NO24G01950, NO24G01950 (gene) Nannochloropsis oceanica

Overview
NameNO24G01950
Unique NameNO24G01950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2880
Alignment locationchr24:511945..514824 +

Link to JBrowse

Properties
Property NameValue
DescriptionPotassium voltage-gated channel subfamily d member 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:511945..514824 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0006813potassium ion transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0008076voltage-gated potassium channel complex
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005249voltage-gated potassium channel activity
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR028325VG_K_chnl
Homology
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM28383.1 (expulsion defective family member (exp-2) [Nannochloropsis gaditana] >EWM28385.1 expulsion defective family member (exp-2) [Nannochloropsis gaditana])

HSP 1 Score: 226.5 bits (576), Expect = 2.200e-55
Identity = 136/336 (40.48%), Postives = 193/336 (57.44%), Query Frame = 0
Query:   29 IFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPG-PDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIY-PNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLAKEKEREMERRVE 363
            +F+T  H  +S  A      M     +SC+AFVLST+PRF Y PS C  P C P  P +EC R+IC+P P+      E VT+ +F  +Y+VR+ TV  VPQRLIY     +    + G  +PS L KT RYAV    +IDL  ILP+ L   + +    +           XXX     Y DGG L+  TL+ S  ++ L+  F  +LT ++ ++ ++ E G FKVT    +G +FR  + G  +EVSPFTS+PV+ YWVI+TATTVG+GD +PTS  GRFVA  +AY GIV ++LP  I+ K F   Y +  D++  E++L  +E+E+    R +
Sbjct:   33 VFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLN--YVISTMNIMHWRLLRITRVXXXLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGG-EEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVEEQLKKEEEEKLFPYRTQ 365          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM28384.1 (expulsion defective family member (exp-2) [Nannochloropsis gaditana])

HSP 1 Score: 221.1 bits (562), Expect = 9.200e-54
Identity = 132/319 (41.38%), Postives = 183/319 (57.37%), Query Frame = 0
Query:   29 IFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPG-PDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIY-PNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAE 346
            +F+T  H  +S  A      M     +SC+AFVLST+PRF Y PS C  P C P  P +EC R+IC+P P+      E VT+ +F  +Y+VR+ TV  VPQRLIY     +    + G  +PS L KT RYAV    +IDL  ILP+ L   + +    +           XXX     Y DGG L+  TL+ S  ++ L+  F  +LT ++ ++ ++ E G FKVT    +G +FR  + G  +EVSPFTS+PV+ YWVI+TATTVG+GD +PTS  GRFVA  +AY GIV ++LP  I+ K F   Y +  D++  E
Sbjct:   33 VFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLN--YVISTMNIMHWRLLRITRVXXXLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGG-EEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDKDADDKAVE 348          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM24405.1 (potassium voltage-gated channel subfamily d member 2 [Nannochloropsis gaditana])

HSP 1 Score: 218.0 bits (554), Expect = 7.800e-53
Identity = 127/214 (59.35%), Postives = 154/214 (71.96%), Query Frame = 0
Query:   23 NNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFL-RGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILT 236
            +N+ R +FLTLHHP FSPLA+  +  MG+T+ ++CL FVLST+PRF+ QP  C +P C+PGPDS C   IC P      F VEAVTV IFT++YV+R+  V  VP+RLI P  +L + G      EPS LTKTL + ++WMNIIDL S LPFYL L  D GEE   F   XXXXXXXXXXXXXXYTDG +++RETLRASSAAVGLM FFM +LT
Sbjct:   57 SNLRRLVFLTLHHPNFSPLARLLSALMGLTIFITCLGFVLSTMPRFQRQPGHCPDPVCLPGPDSACPESICPPTQIPALFWVEAVTVGIFTIDYVLRLACVHAVPERLINPQHYLHQVGGPRALQEPSGLTKTLSFTIQWMNIIDLLSFLPFYLGLKLDFGEENFVFLRLXXXXXXXXXXXXXXYTDGSTVVRETLRASSAAVGLMAFFMIVLT 270          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: EWM27103.1 (Ion transport [Nannochloropsis gaditana])

