NO22G02140, NO22G02140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G02140 vs. NCBI_GenBank
Match: EWM20538.1 (ccr4 carbon catabolite repression 4, partial [Nannochloropsis gaditana]) HSP 1 Score: 94.0 bits (232), Expect = 1.100e-15 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0 Query: 1 MEWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRKPLNADG 57 M W RR K+LEE+TRW PDVVTLQE+DH+FDDL PA LGYTG FVRKPLN DG Sbjct: 99 MAWLYRREKVLEEVTRWNPDVVTLQEIDHYFDDLLPAFTSLGYTGAFVRKPLNMDG 154
BLAST of NO22G02140 vs. NCBI_GenBank
Match: OQR80520.1 (hypothetical protein THRCLA_12005 [Thraustotheca clavata]) HSP 1 Score: 86.3 bits (212), Expect = 2.300e-13 Identity = 75/260 (28.85%), Postives = 97/260 (37.31%), Query Frame = 0 Query: 1 MEWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRKPLN--------ADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPHDKEGRVTSPSLPXXXXXXXXXXXXXXXXXXYRAECVPLLRREGFESVY--DLEDPNLFTTWKFR 251 + W R + +LEEI R+ PDVV LQEVDHF D +P L+R G+ GLF KP + DG A F K SS ++S + THLKA K A+GE +R QA+ L A I S P+++CGDFNA P E Y A +R GF+S Y D ++P +TTWK R Sbjct: 51 LSWSFRSLLLLEEILRFSPDVVCLQEVDHFDDWFEPELRRHGFFGLFAPKPHSPCLFVNDKPDGCAVFFKESSFFMLSHSVLNYAQSNQVALIVDLQHKESDQYVR---------------------------------IACTHLKATKNASGEVLREEQAKILCASI------------GSGPIVVCGDFNATPDSHE---------------------------YPALAYKAMRNHGFDSAYCIDGKEPE-YTTWKVR 237
BLAST of NO22G02140 vs. NCBI_GenBank
Match: XP_012206900.1 (hypothetical protein SPRG_11328 [Saprolegnia parasitica CBS 223.65] >KDO22376.1 hypothetical protein SPRG_11328 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.4 bits (202), Expect = 3.300e-12 Identity = 73/260 (28.08%), Postives = 94/260 (36.15%), Query Frame = 0 Query: 1 MEWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRKPLN--------ADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPHDKEGRVTSPSLPXXXXXXXXXXXXXXXXXXYRAECVPLLRREGFESVYDLEDPN-LFTTWKFRP 252 + W RR +L+EI R+ PD+V L+EVDHF D +P L GYTGLF KP + DG A FV V H E LV THLKA K AAGE +R +A L A S G +++CGDFNA PH +P++P +++ G+ S Y E +TTWK RP Sbjct: 51 LAWAHRRQPLLDEILRFAPDIVCLEEVDHFHDWFEPQLAAHGYTGLFAPKPDSPCLQVSDQRDGCAVFVNARFR--VLRHDVLSYACYVPPDTTTLQPQNQVALLVELALRDSP---------------------HEVLVACTHLKAAKDAAGEAIRTQEAAMLC-------RALSAKQGAGHAIVVCGDFNAVPH------PTPAMP-------------------ATTYATMVKDHGYASAYCQEGREPAYTTWKVRP 255
BLAST of NO22G02140 vs. NCBI_GenBank
Match: XP_009826493.1 (hypothetical protein H257_03892 [Aphanomyces astaci] >ETV84801.1 hypothetical protein H257_03892 [Aphanomyces astaci]) HSP 1 Score: 81.3 bits (199), Expect = 7.400e-12 Identity = 75/263 (28.52%), Postives = 100/263 (38.02%), Query Frame = 0 Query: 1 MEWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRKPLN--------ADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVV--NTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPHDKEGRVTSPSLPXXXXXXXXXXXXXXXXXXYRAECVPLLRREGFESVYDL--EDPNLFTTWKFRP 252 + W RR IL EI R+ PD++ L+E+DH FD +Q L RLGY+G F K + DG A FV + H E+ LVV THLK+ K+ GE +R SQA+QL AH+ R G +P ++CGDFNA P D + Y A+ +P + G+ S Y PN +TTWK RP Sbjct: 54 LPWSYRRNLILAEIARYAPDIICLEELDH-FDWMQDQLDRLGYSGHFAAKRESPCLECSDLPDGCAIFVN----RIKHLH----------------------IKHMCAPRYEHDDGRGAALPSNQLALVAHVLQNEQSLVVVACTHLKSTKSHQGEVIRLSQAKQLHAHV-------LRHGGADIPTIICGDFNATPDDND--------------------------KYAAQAIPAMLDLGWTSAYAQAGSTPN-YTTWKTRP 255
