NO24G00390, NO24G00390 (gene) Nannochloropsis oceanica

Overview
NameNO24G00390
Unique NameNO24G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2805
Alignment locationchr24:136947..139751 -

Link to JBrowse

Properties
Property NameValue
DescriptionGtpase, Gtp-binding protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:136947..139751 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR031167G_OBG
IPR013646MMR_HSR1_C
IPR006073GTP_binding_domain
Homology
BLAST of NO24G00390 vs. NCBI_GenBank
Match: XP_005852690.1 (gtp-binding protein [Nannochloropsis gaditana CCMP526] >EKU23143.1 gtp-binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 653.7 bits (1685), Expect = 3.800e-184
Identity = 318/377 (84.35%), Postives = 345/377 (91.51%), Query Frame = 0
Query:    2 NGTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFATAADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQ 379
            NG R IPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGE TVGYDP+NDA+WLHGE+HAWVFNNLW++W+SV RRH ATK+S   TLLGQLSGYGANP +IN VLDK+GVRDPVDLGEW+E++VKALVEAFL VRFPTILLLNKADQAGDTDKNISRIVERY+ASKCFVASAGAECFLKICRQK VI+YQAGA NFETIEDI+DDLDFRKARGE VP++EE TAGLE PD KTKKRLEKIRDMVLFRY  TGVWAA+QAAVDLQ PVV YPVKSLSNF+T ADGG VFGNA+LV+PGSTVRSV G+VASGM++ LQYAELLEEGG RRRVGED+VLTG+ NIIKFF+RPVEER    G SQ
Sbjct:  405 NGMRFIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGEATVGYDPVNDAKWLHGEIHAWVFNNLWRRWTSVVRRHTATKSSAASTLLGQLSGYGANPVMINKVLDKLGVRDPVDLGEWEEEEVKALVEAFLSVRFPTILLLNKADQAGDTDKNISRIVERYDASKCFVASAGAECFLKICRQKKVIRYQAGAGNFETIEDIQDDLDFRKARGEHVPAMEEETAGLEMPDSKTKKRLEKIRDMVLFRYGGTGVWAAVQAAVDLQHPVVCYPVKSLSNFSTDADGGRVFGNAILVRPGSTVRSVAGHVASGMVEYLQYAELLEEGGIRRRVGEDHVLTGQKNIIKFFYRPVEERPSHTGHSQ 781          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: EWM24293.1 (gtpase [Nannochloropsis gaditana])

HSP 1 Score: 651.4 bits (1679), Expect = 1.900e-183
Identity = 317/377 (84.08%), Postives = 344/377 (91.25%), Query Frame = 0
Query:    2 NGTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFATAADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQ 379
            NG R IPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGE TVGYDP+NDA+WLHGE+HAWVFNNLW++W+SV RRH ATK+S   TLLGQLSGYGANP +IN VLDK+GVRDPVDLGEW+E++VKALVEAFL VRFPTILLLNKADQAGDTDKNISRIVERY+ASKCFVASAGAECFLKICRQK VI+YQAGA NFETIEDI+DDLDFRKARGE VP++EE TAGLE  D KTKKRLEKIRDMVLFRY  TGVWAA+QAAVDLQ PVV YPVKSLSNF+T ADGG VFGNA+LV+PGSTVRSV G+VASGM++ LQYAELLEEGG RRRVGED+VLTG+ NIIKFF+RPVEER    G SQ
Sbjct:  336 NGMRFIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGEATVGYDPVNDAKWLHGEIHAWVFNNLWRRWTSVVRRHTATKSSAASTLLGQLSGYGANPVMINKVLDKLGVRDPVDLGEWEEEEVKALVEAFLSVRFPTILLLNKADQAGDTDKNISRIVERYDASKCFVASAGAECFLKICRQKKVIRYQAGAGNFETIEDIQDDLDFRKARGEHVPAMEEETAGLEMADSKTKKRLEKIRDMVLFRYGGTGVWAAVQAAVDLQHPVVCYPVKSLSNFSTDADGGRVFGNAILVRPGSTVRSVAGHVASGMVEYLQYAELLEEGGIRRRVGEDHVLTGQKNIIKFFYRPVEERPSHAGHSQ 712          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: OWZ20573.1 (hypothetical protein PHMEG_0004991 [Phytophthora megakarya])