HSP 1 Score: 176.0 bits (445), Expect = 3.400e-40
Identity = 104/321 (32.40%), Postives = 173/321 (53.89%), Query Frame = 0
Query:   22 LNNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTF-------LRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIY 336
            LN +   IF+TL HP  S LA + ++F+   ++++ ++F++ TIP     P+TC +P C PGP + CT ++C P      + +E  T+ IFT++Y++R+  V  VP  L++P +        L+  S     +P +  KT +Y +  +NIID+ SI+PFY+ L       ++                   + + G+++  TLRAS  A+ +  F  T+L ++  S++++ E G + VT E   G + R N      E SPF SI    YW ++  TT+G  + YPT+T GR  +   AY G++ +ALP TIIG++F + Y
Sbjct:   53 LNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCK--KTTKYMLSGLNIIDVISIVPFYVYLLAPYPAIRV----FRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQY 367          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_001627987.1 (predicted protein [Nematostella vectensis] >EDO35924.1 predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 114.4 bits (285), Expect = 1.200e-21
Identity = 112/326 (34.36%), Postives = 163/326 (50.00%), Query Frame = 0
Query:   23 NNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPST-CRNPTCIPGPDSECTRIICHPIPYWE-FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQ 347
            N   R ++ TL +P +S LA+F A+F  + +V+S + F + T+P F  Q  T  +N T    P  +         PY E +F +    +  FT EY++R+    C P++                         L++ +  +NIIDL SILP+Y+ L  D G      XXXXXXXXXXXXXXXXX      +L  TLRAS   + ++ FF+ I  ++ AS VY+AE G        +D               SPF SIP + +W ++T TTVG+GD  P S  G+ V  + A  G++ IALP  +I  +F   Y + ++ RK EQ
Sbjct:  112 NQYLRYVWETLEYPEYSKLAKFLAIFSVVVIVLSLIIFCVETLPEFMPQEVTKPKNATADWKPPKD---------PYEETWFQLNTFVIVWFTAEYILRLI---CSPEK-------------------------LKFLLAALNIIDLLSILPYYVQLALDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXLQILGNTLRASMNELMMLMFFLFIGVMIFASCVYYAEGG--------ID---------------SPFRSIPHSFWWAVVTMTTVGYGDISPESFWGKIVGALCAISGVLTIALPVPVIVSNFENFYNKEINRRKEEQ 377          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_005830634.1 (hypothetical protein GUITHDRAFT_110453 [Guillardia theta CCMP2712] >EKX43654.1 hypothetical protein GUITHDRAFT_110453 [Guillardia theta CCMP2712])

HSP 1 Score: 111.3 bits (277), Expect = 1.000e-20
Identity = 95/340 (27.94%), Postives = 146/340 (42.94%), Query Frame = 0
Query:   29 IFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCV-------PQRLIYPNTFLRGGSTLG---TTEPSRLTKTL---RYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMG------------------QFKVTPESLDGNYFRHNVHGAD--DEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIY 336
            ++ TL HP+ S LA    + + +T+++SC +F+  TIP             C    D      + H I        + V +AIFT++YV+R+ T   +       P+   Y       G  +      +P  LTK L    + +R  N+IDL SILPFY+ L    G  +                    Y+ G  LL  T+R S   +G++ FF++I   L +S +YFAE G                   +   P +  G  F     G       S F+SI ++ YW + T TT G+GD YP+S  G+ +     + G + +ALP T+I  +F E Y
Sbjct:   45 VWNTLEHPSSSRLASVWMIVLIVTIIISCTSFIAETIPSL-----------CCGSTDG-----VWHQI--------DIVCIAIFTIDYVLRVITCPDIYVEYLPAPRLFGYNKAVTPEGDQVSDSTVNKPVWLTKLLARVSFVLRIANMIDLLSILPFYIRLL--AGSRRSGAIQVIKIGRVFRLLRIIKYSSGSELLARTIRTSIEPLGMLIFFVSIAVTLFSSAMYFAERGVWCDEFNNMCGGSAEDGKGWYAIPHTYKGATFSDGCQGHSWCRAKSQFSSIFISGYWCLTTVTTTGYGDMYPSSVGGKVLGFFIMFSGPIILALPITVISTTFAEAY 358          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_020792294.1 (potassium voltage-gated channel subfamily A member 1-like [Boleophthalmus pectinirostris])

