NO22G01440, NO22G01440 (gene) Nannochloropsis oceanica

Overview
NameNO22G01440
Unique NameNO22G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length780
Alignment locationchr22:425001..425780 +

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Properties
Property NameValue
DescriptionElongation factor 1-alpha
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:425001..425780 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000795TF_GTP-bd_dom
Homology
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: EWM21485.1 (translation elongation factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 464.5 bits (1194), Expect = 2.100e-127
Identity = 225/237 (94.94%), Postives = 228/237 (96.20%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            MGKEK HVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAE+GKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMI++STNMAWYKGPTLLEALDNINPP  P   P   P
Sbjct:    1 MGKEKVHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLP 237
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BLAST of NO22G01440 vs. NCBI_GenBank
Match: BAN33726.1 (elongation factor 1alpha [Eukaryota sp. PCbi66])

HSP 1 Score: 427.9 bits (1099), Expect = 2.200e-116
Identity = 205/237 (86.50%), Postives = 218/237 (91.98%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            MGKEKTHVN+VVIGHVD+GKSTTTGHLIYKCGGIDKRVIEKFEKEAAE+GKSSFKYAWVLDKLKAERERGITIDIALWKFE+ KYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGI K+GQTREHALLA+TLGVKQMIV +NKMDD SVNYGE R++EIK+EVS +LKKVGY P KVPFIPISGWNGDNM+EKSTNM WYKG TLLEALD+I PP  P   P   P
Sbjct:    1 MGKEKTHVNIVVIGHVDSGKSTTTGHLIYKCGGIDKRVIEKFEKEAAELGKSSFKYAWVLDKLKAERERGITIDIALWKFETTKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGISKEGQTREHALLAYTLGVKQMIVAINKMDDKSVNYGEKRYSEIKDEVSKFLKKVGYNPEKVPFIPISGWNGDNMLEKSTNMPWYKGHTLLEALDDITPPKRPSDKPLRLP 237
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BLAST of NO22G01440 vs. NCBI_GenBank
Match: ABN54676.1 (translation elongation factor 1 alpha [Aphanomyces cochlioides])

HSP 1 Score: 424.5 bits (1090), Expect = 2.400e-115
Identity = 200/237 (84.39%), Postives = 216/237 (91.14%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            M KEKTH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPK++FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YGE R+NEIKEEV+NYLKKVGYKPAK+PF+PISGW GDNMIEKS NM WYKGP LLEALDN+NPP  P   P   P
Sbjct:    1 MPKEKTHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGEGRYNEIKEEVTNYLKKVGYKPAKIPFVPISGWEGDNMIEKSPNMPWYKGPYLLEALDNLNPPKRPTDKPLRLP 237
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: XP_009833124.1 (elongation factor 1-alpha [Aphanomyces astaci] >XP_009837585.1 elongation factor 1-alpha [Aphanomyces astaci] >ETV72799.1 elongation factor 1-alpha [Aphanomyces astaci] >ETV77337.1 elongation factor 1-alpha [Aphanomyces astaci])

HSP 1 Score: 423.3 bits (1087), Expect = 5.400e-115
Identity = 199/237 (83.97%), Postives = 216/237 (91.14%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            M KEKTH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPK++FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YGE R+NEIKEEV+NYLKKVGYKPAK+PF+PISGW GDNMIE+S NMAWYKGP LLEALD +NPP  P   P   P
Sbjct:    1 MPKEKTHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADAAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGEGRYNEIKEEVTNYLKKVGYKPAKIPFVPISGWEGDNMIERSPNMAWYKGPYLLEALDGLNPPKRPTDKPLRLP 237
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BLAST of NO22G01440 vs. NCBI_GenBank
Match: XP_009520546.1 (hypothetical protein PHYSODRAFT_354062 [Phytophthora sojae] >XP_009520658.1 hypothetical protein PHYSODRAFT_354065 [Phytophthora sojae] >EGZ25258.1 hypothetical protein PHYSODRAFT_354062 [Phytophthora sojae] >EGZ25370.1 hypothetical protein PHYSODRAFT_354065 [Phytophthora sojae])