HSP 1 Score: 407.5 bits (1046), Expect = 4.800e-110
Identity = 205/364 (56.32%), Postives = 265/364 (72.80%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKF 363
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVFNNLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++GV++P+DL  W ED+V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y  G+  + T+ED +++        +     E+    L+P + K  +RLE+I DMVLFRY S+GV AAI AAVDL + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T    IIKF
Sbjct:   71 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFNNLWKRWTSIARRHKATKSSLQHTFVGQLSGYGATPSLVSKVLDRLGVKEPLDLSTWGEDEVHHLVKTFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAANKQRFIRYDPGSMFYSTLEDDDEE--------QAKIDAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSSGVRAAINAAVDLADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELAFRVSQFLGSNLAYA----EGEDGRRRAEDEPITSNKLIIKF 422          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: XP_009513922.1 (hypothetical protein PHYSODRAFT_252588 [Phytophthora sojae] >EGZ26647.1 hypothetical protein PHYSODRAFT_252588 [Phytophthora sojae])

HSP 1 Score: 406.0 bits (1042), Expect = 1.400e-109
Identity = 208/364 (57.14%), Postives = 266/364 (73.08%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKF 363
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVFNNLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++G+++P+DL  W ED V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y+ G+  + T+ED  DD +  KA        E+    L+P + K  +RLE+I DMVLFRY STGV AAI AAV+L + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T    IIKF
Sbjct:   71 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFNNLWKRWTSIARRHKATKSSLQNTFVGQLSGYGATPSLVSKVLDRLGLKEPLDLTTWVEDDVHNLVKVFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAANKQRFIRYEPGSMFYSTLED--DDEEQAKA------DAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSTGVRAAINAAVELADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELALRVSQFIGSNLAYA----EGEDGRRRAEDEPITNNXLIIKF 422          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: ETI47687.1 (hypothetical protein F443_08151 [Phytophthora parasitica P1569])

HSP 1 Score: 405.6 bits (1041), Expect = 1.800e-109
Identity = 214/395 (54.18%), Postives = 276/395 (69.87%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDK 394
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVFNNLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++  ++PVDL  W E++V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y+ G+  + T+ED  DD +  KA        E+    L+P + K  +RLE+I DMVLFRY STGV AAI AAV+L + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T  N IIK F   +    +    S   +KE +K   K  K
Sbjct:   71 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFNNLWKRWTSIARRHKATKSSLQATFVGQLSGYGATPSLVSKVLDRLSAKEPVDLSTWGEEEVHVLVKIFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAANKQRFIRYEPGSMFYSTLED--DDEEQAKA------DAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSTGVRAAINAAVELADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELAMRVSQFLGSNLAYA----EGEDGRRRAEDEPITSNNLIIK-FTTTIASSTLTPSDSSATDKEGKKGVKKGAK 452          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: POM63324.1 (P-loop containing nucleoside triphosphate hydrolase, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 405.2 bits (1040), Expect = 2.400e-109
Identity = 203/364 (55.77%), Postives = 266/364 (73.08%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKF 363
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVF NLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++GV++P+DL  W ED+V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y+ G+  + T+ED +++        +     E+    L+P + K  +RLE+I DMVLFRY S+GV AAI AAV+L + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  +D  +T  N IIKF
Sbjct:   71 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGQTNEKGEETVGYDPINDADWLDTEIHQWVFTNLWKRWTSIARRHKATKSSLQNTFVGQLSGYGATPSLVSKVLDRLGVKEPLDLTTWGEDEVHELVKIFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAASKQRFIRYEPGSMFYSTLEDDDEE--------QAKVDAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSSGVRAAINAAVELADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELAFRVSQFLGSNLAYA----EGEDGRRRADDEPITSNNLIIKF 422          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: ETK87622.1 (hypothetical protein L915_07978 [Phytophthora parasitica] >ETL41020.1 hypothetical protein L916_07902 [Phytophthora parasitica] >ETM47428.1 hypothetical protein L914_07866 [Phytophthora parasitica] >ETP17490.1 hypothetical protein F441_08125 [Phytophthora parasitica CJ01A1] >ETP45522.1 hypothetical protein F442_08090 [Phytophthora parasitica P10297])

