGGAGGACGAGGACGAA
CGCCTCACCTCCTCCGCCAGCCATTCTGGAGTGTTCTCCCTCTTCTCCAA
GGCCGTCAGCGCCGCCGGAAATATGGCTTCGGTCACTGACGTGGAGTCAG
GGGGGAAGGACGCATAA

Synonyms

Publications