NO24G01950, NO24G01950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM28383.1 (expulsion defective family member (exp-2) [Nannochloropsis gaditana] >EWM28385.1 expulsion defective family member (exp-2) [Nannochloropsis gaditana]) HSP 1 Score: 226.5 bits (576), Expect = 2.200e-55 Identity = 136/336 (40.48%), Postives = 193/336 (57.44%), Query Frame = 0 Query: 29 IFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPG-PDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIY-PNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLAKEKEREMERRVE 363 +F+T H +S A M +SC+AFVLST+PRF Y PS C P C P P +EC R+IC+P P+ E VT+ +F +Y+VR+ TV VPQRLIY + + G +PS L KT RYAV +IDL ILP+ L + + + XXX Y DGG L+ TL+ S ++ L+ F +LT ++ ++ ++ E G FKVT +G +FR + G +EVSPFTS+PV+ YWVI+TATTVG+GD +PTS GRFVA +AY GIV ++LP I+ K F Y + D++ E++L +E+E+ R + Sbjct: 33 VFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLN--YVISTMNIMHWRLLRITRVXXXLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGG-EEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKLFPYRTQ 365
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM28384.1 (expulsion defective family member (exp-2) [Nannochloropsis gaditana]) HSP 1 Score: 221.1 bits (562), Expect = 9.200e-54 Identity = 132/319 (41.38%), Postives = 183/319 (57.37%), Query Frame = 0 Query: 29 IFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPG-PDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIY-PNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAE 346 +F+T H +S A M +SC+AFVLST+PRF Y PS C P C P P +EC R+IC+P P+ E VT+ +F +Y+VR+ TV VPQRLIY + + G +PS L KT RYAV +IDL ILP+ L + + + XXX Y DGG L+ TL+ S ++ L+ F +LT ++ ++ ++ E G FKVT +G +FR + G +EVSPFTS+PV+ YWVI+TATTVG+GD +PTS GRFVA +AY GIV ++LP I+ K F Y + D++ E Sbjct: 33 VFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLN--YVISTMNIMHWRLLRITRVXXXLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGG-EEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVE 348
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM24405.1 (potassium voltage-gated channel subfamily d member 2 [Nannochloropsis gaditana]) HSP 1 Score: 218.0 bits (554), Expect = 7.800e-53 Identity = 127/214 (59.35%), Postives = 154/214 (71.96%), Query Frame = 0 Query: 23 NNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFL-RGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILT 236 +N+ R +FLTLHHP FSPLA+ + MG+T+ ++CL FVLST+PRF+ QP C +P C+PGPDS C IC P F VEAVTV IFT++YV+R+ V VP+RLI P +L + G EPS LTKTL + ++WMNIIDL S LPFYL L D GEE F XXXXXXXXXXXXXXYTDG +++RETLRASSAAVGLM FFM +LT Sbjct: 57 SNLRRLVFLTLHHPNFSPLARLLSALMGLTIFITCLGFVLSTMPRFQRQPGHCPDPVCLPGPDSACPESICPPTQIPALFWVEAVTVGIFTIDYVLRLACVHAVPERLINPQHYLHQVGGPRALQEPSGLTKTLSFTIQWMNIIDLLSFLPFYLGLKLDFGEENFVFLRLXXXXXXXXXXXXXXYTDGSTVVRETLRASSAAVGLMAFFMIVLT 270
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM27103.1 (Ion transport [Nannochloropsis gaditana]) HSP 1 Score: 176.0 bits (445), Expect = 3.400e-40 Identity = 104/321 (32.40%), Postives = 173/321 (53.89%), Query Frame = 0 Query: 22 LNNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTF-------LRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIY 336 LN + IF+TL HP S LA + ++F+ ++++ ++F++ TIP P+TC +P C PGP + CT ++C P + +E T+ IFT++Y++R+ V VP L++P + L+ S +P + KT +Y + +NIID+ SI+PFY+ L ++ + + G+++ TLRAS A+ + F T+L ++ S++++ E G + VT E G + R N E SPF SI YW ++ TT+G + YPT+T GR + AY G++ +ALP TIIG++F + Y Sbjct: 53 LNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCK--KTTKYMLSGLNIIDVISIVPFYVYLLAPYPAIRV----FRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQY 367