HSP 1 Score: 404.8 bits (1039), Expect = 3.100e-109
Identity = 214/395 (54.18%), Postives = 276/395 (69.87%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDK 394
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVFNNLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++  ++PVDL  W E++V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y+ G+  + T+ED  DD +  KA        E+    L+P + K  +RLE+I DMVLFRY STGV AAI AAV+L + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T  N IIK F   +    +    S   +KE +K   K  K
Sbjct:   71 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFNNLWKRWTSIARRHKATKSSLQATFVGQLSGYGATPSLVSKVLDRLSAKEPVDLSTWGEEEVHDLVKIFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAANKQRFIRYEPGSMFYSTLED--DDEEQAKA------DAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSTGVRAAINAAVELADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELAMRVSQFLGSNLAYA----EGEDGRRRAEDEPITSNNLIIK-FTTTIASSTLTPSDSSATDKEGKKGVKKGAK 452          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: XP_008904903.1 (hypothetical protein PPTG_11359 [Phytophthora parasitica INRA-310] >ETL94200.1 hypothetical protein L917_07798 [Phytophthora parasitica] >ETN09757.1 hypothetical protein PPTG_11359 [Phytophthora parasitica INRA-310] >ETO76402.1 hypothetical protein F444_08205 [Phytophthora parasitica P1976])

HSP 1 Score: 404.8 bits (1039), Expect = 3.100e-109
Identity = 214/395 (54.18%), Postives = 276/395 (69.87%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDK 394
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVFNNLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++  ++PVDL  W E++V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y+ G+  + T+ED  DD +  KA        E+    L+P + K  +RLE+I DMVLFRY STGV AAI AAV+L + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T  N IIK F   +    +    S   +KE +K   K  K
Sbjct:   71 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFNNLWKRWTSIARRHKATKSSLQATFVGQLSGYGATPSLVSKVLDRLSAKEPVDLSTWGEEEVHNLVKIFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAANKQRFIRYEPGSMFYSTLED--DDEEQAKA------DAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSTGVRAAINAAVELADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELAMRVSQFLGSNLAYA----EGEDGRRRAEDEPITSNNLIIK-FTTTIASSTLTPSDSSATDKEGKKGVKKGAK 452          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: KUF77216.1 (putative GTP-binding protein [Phytophthora nicotianae])

