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Properties
| Property Name | Value |
|---|
| TranscriptId | 544329 |
| Track | FilteredModels2 |
| ProteinId | 544243 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:405955..409375 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7152 ID=mRNA_7152|Name=jgi.p|Nanoce1779_2|544243|organism=Nannochloropsis oceanica|type=mRNA|length=3315bp
GGCGGCGTGTGACTCCTCATCTTTAAGTAGTGGTCGCTTTTGCTGCATGC
TTTTGATCACCTCGTGATTGATGGCTGGATTCTCAGCTGTCTTCTGACAT
CTTTGGGTGCATGGGTTGACCGGTGTCGCGGGAGGCAGACCCTGTTCCGT
GGAGGTGTGTGGCTGCGGATGCGGCGACACGGAAGAAGGGCGTGCATCAC
TTCTCTCTTAGTCGATTTACGATGCGCTTCTGCGCACAGCTCATTCACCC
ACCCGCCACCACTCCTCTTGCACATGTATGCAGGTGTCGGGCCAAGTTAG
TCGCGCGCTGAGTGGCCCGAACCCCGCATGTGGTAGTGGAATGCGTGGTC
GGCAGAAGCCTTGAGCACAGCGAAAGAAGAAAACAAGATAAGCAGGGGAT
GGCTGCGGTTTGCGCGTGCCTTTGCCGCGCAGCCCGTCACAACAATACGT
ATCCCTCATGGGAATTACACTCACCTGTTTCGGCGCGCAGGTGGGACATG
CCTCGTTCAGCATGAGACGCAAGGCTTCTCGTTGTTGGGCCGGACGGCGG
CGTGGCTTCTTTGCTGCACTGCCGGCGCTGCACCACCTCGCCCTGCCAGC
CACCGGCCAGGGTCGTGGCATCGATGGGCATCACCCCCACCCCTCAACCC
TCACTTCGTAACAATGGGAAAGGAGAAGACCCACGTGAACCTGGTCGTGA
TTGGCCACGTCGATGCCGGCAAGTCTACCACCACGGGCCACCTCATCTAT
AAGTGCGGCGGCATCGACAAGCGTGTGATCGAGAAGTTCGAGAAAGAGGC
GGCCGAGATGGGCAAGTCTTCTTTCAAGTACGCGTGGGTGCTGGACAAGC
TCAAGGCTGAGCGTGAGCGTGGTATCACCATTGATATCGCCCTCTGGAAG
TTCGAGTCTCCCAAGTACTACTTCACCATTATCGACGCCCCCGGCCACCG
TGATTTCATCAAGAACATGATTACCGGTACCTCCCAGGCTGATGTTGCCA
TCCTCATCGTCGCCTCCGGGACGGGAGAGTTCGAGGCGGGCATTGGCAAG
GATGGGCAGACCCGCGAGCACGCCCTGTTGGCGTTTACCTTGGGTGTGAA
GCAGATGATTGTGTGCGTCAACAAAATGGACGACTCGTCTGTCAACTACG
GCGAGGCCCGCTTCAATGAGATCAAGGAGGAGGTGTCCAACTATCTCAAA
AAGGTCGGATACAAGCCCGCCAAGGTCCCCTTCATTCCCATCTCCGGCTG
GAATGGCGACAACATGATCGAGAAGTCTACCAACATGGCCTGGTACAAGG
GCCCCACTCTCCTGGAGGCCCTTGACAACATCAACCCCCCCAAGCGCCCC
ACGGACAAGCCCCTCCGCCTGCCCCTCCAGGACGTGTATAAGATCGGCGG
CATTGGAACGGTCCCCGTCGGCCGTGTGGAGACCGGTGTCCTGAAGCCTG
GCATGGTTGTGACCATCGCACCCGCCATGGTGACGACTGAAGTTAAGTCC
GTAGAGATGCACCACGAGTCTATGGCTGAGGCCGTCCCTGGTGACAACGT
CGGGTTCAACGTTAAGAACGTGTCGGTCAAGGAGATCCGTCGTGGCTACG