BLAST of NO22G02140 vs. NCBI_GenBank
Match: ETP48970.1 (hypothetical protein F442_05397 [Phytophthora parasitica P10297]) HSP 1 Score: 80.5 bits (197), Expect = 1.300e-11 Identity = 54/189 (28.57%), Postives = 80/189 (42.33%), Query Frame = 0 Query: 2 EWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRK--PLNADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPH 189 +W R V++++EI RW P +V LQEVDHF D +P +++ G+ G++ R+ DG A FVK S +VSSH ++V NTHL + +++ +Q L+ H+ + R + H LPVLL GDFN APH Sbjct: 97 DWEYRSVRLMKEILRWSPHIVNLQEVDHFEDFFEPRMKKAGFVGVYKRRTGENTHDGCAIFVKKSMFRIVSSHPIEYHVLDHPVLDRDNIALTAVVEAKNSVGGPSP---------------------ARFVVTNTHL--LSNPNRGEIKLAQLGMLLKHLTSLR----KEHNAILPVLLSGDFNLAPH 258
BLAST of NO22G02140 vs. NCBI_GenBank
Match: ETI51282.1 (hypothetical protein F443_05347 [Phytophthora parasitica P1569] >ETK91145.1 hypothetical protein L915_05208 [Phytophthora parasitica] >ETL44547.1 hypothetical protein L916_05163 [Phytophthora parasitica] >ETL97719.1 hypothetical protein L917_05047 [Phytophthora parasitica] >ETP21047.1 hypothetical protein F441_05354 [Phytophthora parasitica CJ01A1] >KUF76078.1 Carbon catabolite repressor protein 4 3 [Phytophthora nicotianae]) HSP 1 Score: 79.7 bits (195), Expect = 2.200e-11 Identity = 56/189 (29.63%), Postives = 80/189 (42.33%), Query Frame = 0 Query: 2 EWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRK--PLNADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPH 189 +W R V++++EI RW P +V LQEVDHF D +P +++ G+ G++ R+ DG A FVK S +VSSH ++V NTHL GE ++ +Q L+ H+ + R + H LPVLL GDFN APH Sbjct: 97 DWEYRSVRLMKEILRWSPHIVNLQEVDHFEDFFEPRMKKAGFVGVYKRRTGENTHDGCAIFVKKSMFRIVSSHPIEYHVLDHPVLDRDNIALTAVVEAKNSVGGPSP---------------------ARFVVTNTHL-LFNPNRGE-IKLAQLDMLLKHLTSLR----KEHNAILPVLLSGDFNLAPH 258
BLAST of NO22G02140 vs. NCBI_GenBank
Match: ETM50877.1 (hypothetical protein L914_05163 [Phytophthora parasitica]) HSP 1 Score: 79.7 bits (195), Expect = 2.200e-11 Identity = 56/189 (29.63%), Postives = 80/189 (42.33%), Query Frame = 0 Query: 2 EWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRK--PLNADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPH 189 +W R V++++EI RW P +V LQEVDHF D +P +++ G+ G++ R+ DG A FVK S +VSSH ++V NTHL GE ++ +Q L+ H+ + R + H LPVLL GDFN APH Sbjct: 97 DWEYRSVRLMKEILRWSPHIVNLQEVDHFEDFFEPRMKKAGFVGVYKRRTGENTHDGCAIFVKKSMFRIVSSHPIEYHVLDHPVLDRDNIALTAVVEAKNSVGGPSP---------------------ARFVVTNTHL-LFNPNRGE-IKLAQLGMLLKHLTSLR----KEHNAILPVLLSGDFNLAPH 258
BLAST of NO22G02140 vs. NCBI_GenBank