HSP 1 Score: 404.8 bits (1039), Expect = 3.100e-109
Identity = 214/395 (54.18%), Postives = 276/395 (69.87%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDK 394
            GTR IPVKLLDVAGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVFNNLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD++  ++PVDL  W E++V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AECFL+   ++  I+Y+ G+  + T+ED  DD +  KA        E+    L+P + K  +RLE+I DMVLFRY STGV AAI AAV+L + VVVYPVKSL +FAT     A   G+F +A++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T  N IIK F   +    +    S   +KE +K   K  K
Sbjct:   29 GTRYIPVKLLDVAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFNNLWKRWTSIARRHKATKSSLQATFVGQLSGYGATPSLVSKVLDRLSAKEPVDLSTWGEEEVHNLVKIFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECFLRAANKQRFIRYEPGSMFYSTLED--DDEEQAKA------DAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSTGVRAAINAAVELADVVVVYPVKSLKSFATNTTPGATNKGIFADAVIVKRGTTIKELAMRVSQFLGSNLAYA----EGEDGRRRAEDEPITSNNLIIK-FTTTIASSTLTPSDSSATDKEGKKGVKKGAK 410          
BLAST of NO24G00390 vs. NCBI_GenBank
Match: XP_002896772.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66707.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 401.0 bits (1029), Expect = 4.500e-108
Identity = 200/364 (54.95%), Postives = 265/364 (72.80%), Query Frame = 0
Query:    3 GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFAT----AADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYVLTGKNNIIKF 363
            GTR IPVKLLD+AGL+PGASEGAGLGNKFLDDLRHA VLMHI+DVSG TNEKGE TVGYDPINDA+WL  E+H WVF+NLWK+W+S+ARRH ATK+S+  T +GQLSGYGA P++++ VLD+MG+++P+DL  W E++V  LV+ FL +RFPT+L+LNKADQ  DTD+NI +IVE+Y + +CFVASA AEC L+   ++  I+Y+ G+  + T+ED +++        +     E+    L+P + K  +RLE+I DMVLFRY S+GV AAI AAV+L + VVVYPVKSL +FAT     A   G+F + ++VK G+T++ +   V+  +   L YA    EG + RR  ED  +T  N IIKF
Sbjct:   71 GTRYIPVKLLDIAGLIPGASEGAGLGNKFLDDLRHAQVLMHIIDVSGHTNEKGEETVGYDPINDADWLDTEIHQWVFSNLWKRWTSIARRHKATKSSLQTTFVGQLSGYGATPSLVSKVLDRMGLKEPLDLSTWGEEEVHNLVKIFLDIRFPTVLVLNKADQGDDTDRNIEKIVEKYGSDRCFVASAAAECILRAATKQRFIRYEPGSMFYSTLEDDDEE--------QAKVDAEKGLGPLKPIEKKIHRRLERISDMVLFRYGSSGVRAAINAAVELADVVVVYPVKSLKSFATNTTPVATNKGIFADVVIVKRGTTIKELALRVSQFLGSNLAYA----EGEDGRRRAEDEPITSSNLIIKF 422          
The following BLAST results are available for this feature:
BLAST of NO24G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852690.13.800e-18484.35gtp-binding protein [Nannochloropsis gaditana CCMP... [more]
EWM24293.11.900e-18384.08gtpase [Nannochloropsis gaditana][more]
OWZ20573.14.800e-11056.32hypothetical protein PHMEG_0004991 [Phytophthora m... [more]
XP_009513922.11.400e-10957.14hypothetical protein PHYSODRAFT_252588 [Phytophtho... [more]
ETI47687.11.800e-10954.18hypothetical protein F443_08151 [Phytophthora para... [more]
POM63324.12.400e-10955.77P-loop containing nucleoside triphosphate hydrolas... [more]
ETK87622.13.100e-10954.18hypothetical protein L915_07978 [Phytophthora para... [more]
XP_008904903.13.100e-10954.18hypothetical protein PPTG_11359 [Phytophthora para... [more]
KUF77216.13.100e-10954.18putative GTP-binding protein [Phytophthora nicotia... [more]