HSP 1 Score: 422.9 bits (1086), Expect = 7.000e-115
Identity = 200/237 (84.39%), Postives = 215/237 (90.72%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            MGKEKTH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPK++FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EVS YLKKVGYKPAK+PF+PISGW GDNMIEKS NM WYKGP LLEALDN+NPP  P   P   P
Sbjct:    1 MGKEKTHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVSTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDNLNPPKRPLDKPLRLP 237
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: XP_008873087.1 (elongation factor 1-alpha [Aphanomyces invadans] >XP_008874905.1 elongation factor 1-alpha [Aphanomyces invadans] >ETV96642.1 elongation factor 1-alpha [Aphanomyces invadans] >ETV98212.1 elongation factor 1-alpha [Aphanomyces invadans])

HSP 1 Score: 422.5 bits (1085), Expect = 9.200e-115
Identity = 199/237 (83.97%), Postives = 215/237 (90.72%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            M KEKTH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPK++FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YGE R+NEIKEEV+NYLKKVGYKPAK+PF+PISGW GDNMIEKS NM WYKGP LLEALD +NPP  P   P   P
Sbjct:    1 MPKEKTHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADAAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGEGRYNEIKEEVTNYLKKVGYKPAKIPFVPISGWEGDNMIEKSPNMPWYKGPYLLEALDGLNPPKRPTDKPLRLP 237
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: AAH80974.1 (LOC493206 protein, partial [Xenopus tropicalis])

HSP 1 Score: 421.4 bits (1082), Expect = 2.000e-114
Identity = 198/234 (84.62%), Postives = 214/234 (91.45%), Query Frame = 0 
Query:    4 EKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            EKTH++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPK++FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YGE R+NEIKEEV+NYLKKVGYKPAK+PF+PISGW GDNMIEKS NM WYKGP LLEALDN+NPP  P   P   P
Sbjct:    1 EKTHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKFFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGEGRYNEIKEEVTNYLKKVGYKPAKIPFVPISGWEGDNMIEKSPNMPWYKGPYLLEALDNLNPPKRPTDKPLRLP 234
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: XP_008905546.1 (elongation factor 1-alpha [Phytophthora parasitica INRA-310] >ETN08985.1 elongation factor 1-alpha [Phytophthora parasitica INRA-310])

HSP 1 Score: 421.4 bits (1082), Expect = 2.000e-114
Identity = 198/237 (83.54%), Postives = 215/237 (90.72%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            MGKEK H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EV+ YLKKVGYKPAK+PF+PISGW GDNMI++STNM WYKGP LLEALDN+NPP  P   P   P
Sbjct:  202 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNPPKRPVDKPLRLP 438
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: XP_008905681.1 (elongation factor 1-alpha [Phytophthora parasitica INRA-310] >ABA00716.1 translation elongation factor 1 alpha [Phytophthora parasitica] >ETI46976.1 elongation factor 1-alpha [Phytophthora parasitica P1569] >ETN09120.1 elongation factor 1-alpha [Phytophthora parasitica INRA-310] >ETO75552.1 elongation factor 1-alpha [Phytophthora parasitica P1976] >ETP16631.1 elongation factor 1-alpha [Phytophthora parasitica CJ01A1] >ETP44695.1 elongation factor 1-alpha [Phytophthora parasitica P10297] >ETP44841.1 elongation factor 1-alpha [Phytophthora parasitica P10297] >KUF78794.1 Elongation factor 1-alpha [Phytophthora nicotianae] >KUF83866.1 Elongation factor 1-alpha [Phytophthora nicotianae] >KUF90512.1 hypothetical protein AM588_10010410 [Phytophthora nicotianae])

HSP 1 Score: 421.4 bits (1082), Expect = 2.000e-114
Identity = 198/237 (83.54%), Postives = 215/237 (90.72%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACP 238
            MGKEK H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEAAE+GK+SFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIV +NKMDDSSV YG+AR+ EIK EV+ YLKKVGYKPAK+PF+PISGW GDNMI++STNM WYKGP LLEALDN+NPP  P   P   P
Sbjct:    1 MGKEKVHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNPPKRPVDKPLRLP 237
[Close]
BLAST of NO22G01440 vs. NCBI_GenBank
Match: ABN54675.1 (translation elongation factor 1 alpha, partial [Saprolegnia parasitica])