TCGCGGGTGACTCCAAGAAGGACCCCCCCGCCGGTGCTGCCAACTTCGTG
GCGCAGGTCATCGTCATGAACCACCCCGGTCAGATCCAAAACGGCTACTG
CCCAGTGCTTGACTGCCACACCGCGCACGTTGCCTGCAAGTTCGCCGAGA
TCACGGAAAAGATTGACCGACGTACCGGCGCCGTCACGGAAGCCAACCCC
AAGTTTGTCCAGTCGGGGGATGGTTGCTACGTGACCCTCGAGCCCTCCAA
GCCCTTGGTGGTGGAGTCCTTCACTGAGTACCCCCCTCTGGGCCGTTTCG
CCGTGCGTGATATGCGACAGACTGTGGCTGTGGGTGTGGTCAAGAGTGTC
GACAAGAAGGCAGTCGATGTCAAGGGCAAGAAGAAGTAAACGAAGCAGCA
GCAGCAATAGCAGCGGCAGCAGTAGTGATTGGCAGTGGTGGTTTATTTTA
GGCGGTGATAAAAGGATTTGGGAGGATAGAGAGGACAGAGACCAGTGGGA
TATGGGAGAAGGAAATGCCGGAGGGACACAGGGTAGGGACGGGCTTCGCG
GGGGGAATGCGTTTCCGGCTTTTGCCCTACATCGACCACCGCCTTCTTAA
ATGCCTGCTGGTGGGTCAGGGTAATGGTGGTTTAAAACAGCCAGGGCGCT
GATGGAGGCAAAAAGAATGAACCACTCAGTTTAATCAAATATGTTCTAGG
AATGATTTTTCGTTGGACAAGAACATGCGTCCGGCTTTGAATTTGAACAC
GGGAGCGCACGCACTCAGGAACAAAGAAGACAAAGCTAGTGAAGCCGAGT
CGTGAGGATGGGTTTGGGGCAGAGGGTTCAGGAGGAGACTAGGAAAGGAG
GGTGCTCGAAAGGGCCGATCCAGTGCAAGCAGATGAGAAAGACATAACAC
ATTCCTTCGTCGCAAAGGAGATAGGGCACGAAGGAGGGCAAACTAAATCC
GCTCACTAAGTTGTGTTGGTCACAAGATTCTGTTGCTCTGATTGATGGTT
GCAGTATCTCATCGTCCTCGTAGTTTTTCGTAAAGCATAGCTTTTAAGGT
CCGTGAGGCAGGTTTGTGAGAATTAAAAGCCTGCTGGCCTGGGCGAAAAG
ATGTCTCGATGTCCAAAAAATTAGACGTTGCCACATTTCCTTGTTGGCTC
ACTATATCCTTTAAAATGCAGTTGGACCTTATCGCATGCATGTTTTACGT
GCACAAAGAAGCTCAAGGCCTCTGAAGACCCAGGTAGATATTGAAGAAGG
GAGAAATCAAAGCGTACGAAGGCGAACGGCGCGACGGAAGGTTTCTTCGT
CTCGGGCCGTCATAGAAATGTCACCTGTAAGAGAGGCAAGGTTGGATGTC
GACAAGACTGCTTGGAGAGGTGGTGTATTCAGACTTAGACTTAGACTTCG
AGACTTACGAGACCTCGACATAATCAATCCTACCTCTACTCCCGTGCCGT
CCTCTTGGTGATAAAACAAAAGGACAGTTGTTGTGAAGGCGCAAGAATCG
TGGAGCACTTGATTCTAACGCCTTCTCAGATTCACCTCTCTAGTGCATAG
ATTTGTGAGGTCACAACCAAGTGTTTGCCTTTTGTAGAGAACGTGAAGTT
CGCGACAGCTGCTCACTTCAAGGGCATTTTGGAAGTACACGATTACAGAC
GCAAGATGGCGGTTTTCACTTGCAGGCGTGCCAATGCGCTACGTATTGTC
GGTGAAATTGTCTGT back to topprotein sequence of jgi.p|Nanoce1779_2|544243 >mRNA_7152-protein ID=mRNA_7152-protein|Name=jgi.p|Nanoce1779_2|544243|organism=Nannochloropsis oceanica|type=polypeptide|length=442bp
MGKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKFEKEAAEMG
KSSFKYAWVLDKLKAERERGITIDIALWKFESPKYYFTIIDAPGHRDFIK
NMITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIV
CVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDN
MIEKSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTV
PVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEAVPGDNVGFNV
KNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLD
CHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPLVV
ESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKAVDVKGKKK* back to topmRNA from alignment at scaffold_16:405955..409375+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7152 ID=mRNA_7152|Name=jgi.p|Nanoce1779_2|544243|organism=Nannochloropsis oceanica|type=mRNA|length=3421bp|location=Sequence derived from alignment at scaffold_16:405955..409375+ (Nannochloropsis oceanica)
GGCGGCGTGTGACTCCTCATCTTTAAGTAGTGGTCGCTTTTGCTGCATGC
TTTTGATCACCTCGTGATTGATGGCTGGATTCTCAGCTGTCTTCTGACAT
CTTTGGGTGCATGGGTTGACCGGTGTCGCGGGAGGCAGACCCTGTTCCGT
GGAGGTGTGTGGCTGCGGATGCGGCGACACGGAAGAAGGGCGTGCATCAC
TTCTCTCTTAGTCGATTTACGATGCGCTTCTGCGCACAGCTCATTCACCC
ACCCGCCACCACTCCTCTTGCACATGTATGCAGGTGTCGGGCCAAGTTAG
TCGCGCGCTGAGTGGCCCGAACCCCGCATGTGGTAGTGGAATGCGTGGTC
GGCAGAAGCCTTGAGCACAGCGAAAGAAGAAAACAAGATAAGCAGGGGAT
GGCTGCGGTTTGCGCGTGCCTTTGCCGCGCAGCCCGTCACAACAATACGT
ATCCCTCATGGGAATTACACTCACCTGTTTCGGCGCGCAGGTGGGACATG
CCTCGTTCAGCATGAGACGCAAGGCTTCTCGTTGTTGGGCCGGACGGCGG
CGTGGCTTCTTTGCTGCACTGCCGGCGCTGCACCACCTCGCCCTGCCAGC
CACCGGCCAGGGTCGTGGCATCGATGGGCATGTACGCGCCTCACGCACGG
CCCGCGCCGGCATTTTGTTCATAGGACTTTGATAAACACCTCTGGCTCAT
TCTCCCTCTCCTCCTCACCCATCCACCACGAGCACAGCACCCCCACCCCT
CAACCCTCACTTCGTAACAATGGGAAAGGAGAAGACCCACGTGAACCTGG
TCGTGATTGGCCACGTCGATGCCGGCAAGTCTACCACCACGGGCCACCTC
ATCTATAAGTGCGGCGGCATCGACAAGCGTGTGATCGAGAAGTTCGAGAA
AGAGGCGGCCGAGATGGGCAAGTCTTCTTTCAAGTACGCGTGGGTGCTGG
ACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATTGATATCGCCCTC
TGGAAGTTCGAGTCTCCCAAGTACTACTTCACCATTATCGACGCCCCCGG
CCACCGTGATTTCATCAAGAACATGATTACCGGTACCTCCCAGGCTGATG
TTGCCATCCTCATCGTCGCCTCCGGGACGGGAGAGTTCGAGGCGGGCATT