XP_002896772.14.500e-10854.95conserved hypothetical protein [Phytophthora infes... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL039nonsL039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR026ngnoR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00390.6NO24G00390.6-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00390.5NO24G00390.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00390.4NO24G00390.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00390.3NO24G00390.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00390.2NO24G00390.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00390.1NO24G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598038gene_7267Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00390.6NO24G00390.6Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00390.5NO24G00390.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00390.4NO24G00390.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00390.3NO24G00390.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00390.2NO24G00390.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00390.1NO24G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00390 ID=NO24G00390|Name=NO24G00390|organism=Nannochloropsis oceanica|type=gene|length=2805bp
CGGAAAGTTTGTCTAGGTGGAGGGGTGGGAGGTTGACAAAGTAGCGGGGC
CTCATGTGACATCTCACAACCACCACCACATCACACAACATGACAATACA
GCGCGGTCGTAAACTGACTCCAAATCATGCCACGATGTCTAGGTGCTGTC
GGTCACAACTTCTCCTCTTGAAGACTATCAAGCAATGCTTCACCACTTTC
CATCCGCACACCAACCTCTGGCACCACCATACACGATGCAAACAGTCACA
GGGAGGAGGAAGAGGCGCAAGAGGATGGAGGTGATTATTGGCTGCGTGGG
CAAGCCCAGTGTGGGCAAGAGTACATTTTTCAATGCCGTCAGTGGGGGCC
AGGCCAAAACGGGTACGTAGAGGGTCTAAGCTAATAGGAGGGCAGGAGGG
AGGGTGACACGAAGGGTTGCGTGGGAGGATGAGATCAATGGATTGGATAA
AAATCTAATCTGATTGGTACTGGCGTCCCAAGCCGTGACGTCTACGTCTC
TCACCAGTGTGCGCTTTATTTTATCATTTATTTCATGCTATCACGTCATC
TGCCTCTCCTTCCCTTTGCCCACCCTCCGCCTCCAAGGCAACTTCCCTTT
CACGACTATCGAGgtaagccatgtccctctagaaaaagcaggagtagatg
ggagtaactagatctatgtttatctccctctttgcctcgactgacacaaa
cacacacagCCTAATACCGGAGTGACCTTCTACCGAGTCCCCTGCCCTTG
TGTCTCCCATGGCAAGGTGAAGGAATGCAAGCCCAAGTACGGCCGGTGCA
TGAATGGCACACGACTCATTCCAGTCAAGCTTTTGGACGTGGCGGGTTTG
GTGCCGGGAGCGTCGGAGgtgagggaaggaggggggaagcaatggaggaa
gggacgaatggaaagaggacacagagataggaagagagggggctctgcgt
ggaggggagattacatatgcttaaagcatttattatgatcctgcttatat
gaagagaagtgcataaccaaccgtgtttattttcacgttttccccttccc
ccattcctttttttctattgcctgacaccagGGGGCGGGATTGGGCAATA
AGTTTCTCGATGACTTGCGCCATGCCGACGTACTCATGCACATCCTTGAC
GTCTCTGGAACGACCAACGAAAAAGGCGAGACCACCGTCGGTTACGACCC
GATTAATGACGCGGAATGGTTGCATGGGGAGGTCCACGCGTGGGTCTTCA
ACAATCTGTGGAAGAAATGGTCGAGTGTCGCAAGGCGGCACGCGGCGACC
AAGGCCTCGGTGGGCCCGACGTTGTTGGGGCAATTGTCCGGGTATGgtaa
gtgaagggctttaggtggaaaggtatacaggaaagaaggagaaggatgcc
aagtttggtcctggtcggccagattcgcgcgcccttcgtcttgtgagcct
gtagaagaatgcggtcgaaaaagaatcacgattccgcctgttttatttat
ctatatttcatcacagGAGCCAATCCCGCGGTGATTAATGCAGTTCTGGA
TAAGATGGGTGTGCGGGACCCTGTGGACTTGGGCGAATGGGACGAGGACC
AAGTCAAGGCGCTTGTAGAAGCATTTTTGCTTGTGCGCTTTCCGACGATC
CTCTTACTCAACAAGGCCGATCAGgtatgtcttgccatgttctaatggtc
ggtaagcctgtgactgtttcttattgacgttctcaatcctccgtcacact
gcagGCGGGAGATACTGACAAGAACATCTCTCGGATCGTCGAGCGGTACG
AGGCCTCGAAATGCTTTGTTGCCAGCGCGGGCGCCGAGTGCTTTCTCAAG
ATATGCCGACAAAAAAATGTGATCAAATACCAGGCGGGTGCTAGCAATTT
TGAGACGATCGAGGACATTGAGGATGATTTGGACTTTCGCAAgtatgtct
ttggggtttaggggaaagggaaaggactcttctgtgtgggagaggcgtta
cgcgctacgacttgtgtatacgtgtgcgtgagtgtatatttgtgtatgct
ttactcttactatccaactgtgagtctttttctttttctagccgcttgta
catcgaagtctttttgcatggacttactcacggcccccacacctcgctcg
caaacacattcagGGCACGTGGCGAGACCGTCCCTTCGCTAGAGGAAGCC
ACAGCAGGTTTGGAACCACCCGACGGCAAGACTAAGAAACGCCTCGAGAA
AATTCGAGACATGGTCCTCTTTCGGTATCAAAGCACAGGAGTCTGGGCCG
CTATCCAGGCTGCAGTGGATTTGCAAGAGCCTGTGGTTGTATACCCCGTC
AAGTCCTTGAGCAATTTCGCAACAGCAGCGGACGGAGGCGGGGTGTTTGG
TAACGCCATGTTGGTGAAACCGGGTTCGACGGTTCGCTCGGTAGTGGGAT
ACGTGGCCTCAGGTATGATGGACTTATTGCAGTATGCAGAACTACTGGAA
GAGGGGGGTAATCGGCGGCGCGTCGGGGAGGATTATGTGCTGACAGGCAA
GAATAACATCATCAAGTTCTTCTTTCGCCCTGTCGAGGAACGACAAGTGC
AAGGGGGGTCGTCGCAAGGCAAAGAGAAGGAGCAACAGAAGGCGAGACCA
AAGAAAGACAAAGGCGTGGAGGGAGAGAATGGGAGTGGGGAGGGTGGCGA
GATGTAAAAATAGAAACAAAGTACCCAGCAGAGGCATAGAAAACAAATGG
ACATGCCTTTATTTGTTTGTTGGCGATTCAATTATCCTCACGCGGCAAAG
AAAAC
back to top