HSP 1 Score: 421.0 bits (1081), Expect = 2.700e-114
Identity = 199/229 (86.90%), Postives = 212/229 (92.58%), Query Frame = 0 
Query:    1 MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMGKSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIEKSTNMAWYKGPTLLEALDNINPPSAP 230
            M KEK H++LVVIGHVDAGKSTTTGHLIYKCGGIDKR IEKFEKEA E+GKSSFKYAWVLD LKAERERGITIDIALWKFESPKY+FT+IDAPGHRDFIKNMITGTSQAD AIL+VASG GEFEAGI K+GQTREHALLAFTLGV+QMIV +NKMDDSSV YG+AR+ EIKEEVSNYLKKVGYKPAKVPF+PISGW GDNMIEKS NM WYKGP LLEALDN+NPP  P
Sbjct:    1 MPKEKIHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVLDNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGQARYEEIKEEVSNYLKKVGYKPAKVPFVPISGWEGDNMIEKSGNMPWYKGPCLLEALDNLNPPKRP 229
The following BLAST results are available for this feature:
BLAST of NO22G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21485.12.100e-12794.94translation elongation factor 1 [Nannochloropsis g... [more]
BAN33726.12.200e-11686.50elongation factor 1alpha [Eukaryota sp. PCbi66][more]
ABN54676.12.400e-11584.39translation elongation factor 1 alpha [Aphanomyces... [more]
XP_009833124.15.400e-11583.97elongation factor 1-alpha [Aphanomyces astaci] >XP... [more]
XP_009520546.17.000e-11584.39hypothetical protein PHYSODRAFT_354062 [Phytophtho... [more]
XP_008873087.19.200e-11583.97elongation factor 1-alpha [Aphanomyces invadans] >... [more]
AAH80974.12.000e-11484.62LOC493206 protein, partial [Xenopus tropicalis][more]
XP_008905546.12.000e-11483.54elongation factor 1-alpha [Phytophthora parasitica... [more]
XP_008905681.12.000e-11483.54elongation factor 1-alpha [Phytophthora parasitica... [more]
ABN54675.12.700e-11486.90translation elongation factor 1 alpha, partial [Sa... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004117NSK004117Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01440.1NO22G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|544243gene_7152Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g64gene8930Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01440.1NO22G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01440 ID=NO22G01440|Name=NO22G01440|organism=Nannochloropsis oceanica|type=gene|length=780bp
ATGGGAAAGGAGAAGACCCACGTGAACCTGGTCGTGATTGGCCACGTCGA
TGCCGGCAAGTCTACCACCACGGGCCACCTCATCTATAAGTGCGGCGGCA
TCGACAAGCGTGTGATCGAGAAGTTCGAGAAAGAGGCGGCCGAGATGGGC
AAGTCTTCTTTCAAGTACGCGTGGGTGCTGGACAAGCTCAAGGCTGAGCG
TGAGCGTGGTATCACCATTGATATCGCCCTCTGGAAGTTCGAGTCTCCCA
AGTACTACTTCACCATTATCGACGCCCCCGGCCACCGTGATTTCATCAAG
AACATGATTACCGGTACCTCCCAGGCTGATGTTGCCATCCTCATCGTCGC
CTCCGGGACGGGAGAGTTCGAGGCGGGCATTGGCAAGGATGGGCAGACCC
GCGAGCACGCCCTGTTGGCGTTTACCTTGGGTGTGAAGCAGATGATTGTG
TGCGTCAACAAAATGGACGACTCGTCTGTCAACTACGGCGAGGCCCGCTT
CAATGAGATCAAGGAGGAGGTGTCCAACTATCTCAAAAAGGTCGGATACA
AGCCCGCCAAGGTCCCCTTCATTCCCATCTCCGGCTGGAATGGCGACAAC
ATGATCGAGAAGTCTACCAACATGGCCTGGTACAAGGGCCCCACTCTCCT
GGAGGCCCTTGACAACATCAACCCCCCAAGCGCCCCACGGACAAGCCCCT
CCGCCTGCCCCTCCAGGACGTGTATAAGATCGGCGGCATTGGAACGGTCC
CCGTCGGCCGTGTGGAGACCGGTGTCCTGA
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protein sequence of NO22G01440.1

>NO22G01440.1-protein ID=NO22G01440.1-protein|Name=NO22G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bp
MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMG
KSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIK
NMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIV
CVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDN
MIEKSTNMAWYKGPTLLEALDNINPPSAPRTSPSACPSRTCIRSAALERS
PSAVWRPVS*
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Synonyms
Publications