GGCAAGGATGGGCAGACCCGCGAGCACGCCCTGTTGGCGTTTACCTTGGG
TGTGAAGCAGATGATTGTGTGCGTCAACAAAATGGACGACTCGTCTGTCA
ACTACGGCGAGGCCCGCTTCAATGAGATCAAGGAGGAGGTGTCCAACTAT
CTCAAAAAGGTCGGATACAAGCCCGCCAAGGTCCCCTTCATTCCCATCTC
CGGCTGGAATGGCGACAACATGATCGAGAAGTCTACCAACATGGCCTGGT
ACAAGGGCCCCACTCTCCTGGAGGCCCTTGACAACATCAACCCCCCCAAG
CGCCCCACGGACAAGCCCCTCCGCCTGCCCCTCCAGGACGTGTATAAGAT
CGGCGGCATTGGAACGGTCCCCGTCGGCCGTGTGGAGACCGGTGTCCTGA
AGCCTGGCATGGTTGTGACCATCGCACCCGCCATGGTGACGACTGAAGTT
AAGTCCGTAGAGATGCACCACGAGTCTATGGCTGAGGCCGTCCCTGGTGA
CAACGTCGGGTTCAACGTTAAGAACGTGTCGGTCAAGGAGATCCGTCGTG
GCTACGTCGCGGGTGACTCCAAGAAGGACCCCCCCGCCGGTGCTGCCAAC
TTCGTGGCGCAGGTCATCGTCATGAACCACCCCGGTCAGATCCAAAACGG
CTACTGCCCAGTGCTTGACTGCCACACCGCGCACGTTGCCTGCAAGTTCG
CCGAGATCACGGAAAAGATTGACCGACGTACCGGCGCCGTCACGGAAGCC
AACCCCAAGTTTGTCCAGTCGGGGGATGGTTGCTACGTGACCCTCGAGCC
CTCCAAGCCCTTGGTGGTGGAGTCCTTCACTGAGTACCCCCCTCTGGGCC
GTTTCGCCGTGCGTGATATGCGACAGACTGTGGCTGTGGGTGTGGTCAAG
AGTGTCGACAAGAAGGCAGTCGATGTCAAGGGCAAGAAGAAGTAAACGAA
GCAGCAGCAGCAATAGCAGCGGCAGCAGTAGTGATTGGCAGTGGTGGTTT
ATTTTAGGCGGTGATAAAAGGATTTGGGAGGATAGAGAGGACAGAGACCA
GTGGGATATGGGAGAAGGAAATGCCGGAGGGACACAGGGTAGGGACGGGC
TTCGCGGGGGGAATGCGTTTCCGGCTTTTGCCCTACATCGACCACCGCCT
TCTTAAATGCCTGCTGGTGGGTCAGGGTAATGGTGGTTTAAAACAGCCAG
GGCGCTGATGGAGGCAAAAAGAATGAACCACTCAGTTTAATCAAATATGT
TCTAGGAATGATTTTTCGTTGGACAAGAACATGCGTCCGGCTTTGAATTT
GAACACGGGAGCGCACGCACTCAGGAACAAAGAAGACAAAGCTAGTGAAG
CCGAGTCGTGAGGATGGGTTTGGGGCAGAGGGTTCAGGAGGAGACTAGGA
AAGGAGGGTGCTCGAAAGGGCCGATCCAGTGCAAGCAGATGAGAAAGACA
TAACACATTCCTTCGTCGCAAAGGAGATAGGGCACGAAGGAGGGCAAACT
AAATCCGCTCACTAAGTTGTGTTGGTCACAAGATTCTGTTGCTCTGATTG
ATGGTTGCAGTATCTCATCGTCCTCGTAGTTTTTCGTAAAGCATAGCTTT
TAAGGTCCGTGAGGCAGGTTTGTGAGAATTAAAAGCCTGCTGGCCTGGGC
GAAAAGATGTCTCGATGTCCAAAAAATTAGACGTTGCCACATTTCCTTGT
TGGCTCACTATATCCTTTAAAATGCAGTTGGACCTTATCGCATGCATGTT
TTACGTGCACAAAGAAGCTCAAGGCCTCTGAAGACCCAGGTAGATATTGA
AGAAGGGAGAAATCAAAGCGTACGAAGGCGAACGGCGCGACGGAAGGTTT
CTTCGTCTCGGGCCGTCATAGAAATGTCACCTGTAAGAGAGGCAAGGTTG
GATGTCGACAAGACTGCTTGGAGAGGTGGTGTATTCAGACTTAGACTTAG
