jgi.p|Nanoce1779_2|598689, gene_7419 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|598689
Unique Namegene_7419
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:467780..472411 +

Link to JBrowse

Properties
Property NameValue
TranscriptId598775
ProteinId598689
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:467780..472411 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005249voltage-gated potassium channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0006813potassium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0008076voltage-gated potassium channel complex
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01950NO24G01950Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598689mRNA_7419-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598689mRNA_7419Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|598689

>mRNA_7419-protein ID=mRNA_7419-protein|Name=jgi.p|Nanoce1779_2|598689|organism=Nannochloropsis oceanica|type=polypeptide|length=459bp
MEKSPAPSCPRSPPSPASGPRRSSSFSSPSPSSSSFAHEPQPQSNQPIYE
HGFPSSGLTVQASMTLPPSIPSFHPPAPPSVPPSLPSSLSSPPPPRLPDS
SSADTKRPIFATTNSRSNKAIMHTAAEDEDEDDDNDDDIDVGLNNIFRCI
FLTLHHPTFSPLAQFCALFMGMTVVVSCLAFVLSTIPRFEYQPSTCRNPT
CIPGPDSECTRIICHPIPYWEFFVVEAVTVAIFTVEYVVRMCTVQCVPQR
LIYPNTFLRGGSTLGTTEPSRLTKTLRYAVRWMNIIDLASILPFYLTLYF
DLGEEKLTFLRLLRLMRVIRIFRLGRYTDGGSLLRETLRASSAAVGLMFF
FMTILTLLLASIVYFAEMGQFKVTPESLDGNYFRHNVHGADDEVSPFTSI
PVACYWVIMTATTVGFGDFYPTSTLGRFVAVIAAYLGIVGIALPSTIIGK
SFIEIYFR*
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Synonyms
Publications