HSP 1 Score: 110.5 bits (275), Expect = 1.800e-20
Identity = 106/324 (32.72%), Postives = 164/324 (50.62%), Query Frame = 0
Query:   27 RCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPD--SECTRIICHPIPYWE-FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEK-------LTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLD 341
            R +++   +P  S  A+  A+   M +VVS L F L T+P F ++       T +P PD  +E   I     P+ + FF+VE + +  F+ E +VR     C P +                         +R+    MN+IDL +I+P+++T+  +L ++K       L  XXXXXXXXXXXXXXXXX   G  +L +TL+AS   + L+ FF+ I  +L +S VYFAE+ +    P +L                  FTSIP A +W +++ TTVG+GD YP +  G+ V  + A  G++ I+LP  +I  +F   Y R ++
Sbjct:  167 RKLWMLFEYPESSGAARIIAIISVMVIVVSILIFCLETLPEFRHEKELREQHTVVPHPDIANETVTIPPRFTPFQDPFFIVETICICWFSCELLVRFF---CAPSK-------------------------VRFCKDVMNVIDLFAIIPYFVTIGTELAKDKGTQPSVSLALXXXXXXXXXXXXXXXXXXXXGLQILGQTLKASLRELALLIFFLFIGVILFSSAVYFAEVDR----PNTL------------------FTSIPEAFWWAVVSMTTVGYGDMYPETVGGKLVGSMCAIAGVLTISLPVPVIVSNFSYFYHRGME 440          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: AFY09703.1 (potassium channel, partial [Nematostella vectensis])

HSP 1 Score: 108.2 bits (269), Expect = 8.700e-20
Identity = 108/315 (34.29%), Postives = 156/315 (49.52%), Query Frame = 0
Query:   23 NNIFRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPST-CRNPTCIPGPDSECTRIICHPIPYWE-FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIY 336
            N   R ++ TL +P +S LA+F A+F  + +V+S + F + T+P F  Q  T  +N T    P  +         PY E +F +    +  FT EY++R+    C P++                         L++ +  +NIIDL SILP+Y+ L  D G      XXXXXXXXXXXXXXXXX      +L  TLRAS   + ++ FF+ I  ++ AS VY+AE G        +D               SPF SIP + +W ++T TTVG+GD  P S  G+ V  + A  G++ IALP  +I  +F   Y
Sbjct:  156 NQYLRYVWETLEYPEYSKLAKFLAIFSVVVIVLSLIIFCVETLPEFMPQEVTKPKNATADWKPPKD---------PYEETWFQLNTFVIVWFTAEYILRLI---CSPEK-------------------------LKFLLAALNIIDLLSILPYYVQLALDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXLQILGNTLRASMNELMMLMFFLFIGVMIFASCVYYAEGG--------ID---------------SPFRSIPHSFWWAVVTMTTVGYGDISPESFWGKIVGALCAISGVLTIALPVPVIVSNFENFY 410          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: XP_009463163.1 (PREDICTED: potassium voltage-gated channel subfamily A member 7-like, partial [Nipponia nippon])

