jgi.p|Nanoce1779_2|544243, gene_7152 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|544243
Unique Namegene_7152
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:405955..409375 +

Link to JBrowse

Properties
Property NameValue
TranscriptId544329
ProteinId544243
Product nameputative translation elongation factor 1-alpha
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:405955..409375 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01440NO22G01440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|544243mRNA_7152-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|544243mRNA_7152Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|544243

>mRNA_7152-protein ID=mRNA_7152-protein|Name=jgi.p|Nanoce1779_2|544243|organism=Nannochloropsis oceanica|type=polypeptide|length=442bp
MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMG
KSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIK
NMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIV
CVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDN
MIEKSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTV
PVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEAVPGDNVGFNV
KNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLD
CHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPLVV
ESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKAVDVKGKKK*
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Synonyms
Publications