Match: XP_008902779.1 (hypothetical protein PPTG_09524 [Phytophthora parasitica INRA-310] >ETN11848.1 hypothetical protein PPTG_09524 [Phytophthora parasitica INRA-310]) HSP 1 Score: 79.7 bits (195), Expect = 2.200e-11 Identity = 56/189 (29.63%), Postives = 80/189 (42.33%), Query Frame = 0 Query: 2 EWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRK--PLNADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPH 189 +W R V++++EI RW P +V LQEVDHF D +P +++ G+ G++ R+ DG A FVK S +VSSH ++V NTHL GE ++ +Q L+ H+ + R + H LPVLL GDFN APH Sbjct: 27 DWEYRSVRLMKEILRWSPHIVNLQEVDHFEDFFEPRMKKAGFVGVYKRRTGENTHDGCAIFVKKSMFRIVSSHPIEYHVLDHPVLDRDNIALTAVVEAKNSVGGPSP---------------------ARFVVTNTHL-LFNPNRGE-IKLAQLDMLLKHLTSLR----KEHNAILPVLLSGDFNLAPH 188
BLAST of NO22G02140 vs. NCBI_GenBank
Match: ETO80005.1 (hypothetical protein F444_05394 [Phytophthora parasitica P1976]) HSP 1 Score: 79.7 bits (195), Expect = 2.200e-11 Identity = 56/189 (29.63%), Postives = 80/189 (42.33%), Query Frame = 0 Query: 2 EWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRK--PLNADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPH 189 +W R V++++EI RW P +V LQEVDHF D +P +++ G+ G++ R+ DG A FVK S +VSSH ++V NTHL GE ++ +Q L+ H+ + R + H LPVLL GDFN APH Sbjct: 97 DWEYRSVRLMKEILRWSPHIVNLQEVDHFEDFFEPRMKKAGFVGVYKRRTGENTHDGCAIFVKKSMFRIVSSHPIEYHVLDHPVLDRDNIALTAVVEAKNSVGGPSP---------------------ARFVVTNTHL-LFNPNRGE-IKLAQLDMLLKHLTSLR----KEHNAILPVLLSGDFNLAPH 258
BLAST of NO22G02140 vs. NCBI_GenBank
Match: POM63986.1 (Hypothetical protein PHPALM_20546 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 78.2 bits (191), Expect = 6.300e-11 Identity = 57/189 (30.16%), Postives = 79/189 (41.80%), Query Frame = 0 Query: 2 EWGLRRVKILEEITRWQPDVVTLQEVDHFFDDLQPALQRLGYTGLFVRK--PLNADGAATFVKTSSLEVVSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEWLVVNTHLKAMKTAAGEQVRASQARQLVAHIRAQREAYSRAHGRSLPVLLCGDFNAAPH 189 +W R V++++EI RW P VV LQEVDHF D +P L++ G+ G++ R+ DG A FVK S +VSS ++V NTHL GE ++ +Q L+ H+ + R+ H LPVLL GDFN APH Sbjct: 49 DWEYRSVRLVKEILRWSPHVVNLQEVDHFEDFFEPRLKQAGFVGVYKRRTGETTHDGCAIFVKKSMFRIVSSQSVEYHVQGHPVLNRDNIALTAVVETKSSVNGSNP---------------------SRFVVANTHL-LFNPNRGE-IKLAQLDMLLRHVTSLRQ----EHNPVLPVLLSGDFNLAPH 210 The following BLAST results are available for this feature:
BLAST of NO22G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G02140 ID=NO22G02140|Name=NO22G02140|organism=Nannochloropsis oceanica|type=gene|length=2792bpback to top protein sequence of NO22G02140.1 >NO22G02140.1-protein ID=NO22G02140.1-protein|Name=NO22G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=458bpback to top protein sequence of NO22G02140.2 >NO22G02140.2-protein ID=NO22G02140.2-protein|Name=NO22G02140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=385bpback to top protein sequence of NO22G02140.3 >NO22G02140.3-protein ID=NO22G02140.3-protein|Name=NO22G02140.3|organism=Nannochloropsis oceanica|type=polypeptide|length=471bpback to top Synonyms
Publications
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