HSP 1 Score: 106.7 bits (265), Expect = 2.500e-19
Identity = 118/342 (34.50%), Postives = 167/342 (48.83%), Query Frame = 0
Query:   27 RCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYW----EFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEK--------LTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLAKEKERE 357
            R  +L   HP  SP A+  AL   + ++VS + F L T+P+F    +     T  P P S        P P       FFVVE + +  F++E +VR+                           PS+ T   R A   MN+IDL +I+P+++ L  +L  ++        L  XXXXXXXXXXXXXXXXX++ G  +L +TLRAS   +GL+ FF+ I  +L +S VYFAE                      A+D  + FTSIP A +W ++T TTVG+GD  P +  G+ V  + A  G++ I+LP  +I  +F   Y R L  R  E    A E+ERE
Sbjct:  106 RQAWLLCEHPESSPAARAVALLSVLVILVSIVVFCLETLPQFR---AGGEGSTQTPPPISTNINASSPPSPRGGLTDPFFVVETICICWFSLELLVRL------------------------LASPSK-TAFFRNA---MNLIDLIAIVPYFVALGTELARQRGVGQPAMSLAIXXXXXXXXXXXXXXXXXHSTGLQILGQTLRASMRELGLLIFFLLIGVVLFSSAVYFAE----------------------AEDAATSFTSIPQAFWWAVVTMTTVGYGDMAPVTVGGKLVGSLCAIAGVLTISLPVPVIVSNFSYFYRREL--RGEEGGEYAHEEERE 392          
BLAST of NO24G01950 vs. NCBI_GenBank
Match: ABD59027.1 (voltage-gated potassium channel [Physalia physalis])