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_001627987.1 (predicted protein [Nematostella vectensis] >EDO35924.1 predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 114.4 bits (285), Expect = 1.200e-21 Identity = 112/326 (34.36%), Postives = 163/326 (50.00%), Query Frame = 0 Query: 23 NNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPST-CRNPTCIPGPDSECTRIICHPIPYWE-FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQ 347 N R ++ TL +P +S LA+F A+F + +V+S + F + T+P F Q T +N T P + PY E +F + + FT EY++R+ C P++ L++ + +NIIDL SILP+Y+ L D G XXXXXXXXXXXXXXXXX +L TLRAS + ++ FF+ I ++ AS VY+AE G +D SPF SIP + +W ++T TTVG+GD P S G+ V + A G++ IALP +I +F Y + ++ RK EQ Sbjct: 112 NQYLRYVWETLEYPEYSKLAKFLAIFSVVVIVLSLIIFCVETLPEFMPQEVTKPKNATADWKPPKD---------PYEETWFQLNTFVIVWFTAEYILRLI---CSPEK-------------------------LKFLLAALNIIDLLSILPYYVQLALDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXLQILGNTLRASMNELMMLMFFLFIGVMIFASCVYYAEGG--------ID---------------SPFRSIPHSFWWAVVTMTTVGYGDISPESFWGKIVGALCAISGVLTIALPVPVIVSNFENFYNKEINRRKEEQ 377
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_005830634.1 (hypothetical protein GUITHDRAFT_110453 [Guillardia theta CCMP2712] >EKX43654.1 hypothetical protein GUITHDRAFT_110453 [Guillardia theta CCMP2712]) HSP 1 Score: 111.3 bits (277), Expect = 1.000e-20 Identity = 95/340 (27.94%), Postives = 146/340 (42.94%), Query Frame = 0 Query: 29 IFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCV-------PQRLIYPNTFLRGGSTLG---TTEPSRLTKTL---RYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMG------------------QFKVTPESLDGNYFRHNVHGAD--DEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIY 336 ++ TL HP+ S LA + + +T+++SC +F+ TIP C D + H I + V +AIFT++YV+R+ T + P+ Y G + +P LTK L + +R N+IDL SILPFY+ L G + Y+ G LL T+R S +G++ FF++I L +S +YFAE G + P + G F G S F+SI ++ YW + T TT G+GD YP+S G+ + + G + +ALP T+I +F E Y Sbjct: 45 VWNTLEHPSSSRLASVWMIVLIVTIIISCTSFIAETIPSL-----------CCGSTDG-----VWHQI--------DIVCIAIFTIDYVLRVITCPDIYVEYLPAPRLFGYNKAVTPEGDQVSDSTVNKPVWLTKLLARVSFVLRIANMIDLLSILPFYIRLL--AGSRRSGAIQVIKIGRVFRLLRIIKYSSGSELLARTIRTSIEPLGMLIFFVSIAVTLFSSAMYFAERGVWCDEFNNMCGGSAEDGKGWYAIPHTYKGATFSDGCQGHSWCRAKSQFSSIFISGYWCLTTVTTTGYGDMYPSSVGGKVLGFFIMFSGPIILALPITVISTTFAEAY 358
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_020792294.1 (potassium voltage-gated channel subfamily A member 1-like [Boleophthalmus pectinirostris]) HSP 1 Score: 110.5 bits (275), Expect = 1.800e-20 Identity = 106/324 (32.72%), Postives = 164/324 (50.62%), Query Frame = 0 Query: 27 RCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPD--SECTRIICHPIPYWE-FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEK-------LTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLD 341 R +++ +P S A+ A+ M +VVS L F L T+P F ++ T +P PD +E I P+ + FF+VE + + F+ E +VR C P + +R+ MN+IDL +I+P+++T+ +L ++K L XXXXXXXXXXXXXXXXX G +L +TL+AS + L+ FF+ I +L +S VYFAE+ + P +L FTSIP A +W +++ TTVG+GD YP + G+ V + A G++ I+LP +I +F Y R ++ Sbjct: 167 RKLWMLFEYPESSGAARIIAIISVMVIVVSILIFCLETLPEFRHEKELREQHTVVPHPDIANETVTIPPRFTPFQDPFFIVETICICWFSCELLVRFF---CAPSK-------------------------VRFCKDVMNVIDLFAIIPYFVTIGTELAKDKGTQPSVSLALXXXXXXXXXXXXXXXXXXXXGLQILGQTLKASLRELALLIFFLFIGVILFSSAVYFAEVDR----PNTL------------------FTSIPEAFWWAVVSMTTVGYGDMYPETVGGKLVGSMCAIAGVLTISLPVPVIVSNFSYFYHRGME 440