ACTTCGAGACTTACGAGACCTCGACATAATCAATCCTACCTCTACTCCCG
TGCCGTCCTCTTGGTGATAAAACAAAAGGACAGTTGTTGTGAAGGCGCAA
GAATCGTGGAGCACTTGATTCTAACGCCTTCTCAGATTCACCTCTCTAGT
GCATAGATTTGTGAGGTCACAACCAAGTGTTTGCCTTTTGTAGAGAACGT
GAAGTTCGCGACAGCTGCTCACTTCAAGGGCATTTTGGAAGTACACGATT
ACAGACGCAAGATGGCGGTTTTCACTTGCAGGCGTGCCAATGCGCTACGT
ATTGTCGGTGAAATTGTCTGT back to topCoding sequence (CDS) from alignment at scaffold_16:405955..409375+ >mRNA_7152 ID=mRNA_7152|Name=jgi.p|Nanoce1779_2|544243|organism=Nannochloropsis oceanica|type=CDS|length=1326bp|location=Sequence derived from alignment at scaffold_16:405955..409375+ (Nannochloropsis oceanica)
ATGGGAAAGGAGAAGACCCACGTGAACCTGGTCGTGATTGGCCACGTCGA
TGCCGGCAAGTCTACCACCACGGGCCACCTCATCTATAAGTGCGGCGGCA
TCGACAAGCGTGTGATCGAGAAGTTCGAGAAAGAGGCGGCCGAGATGGGC
AAGTCTTCTTTCAAGTACGCGTGGGTGCTGGACAAGCTCAAGGCTGAGCG
TGAGCGTGGTATCACCATTGATATCGCCCTCTGGAAGTTCGAGTCTCCCA
AGTACTACTTCACCATTATCGACGCCCCCGGCCACCGTGATTTCATCAAG
AACATGATTACCGGTACCTCCCAGGCTGATGTTGCCATCCTCATCGTCGC
CTCCGGGACGGGAGAGTTCGAGGCGGGCATTGGCAAGGATGGGCAGACCC
GCGAGCACGCCCTGTTGGCGTTTACCTTGGGTGTGAAGCAGATGATTGTG
TGCGTCAACAAAATGGACGACTCGTCTGTCAACTACGGCGAGGCCCGCTT
CAATGAGATCAAGGAGGAGGTGTCCAACTATCTCAAAAAGGTCGGATACA
AGCCCGCCAAGGTCCCCTTCATTCCCATCTCCGGCTGGAATGGCGACAAC
ATGATCGAGAAGTCTACCAACATGGCCTGGTACAAGGGCCCCACTCTCCT
GGAGGCCCTTGACAACATCAACCCCCCCAAGCGCCCCACGGACAAGCCCC
TCCGCCTGCCCCTCCAGGACGTGTATAAGATCGGCGGCATTGGAACGGTC
CCCGTCGGCCGTGTGGAGACCGGTGTCCTGAAGCCTGGCATGGTTGTGAC
CATCGCACCCGCCATGGTGACGACTGAAGTTAAGTCCGTAGAGATGCACC
ACGAGTCTATGGCTGAGGCCGTCCCTGGTGACAACGTCGGGTTCAACGTT
AAGAACGTGTCGGTCAAGGAGATCCGTCGTGGCTACGTCGCGGGTGACTC
CAAGAAGGACCCCCCCGCCGGTGCTGCCAACTTCGTGGCGCAGGTCATCG
TCATGAACCACCCCGGTCAGATCCAAAACGGCTACTGCCCAGTGCTTGAC
TGCCACACCGCGCACGTTGCCTGCAAGTTCGCCGAGATCACGGAAAAGAT
TGACCGACGTACCGGCGCCGTCACGGAAGCCAACCCCAAGTTTGTCCAGT
CGGGGGATGGTTGCTACGTGACCCTCGAGCCCTCCAAGCCCTTGGTGGTG
GAGTCCTTCACTGAGTACCCCCCTCTGGGCCGTTTCGCCGTGCGTGATAT
GCGACAGACTGTGGCTGTGGGTGTGGTCAAGAGTGTCGACAAGAAGGCAG
TCGATGTCAAGGGCAAGAAGAAGTAA back to top
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