HSP 1 Score: 106.7 bits (265), Expect = 2.500e-19
Identity = 110/335 (32.84%), Postives = 163/335 (48.66%), Query Frame = 0
Query:   26 FRCIFLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFXXXXXXXXXXXXXXXXXYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLAKEKEREMERR 361
            FR I+  L +P  S  A+  A      +V+S + FV+ T+P F        N T +  P+             W F V  AV +A FT E+++R+    C P +                         +++     NIIDL SI+P+Y++            XXXXXXXXXXXXXXXXX   G  +L +TL+AS   + ++ FF+ I+ LL  S VY+AE                 + V G     + FTSIP A +W I+T TTVG+GD YPT+ LG+ +  +A   G++ IALP  ++  +F   Y +  + RK E+  + KE E+++E R
Sbjct:  162 FRIIWNFLEYPETSRPAKLFAFVSVFIIVISLVMFVMETLPSFAPVVIHLDNGTTLETPNEN---------ESWMFMVSTAV-IAWFTSEFMLRLI---CCPSK-------------------------IKFFTNLSNIIDLLSIVPYYVSFALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQILGDTLKASFHELLMLAFFLLIMILLFGSCVYYAE-----------------YQVEG-----TKFTSIPAASWWAIVTMTTVGYGDMYPTTLLGKLIGFVAVVCGVLTIALPVPVVVSNFEYFYTKERNRRKTEE--VRKEHEKQLEER 434          
The following BLAST results are available for this feature:
BLAST of NO24G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28383.12.200e-5540.48expulsion defective family member (exp-2) [Nannoch... [more]
EWM28384.19.200e-5441.38expulsion defective family member (exp-2) [Nannoch... [more]
EWM24405.17.800e-5359.35potassium voltage-gated channel subfamily d member... [more]
EWM27103.13.400e-4032.40Ion transport [Nannochloropsis gaditana][more]
XP_001627987.11.200e-2134.36predicted protein [Nematostella vectensis] >EDO359... [more]
XP_005830634.11.000e-2027.94hypothetical protein GUITHDRAFT_110453 [Guillardia... [more]
XP_020792294.11.800e-2032.72potassium voltage-gated channel subfamily A member... [more]
AFY09703.18.700e-2034.29potassium channel, partial [Nematostella vectensis... [more]
XP_009463163.12.500e-1934.50PREDICTED: potassium voltage-gated channel subfami... [more]
ABD59027.12.500e-1932.84voltage-gated potassium channel [Physalia physalis... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01950.1NO24G01950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598689gene_7419Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100832g2gene6073Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01950.1NO24G01950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01950 ID=NO24G01950|Name=NO24G01950|organism=Nannochloropsis oceanica|type=gene|length=2880bp
ATGCACACAGCAGCTGAGGATGAGGATGAGGACGACGACAACGATGATGA
CATTGATGTTGGGCTGAACAACATTTTCCGGTGCATCTTCCTAACTCTTC
ACCATCCCACTTTCAGTCCACTCGCTCAATTTTGTGCCCTATTTATGGGC
ATGACTGTCGTCGTCTCTTGCCTTGCCTTCGTCCTCTCCACCATACCGCG
GTTTGAGTACCAGCCGTCCACATGTCGCAACCCTACATGTATCCCGGGCC
CAGATTCCGAATGCACGCGCATCATATGCCACCCGATCCCGTATTGGGAG
TTTTTCGTGGTCGAAGCTGTCACGgtaagcacttggaacctccatcttcc
gtaccaacatgttgaagagtaagtgagatcacgaacacttctcactatta
ccttcctccgtttggttagGTCGCAATTTTTACCGTCGAGTATGTGGTAC
GAATGTGCACCGTCCAGTGTGTTCCTCAACGGTTAATTTATCCAAACACG
TTTTTGCGGGGCGGAAGCACGCTTGGTACCACGGAGCCGTCGCGTTTGAC
AAAGACGCTGCGATACGCCGTGCGATGGATGAACATAATTGATTTAGCGT
CGATTTTGCCCTTCTACCTGACGCTGTATTTTGACCTGGGCGAAGAAAAA
CTTACTTTTCTGAGACTTCTGCGCTTGATGgtaagtgtttgaggagtgga
tagagaaaatgtaaggaacttggtggctgaatagcctgctgaactggcgg
atatgtgataccaaaacggtctttgactttgaggctcctgcacgcgatgg
gtcaaggaaggagatggaaaatggggcgtcggctaggcaggcgaatgcaa
gttaggagtttacatttgatcttttctaattgtcgaacttacttatcgcg
cacctcatttctatacctaattctcccgtacgcccctccagCGCGTCATA
AGAATCTTCCGATTGGGACGATACACCGATGGAGGCTCCCTTTTACGAGA
AACCCTCCGGGCAAGCTCGGCGGCTGTGGGTCTGATGTTTTTTTTCATGA
CCATCCTTACTCTGCTCCTAGCCTCAATTGTCTACTTCGCCGAAATGGGA
CAATTCAAGGTCACACCGgtaggtaatttttgcccacccctcacccctcc
ttccttgcgactgtgggcgtggtatttgtttgactcaatcgaattctcaa
acaaatcgtcgtccgattcgtatatctttcagGAGTCCCTGGATGGGAAT
TATTTCCGTCACAATGTGCACGGGGCGGACGATGAGGTTTCGCCCTTTAC
TTCTATCCCGGTGGCTTGCTATTGGGTCATCATGACGGCAACGACCGTGG
GATgtaaggaaagagggatgaattcgggggaatacggcacatataggctt
gtgataaatggtgtctaagccacttctacctcgtgtgtcatagagacatc
cgctgcctcactaacccgcaaatgtcctgacgtgaagttgtcaagaatca
aagaacgtctcttctttctcatggcagttccgatgcggccaacggggaat
atcaatccggcccgtacacttcgatctttggtttgatccttatgataatg
agtaactgcacgattagacttgtcatcaagcgtcttaaaaaaaccttccc
tttgtctatatatgacacacaacatatacagTCGGTGATTTCTACCCAAC
CTCCACGCTCGGTCGCTTTGTGGCCGTCATTGCCGCCTACTTAGGCATTG
TGGGCATTGCTTTGCCCTCGACCATTATCGGCAAAAGTTTCATCGAGATA
TACTTCAGgtaaggagggaggtcggtgaaatctagcatgtagaggacgca
tgacatgttatgaagtaagtcgtcacaccaggtgagggagagtatctacc
tccttcgcctcattccctctgattccatcgaatcaatacagAGTTCTCGA
CGAGCGAAAGGCCGAGCAGCGGTTGTTGGCTAAAGAGAAGGAACGGGAGA
TGGAGAGAAGGGTGGAGGGGGAAGATGTGGGAGGAGGAAGAGGATGTGGG
AATTGTTTTGGATGGGTAACGAAGCAAAGTGGTAACGCGGACGGTCGGAA
TGAGAGAGGGAAAACAGCGCCAAACAGATACACGAGGGCCAAACTTCCAC
GAGAAGAGTCACAACAAGAGGAAGAACAGATGAAAGGAGGAGGAAGAGGA
GGAAGGGAAAGGAGGGCCTGGTCGAATTTATACAAGAACAAAGATAAAAG
TGTGGTGAGAATGATCCACAAAAGAGAACAACAGATGGCCGCGGAAAAAG
CTGAAGAAGAAGCCCTTGTCCACGAAATTGAAGCACAGCTGAAACACACC
ACCATGGAAGAGGTGGAGGAAGCGAGGGAGGCTGGGATGGCGGCGAGGGG
GAAGATGAGGGGTTATTCACCTGCCCCACGTCCTACGTCGGTGCCTAATT
CGGGAGGGAATACGCCCAGTGGCTACATGCTCGCGTCGATTCATCAGGCG
GGCCTTGGTGCAGTGCAAGCGGCAGCGGCATTGCAGGCTATACCGCTGGC
GAGAAAGgtgggattttcaattatatatttatattttattcgatttattc
tattttatttatttattcatgtctatttaatgtaaataaaaaatagGTGC
GAAAACAGCAGCAGCAAATAAAGGATCTGACGGCCGTGGTCCGAGAGCAG
CTCCATCAAATCCAAACTCTCACCGAGACGCTGGGCGAGATGgtatgaag
tgaaaaagatgaaggatagcggggtacatatgaagatgtgccgacactga
ttgagaaattccaccactcacagGAAAGAGCCACTGTGGTGCTCATGGGG
AGATTGGATGAGATCGAAGAACAGGAATAA
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protein sequence of NO24G01950.1