BLAST of NO24G01950 vs. NCBI_GenBank
Match: AFY09703.1 (potassium channel, partial [Nematostella vectensis]) HSP 1 Score: 108.2 bits (269), Expect = 8.700e-20 Identity = 108/315 (34.29%), Postives = 156/315 (49.52%), Query Frame = 0 Query: 23 NNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPST-CRNPTCIPGPDSECTRIICHPIPYWE-FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIY 336 N R ++ TL +P +S LA+F A+F + +V+S + F + T+P F Q T +N T P + PY E +F + + FT EY++R+ C P++ L++ + +NIIDL SILP+Y+ L D G XXXXXXXXXXXXXXXXX +L TLRAS + ++ FF+ I ++ AS VY+AE G +D SPF SIP + +W ++T TTVG+GD P S G+ V + A G++ IALP +I +F Y Sbjct: 156 NQYLRYVWETLEYPEYSKLAKFLAIFSVVVIVLSLIIFCVETLPEFMPQEVTKPKNATADWKPPKD---------PYEETWFQLNTFVIVWFTAEYILRLI---CSPEK-------------------------LKFLLAALNIIDLLSILPYYVQLALDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXLQILGNTLRASMNELMMLMFFLFIGVMIFASCVYYAEGG--------ID---------------SPFRSIPHSFWWAVVTMTTVGYGDISPESFWGKIVGALCAISGVLTIALPVPVIVSNFENFY 410
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_009463163.1 (PREDICTED: potassium voltage-gated channel subfamily A member 7-like, partial [Nipponia nippon]) HSP 1 Score: 106.7 bits (265), Expect = 2.500e-19 Identity = 118/342 (34.50%), Postives = 167/342 (48.83%), Query Frame = 0 Query: 27 RCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYW----EFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEK--------LTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLAKEKERE 357 R +L HP SP A+ AL + ++VS + F L T+P+F + T P P S P P FFVVE + + F++E +VR+ PS+ T R A MN+IDL +I+P+++ L +L ++ L XXXXXXXXXXXXXXXXX++ G +L +TLRAS +GL+ FF+ I +L +S VYFAE A+D + FTSIP A +W ++T TTVG+GD P + G+ V + A G++ I+LP +I +F Y R L R E A E+ERE Sbjct: 106 RQAWLLCEHPESSPAARAVALLSVLVILVSIVVFCLETLPQFR---AGGEGSTQTPPPISTNINASSPPSPRGGLTDPFFVVETICICWFSLELLVRL------------------------LASPSK-TAFFRNA---MNLIDLIAIVPYFVALGTELARQRGVGQPAMSLAIXXXXXXXXXXXXXXXXXHSTGLQILGQTLRASMRELGLLIFFLLIGVVLFSSAVYFAE----------------------AEDAATSFTSIPQAFWWAVVTMTTVGYGDMAPVTVGGKLVGSLCAIAGVLTISLPVPVIVSNFSYFYRREL--RGEEGGEYAHEEERE 392
BLAST of NO24G01950 vs. NCBI_GenBank
Match: ABD59027.1 (voltage-gated potassium channel [Physalia physalis]) HSP 1 Score: 106.7 bits (265), Expect = 2.500e-19 Identity = 110/335 (32.84%), Postives = 163/335 (48.66%), Query Frame = 0 Query: 26 FRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLAKEKEREMERR 361 FR I+ L +P S A+ A +V+S + FV+ T+P F N T + P+ W F V AV +A FT E+++R+ C P + +++ NIIDL SI+P+Y++ XXXXXXXXXXXXXXXXX G +L +TL+AS + ++ FF+ I+ LL S VY+AE + V G + FTSIP A +W I+T TTVG+GD YPT+ LG+ + +A G++ IALP ++ +F Y + + RK E+ + KE E+++E R Sbjct: 162 FRIIWNFLEYPETSRPAKLFAFVSVFIIVISLVMFVMETLPSFAPVVIHLDNGTTLETPNEN---------ESWMFMVSTAV-IAWFTSEFMLRLI---CCPSK-------------------------IKFFTNLSNIIDLLSIVPYYVSFALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQILGDTLKASFHELLMLAFFLLIMILLFGSCVYYAE-----------------YQVEG-----TKFTSIPAASWWAIVTMTTVGYGDMYPTTLLGKLIGFVAVVCGVLTIALPVPVVVSNFEYFYTKERNRRKTEE--VRKEHEKQLEER 434 The following BLAST results are available for this feature:
BLAST of NO24G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01950 ID=NO24G01950|Name=NO24G01950|organism=Nannochloropsis oceanica|type=gene|length=2880bpback to top protein sequence of NO24G01950.1 >NO24G01950.1-protein ID=NO24G01950.1-protein|Name=NO24G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bpback to top Synonyms
Publications
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