NO25G00920, NO25G00920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00920 vs. NCBI_GenBank
Match: EWM21625.1 (Poly A polymerase regulatory subunit [Nannochloropsis gaditana]) HSP 1 Score: 485.0 bits (1247), Expect = 2.500e-133 Identity = 252/408 (61.76%), Postives = 295/408 (72.30%), Query Frame = 0 Query: 26 TWVEDEKSWNEYQGVSVVERMENIKTTLKEGLARAQAEADAQGAGESSNIANVSESNVMIETVQALQEILPADLRVSLPWSALVNLINTGLARVGWSFLGPSQSNRKEGEKEGEKIVTAANSKNEAGVTLSTAAAAAIAPSAADRLAALTEALQGVMHWLPDAALDHTATPTVDPSTLGPEKSWAEYQAMWPVTYPSQPVLTVLSPSFPRRPYKARDDN--LNPKKEGEGGREEGPFPCIRDPHWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFRIRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRTYASEDLILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLVVRG-REGG 431 TW+EDEKSW++YQG+SV++RM+ IK+ LKEG+++++ EA A VM T++ LQE+LPADLR SLPWSALVNLINTGLA+VGWS G +S E K G+ D AALTEALQGV HWLPDAAL+HTATPT + GP KSW +Y+AMWPV YP + +L VLSP+FPRRPY++R D P RDPHWGQRKLFLNELELLT+Y E+GD+V+YAGAAPG H+E LS+ FP + FVLVDPAPFRI SERVKLVAGLMTDALAREY+GR N+IFISDIRRTYASEDLILEDM +Q+RWHE+M PKVSM+KFRLPWRAGETEYL+GEVWTQPYAKARSTETRLVV G R+GG Sbjct: 21 TWIEDEKSWSDYQGLSVLKRMDMIKSVLKEGISQSRDEATA-------------GDYVMGNTMKYLQEVLPADLRTSLPWSALVNLINTGLAKVGWSITGAHESEAPERGKTGK-----------------------------DCEAALTEALQGVTHWLPDAALNHTATPTTTQTVHGPVKSWQDYRAMWPVHYPDEDILRVLSPTFPRRPYRSRQDEEXXXXXXXXXXXXXASPPSMTRDPHWGQRKLFLNELELLTRYAEEGDLVLYAGAAPGWHLELLSRRFFPGVAFVLVDPAPFRIEASERVKLVAGLMTDALAREYAGRENLIFISDIRRTYASEDLILEDMREQERWHEMMGPKVSMMKFRLPWRAGETEYLDGEVWTQPYAKARSTETRLVVEGPRKGG 386
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_004364062.1 (hypothetical protein CAOG_03223 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 161.0 bits (406), Expect = 8.200e-36 Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 0 Query: 267 HWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFRIRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRT-------YASEDLILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLV 424 HWGQRKL L+E+E LT +G G +VVYAGAAPG H+E+LS LFP L F VDPAPF +E++ +KL+ GL TD +A Y G+ +FISDIR E + DM Q RWH LM P SMLKFRLPW G TEYL+G+++ + +TE RL+ Sbjct: 106 HWGQRKLLLSEIEFLTLHGVPGQLVVYAGAAPGTHLEYLS-SLFPELYFHAVDPAPFTAKETDHIKLIQGLFTDEMASSYCGQ-RALFISDIRSADWQRQSDQEVEASVKWDMDAQMRWHLLMQPVRSMLKFRLPWAPGTTEYLDGDLYLPVWGPITTTEARLI 267
BLAST of NO25G00920 vs. NCBI_GenBank
Match: KJE92211.1 (hypothetical protein CAOG_003223 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 161.0 bits (406), Expect = 8.200e-36 Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 0 Query: 267 HWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFRIRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRT-------YASEDLILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLV 424 HWGQRKL L+E+E LT +G G +VVYAGAAPG H+E+LS LFP L F VDPAPF +E++ +KL+ GL TD +A Y G+ +FISDIR E + DM Q RWH LM P SMLKFRLPW G TEYL+G+++ + +TE RL+ Sbjct: 164 HWGQRKLLLSEIEFLTLHGVPGQLVVYAGAAPGTHLEYLS-SLFPELYFHAVDPAPFTAKETDHIKLIQGLFTDEMASSYCGQ-RALFISDIRSADWQRQSDQEVEASVKWDMDAQMRWHLLMQPVRSMLKFRLPWAPGTTEYLDGDLYLPVWGPITTTEARLI 325