>NO24G01950.1-protein ID=NO24G01950.1-protein|Name=NO24G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bp
MHTAAEDEDEDDDNDDDIDVGLNNIFRCIFLTLHHPTFSPLAQFCALFMG
MTVVVSCLAFVLSTIPRFEYQPSTCRNPTCIPGPDSECTRIICHPIPYWE
FFVVEAVTVAIFTVEYVVRMCTVQCVPQRLIYPNTFLRGGSTLGTTEPSR
LTKTLRYAVRWMNIIDLASILPFYLTLYFDLGEEKLTFLRLLRLMRVIRI
FRLGRYTDGGSLLRETLRASSAAVGLMFFFMTILTLLLASIVYFAEMGQF
KVTPESLDGNYFRHNVHGADDEVSPFTSIPVACYWVIMTATTVGFGDFYP
TSTLGRFVAVIAAYLGIVGIALPSTIIGKSFIEIYFRVLDERKAEQRLLA
KEKEREMERRVEGEDVGGGRGCGNCFGWVTKQSGNADGRNERGKTAPNRY
TRAKLPREESQQEEEQMKGGGRGGRERRAWSNLYKNKDKSVVRMIHKREQ
QMAAEKAEEEALVHEIEAQLKHTTMEEVEEAREAGMAARGKMRGYSPAPR
PTSVPNSGGNTPSGYMLASIHQAGLGAVQAAAALQAIPLARKVRKQQQQI
KDLTAVVREQLHQIQTLTETLGEMERATVVLMGRLDEIEEQE*
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Synonyms
Publications