protein sequence of NO24G00390.6

>NO24G00390.6-protein ID=NO24G00390.6-protein|Name=NO24G00390.6|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVAR
RHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQV
KALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGA
ECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATA
GLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKS
LSNFATAADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEG
GNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKK
DKGVEGENGSGEGGEM*
back to top

protein sequence of NO24G00390.5

>NO24G00390.5-protein ID=NO24G00390.5-protein|Name=NO24G00390.5|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVAR
RHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQV
KALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGA
ECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATA
GLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKS
LSNFATAADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEG
GNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKK
DKGVEGENGSGEGGEM*
back to top

protein sequence of NO24G00390.4

>NO24G00390.4-protein ID=NO24G00390.4-protein|Name=NO24G00390.4|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MNGTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGT
TNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASV
GPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLL
VRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQ
KNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKT
KKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFATAAD
GGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGED
YVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDKGVEGENG
SGEGGEM*
back to top

protein sequence of NO24G00390.3

>NO24G00390.3-protein ID=NO24G00390.3-protein|Name=NO24G00390.3|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MNGTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGT
TNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASV
GPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLL
VRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQ
KNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKT
KKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFATAAD
GGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGED
YVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDKGVEGENG
SGEGGEM*
back to top

protein sequence of NO24G00390.2

>NO24G00390.2-protein ID=NO24G00390.2-protein|Name=NO24G00390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MHILDVSGTTNEKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVAR
RHAATKASVGPTLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQV
KALVEAFLLVRFPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGA
ECFLKICRQKNVIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATA
GLEPPDGKTKKRLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKS
LSNFATAADGGGVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEG
GNRRRVGEDYVLTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKK
DKGVEGENGSGEGGEM*
back to top

protein sequence of NO24G00390.1

>NO24G00390.1-protein ID=NO24G00390.1-protein|Name=NO24G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bp
MLHHFPSAHQPLAPPYTMQTVTGRRKRRKRMEVIIGCVGKPSVGKSTFFN
AVSGGQAKTGNFPFTTIEPNTGVTFYRVPCPCVSHGKVKECKPKYGRCMN
GTRLIPVKLLDVAGLVPGASEGAGLGNKFLDDLRHADVLMHILDVSGTTN
EKGETTVGYDPINDAEWLHGEVHAWVFNNLWKKWSSVARRHAATKASVGP
TLLGQLSGYGANPAVINAVLDKMGVRDPVDLGEWDEDQVKALVEAFLLVR
FPTILLLNKADQAGDTDKNISRIVERYEASKCFVASAGAECFLKICRQKN
VIKYQAGASNFETIEDIEDDLDFRKARGETVPSLEEATAGLEPPDGKTKK
RLEKIRDMVLFRYQSTGVWAAIQAAVDLQEPVVVYPVKSLSNFATAADGG
GVFGNAMLVKPGSTVRSVVGYVASGMMDLLQYAELLEEGGNRRRVGEDYV
LTGKNNIIKFFFRPVEERQVQGGSSQGKEKEQQKARPKKDKGVEGENGSG
EGGEM*
back to top
Synonyms
Publications