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_013756763.1 (hypothetical protein AMSG_06709 [Thecamonas trahens ATCC 50062] >KNC50807.1 hypothetical protein AMSG_06709 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 156.0 bits (393), Expect = 2.700e-34 Identity = 97/258 (37.60%), Postives = 134/258 (51.94%), Query Frame = 0 Query: 177 ALQGVMHWLPDAALDHTATPTVDPSTLGPEKSWAEYQAMWPVTYPSQPVLTVLSPSFPRRPYKARDDNLNPKKEGEGGREEG-PFPCIRDPHWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPF--RIRESERVKLVAGLMTDALAREYSGRNNVIFISDIR----RTYASEDL---ILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLVV 425 A Q + DAA + P DP + + A W Y + + + P R ++ D L P E R + + HWGQRKL ++E+E LT Y GDVVVYAGAAPG H L+ + FP L F L DPA F + + R+ + TD + Y+GR+NV+F+SDIR + E++ + ED L QQ WH+ + P+ SMLKFRLPW AG T+YL+G + + +TETRLVV Sbjct: 9 AYQSAESFEGDAARLGLSVPPADPHAPLTYVTASARAAGWASNYHLRQGKEMYARRMPMRGLESLDRILAPDAPREAYRRRNKSYKTVN--HWGQRKLLMSEVEFLTLYARPGDVVVYAGAAPGAHTAWLADQ-FPALSFELYDPADFVPGLGDHPRIGVHQEFFTDEICATYAGRDNVLFVSDIRTADWKVMGEEEVEKSVYEDQLRQQGWHDAIRPRYSMLKFRLPWGAGSTQYLDGAIHLPVWGPITTTETRLVV 263
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_004364306.1 (hypothetical protein CAOG_01438 [Capsaspora owczarzaki ATCC 30864] >KJE90063.1 hypothetical protein CAOG_001438 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 152.5 bits (384), Expect = 2.900e-33 Identity = 76/158 (48.10%), Postives = 106/158 (67.09%), Query Frame = 0 Query: 267 HWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFRIRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRTYAS-EDLILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLV 424 HWG+RK+ ++E+E L+ YG +VVYAGAAPG H+++L+ FP L+FV VDPAPF+I+++E++ ++ LA+E+ G+ V+FISDIR E DM Q RWHE+M P SMLKFRLPW G+T YL+GEV+ + +TE RLV Sbjct: 206 HWGERKMLMSEIEFLSLYGTPDRLVVYAGAAPGGHMQYLA-SFFPHLKFVGVDPAPFKIKQTEQISFRQQYFSNELAQEFLGK-GVLFISDIRSPDDEIEAQAQADMAAQMRWHEIMQPHRSMLKFRLPWNEGQTMYLDGEVYLPVWGPITTTEARLV 361
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_004998552.1 (hypothetical protein PTSG_01078 [Salpingoeca rosetta] >EGD76377.1 hypothetical protein PTSG_01078 [Salpingoeca rosetta]) HSP 1 Score: 148.7 bits (374), Expect = 4.200e-32 Identity = 88/222 (39.64%), Postives = 122/222 (54.95%), Query Frame = 0 Query: 218 VTYPSQPVLTVLSPSFPRRPYKARDDNLNPKKEGEGGREEGPFPCIRDPHWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFR--IRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRTYASEDLILE---------DMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLVVRGRE 429 V++ P + L+ PR PY+ R R E HWGQRKL L+E+E L ++G VVYAGAAPG HI L++ +FP RFV VDP+PF ++ +++ L TD LA E+ G NV+FISDIR DL+ + D Q RWH++M P SMLKFRL W+ G+TEYL+G+++ + +TE RL+V G + Sbjct: 163 VSHTDLPFVRTLTDESPRMPYRRR-------------RHETKTVI----HWGQRKLLLSEVEFLVRFGHLSKKVVYAGAAPGTHIVQLAR-MFPDHRFVCVDPSPFNDSLKACKQLLLRQEPFTDDLAHEFEG-ENVLFISDIRS--VDPDLVTDKETDKAVGGDQAAQMRWHDIMRPVASMLKFRLSWKPGKTEYLDGDIYLPVWGPITTTEARLMVTGHD 363
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_004995547.1 (hypothetical protein PTSG_03814 [Salpingoeca rosetta] >EGD83183.1 hypothetical protein PTSG_03814 [Salpingoeca rosetta]) HSP 1 Score: 148.3 bits (373), Expect = 5.500e-32 Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 0 Query: 267 HWGQRKLFLNELELLTKY----GEDGDV--VVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFRIRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRTYA------SEDLILEDMLDQQRWHELMNPKVSMLKFRLPW-----RAGETEYLEGEVWTQPYAKARSTETRLVVRGRE 429 HWGQRKL ++E+E LT+ G+ G V VVYAGAAPG HIE LS+ELFPTLR+VLVDPAPF R ++ + + TD LA + + V+FI D+R A E+ + DML QQ+W +LM P +MLKFRLP+ T YL+G+V+ + +TETRLVV E Sbjct: 577 HWGQRKLLMSEIEFLTRVVSAAGDGGRVKTVVYAGAAPGDHIEFLSRELFPTLRWVLVDPAPFVCRPADNIIIKQDYFTDDLACALADEDGVVFICDVRSMDAGMNDQQKENRVAADMLWQQQWVKLMKPMAAMLKFRLPYATRSDTTSSTTYLDGDVYLPCWGGRTTTETRLVVTDPE 755
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_002674895.1 (predicted protein [Naegleria gruberi] >EFC42151.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 146.0 bits (367), Expect = 2.700e-31 Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 0 Query: 267 HWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFR--IRESERVKLVAGLMTDALA------REYSGRNNVIFISDIRRT-------YASEDLILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLVVR 426 HWGQRKL L+E+E LT+Y DGDVV+YAGAAPG H+ +L++ LFP L+F+LVDP F + V ++ TD +A R NN++FISDIR +E I ED+ Q+ W E++ P+ SMLKFRLP+ G+ +Y G+++ + + +TE RLV++ Sbjct: 23 HWGQRKLLLSEIEFLTEYSHDGDVVIYAGAAPGSHLVYLAEVLFPNLKFMLVDPNKFNKDLYHVRNVTIMESYFTDEIAMEIKKIRNIESGNNLLFISDIRTADPLVMDPEQNEKCITEDLTLQKGWLEILLPRFSMLKFRLPFTEGKIKYFRGDIYLPVWGRKWTTECRLVIK 196
BLAST of NO25G00920 vs. NCBI_GenBank
Match: OLP89477.1 (Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase [Symbiodinium microadriaticum]) HSP 1 Score: 146.0 bits (367), Expect = 2.700e-31 Identity = 81/178 (45.51%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 267 HWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPFR------------IRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRT--------YASEDLILEDMLDQQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLVV 425 HWGQRKL L E+E LT+Y E G VVYAGAAPG HI L+K +FP LRFVL+D PF I + R++ TD A+E+ V+FISD+R + Y S+ + +DM Q+RWH LM P S KFRLPW AG T+YL G V + A +TE+RL V Sbjct: 188 HWGQRKLMLAEIEFLTEYYERGSCVVYAGAAPGTHIRLLAK-MFPKLRFVLIDCRPFSDHLNKAAKELLWIDGTPRIRCEQKYFTDETAKEFEHSEGVLFISDVRTSKDADEGDDYPSQKEVEDDMRVQERWHLLMKPVASCFKFRLPWDAGTTKYLNGTVHLPVWGPATTTESRLFV 364
BLAST of NO25G00920 vs. NCBI_GenBank
Match: XP_001746796.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88203.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 141.4 bits (355), Expect = 6.800e-30 Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 0 Query: 224 PVLTVLSPSFPRRPYKARDDNLNPKKEGEGGREEGPFPCIRDPHWGQRKLFLNELELLTKYGEDGDVVVYAGAAPGRHIEHLSKELFPTLRFVLVDPAPF--RIRESERVKLVAGLMTDALAREYSGRNNVIFISDIRRTYASEDLILEDMLD---------QQRWHELMNPKVSMLKFRLPWRAGETEYLEGEVWTQPYAKARSTETRLVVRGRE 429 P T+L P P PY+ R N +K HWGQRKL L E+E L +G+ +VVYAGAAPG H++ L +FP FV VDPAPF ++ E++R+ L + TD +ARE++ R +V+F+SDIR A D++ E +D Q RWH LM K S+LKFRL W+ G T YL+G+++ + +TE RL+V G E Sbjct: 14 PFETILRPDAPAVPYRRRK---NERKS--------------VIHWGQRKLLLCEIEFLLLHGDKAPLVVYAGAAPGPHVKIL-MGMFPKHSFVCVDPAPFSKQLVENDRLILRQEMFTDDVAREFADR-DVLFLSDIRS--ADPDIMDEKEVDSQVVADQEAQMRWHLLMKAKASLLKFRLSWKEGITNYLKGDIYLPIWGPMTTTEARLLVEGTE 208 The following BLAST results are available for this feature:
BLAST of NO25G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00920 ID=NO25G00920|Name=NO25G00920|organism=Nannochloropsis oceanica|type=gene|length=3497bpback to top protein sequence of NO25G00920.3 >NO25G00920.3-protein ID=NO25G00920.3-protein|Name=NO25G00920.3|organism=Nannochloropsis oceanica|type=polypeptide|length=350bpback to top protein sequence of NO25G00920.2 >NO25G00920.2-protein ID=NO25G00920.2-protein|Name=NO25G00920.2|organism=Nannochloropsis oceanica|type=polypeptide|length=431bpback to top protein sequence of NO25G00920.1 >NO25G00920.1-protein ID=NO25G00920.1-protein|Name=NO25G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=350bpback to top Synonyms
Publications
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