NO22G00820, NO22G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00820 vs. NCBI_GenBank
Match: EWM21413.1 (ring finger protein 10, partial [Nannochloropsis gaditana]) HSP 1 Score: 109.0 bits (271), Expect = 4.200e-20 Identity = 64/131 (48.85%), Postives = 72/131 (54.96%), Query Frame = 0 Query: 94 FP-PSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLEEEHRVRRCPMCFESICQPDLRPVEAAEVCALPPSLPLPSRKPRSAEGGGACVRPSSLSHASSSKEGEREGGKEEGRLELWLLAREKGTLTPRV 224 FP P LPPCPIC D PRAAQ+T+CGHH+CAPC+LRYLEEE VRRCPMC E I Q DLRP+E A PSLP A ++ LLAR KG+LTPRV Sbjct: 48 FPHPHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLEEEGCVRRCPMCLEHIHQSDLRPLE-----AWSPSLP--------ASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKFLLLARTKGSLTPRV 165
BLAST of NO22G00820 vs. NCBI_GenBank
Match: XP_009821224.1 (hypothetical protein H257_00314 [Aphanomyces astaci] >ETV88824.1 hypothetical protein H257_00314 [Aphanomyces astaci]) HSP 1 Score: 107.1 bits (266), Expect = 1.600e-19 Identity = 85/299 (28.43%), Postives = 123/299 (41.14%), Query Frame = 0 Query: 47 RSKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLE-EEHRVRRCPMCFESICQPDLRPVEAAEVCALPP-SLPLPSRKPRSAEGGGACVRPSSLSHASSSKEGEREGGKEEGRLELWLLAREKGTLTPRVVGGRXXXXXXXXXXXXSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRILPLVSTPHAVFSRLLASSPDHETAALLREEDELNQLRSETVGLGDMEWIPFIDDALARLEKR 344 R+++ FL NFRFV+SPL ALYD D+L +WD ++ V + + + CPICLDT RA ++T+CGH +C CIL YL E+ RRCPMCF+++ + DLR V +P R G P+ + SS+K P+ GG +P V +AVFSR+L S+P + + + E ++L+ L +E GD +P I +ALA EKR Sbjct: 67 RTRDEFLHANFRFVISPLAANESRALYDPDALTEWDKIEQVIVAHDATVDADHRCPICLDTLRAPKITRCGHAYCWHCILTYLSLTENYWRRCPMCFDAVKKHDLRSVLIDRHRTIPSVGSSATFRYVHRGRGSWFPHLPAPQAAPSSTKNHH-----------------------PQQKGG-------------------------------------------------------IPSVHGANAVFSRILESTPSYLESMIQSETEDLDALAAEAKSSGDDHALPVIQEALAYCEKR 287
BLAST of NO22G00820 vs. NCBI_GenBank
Match: XP_008862805.1 (hypothetical protein H310_01471 [Aphanomyces invadans] >ETW09000.1 hypothetical protein H310_01471 [Aphanomyces invadans]) HSP 1 Score: 105.5 bits (262), Expect = 4.600e-19 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 0 Query: 47 RSKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLE-EEHRVRRCPMCFESICQPDLRPV 154 R+++ FL N+RFV+SPL P LYD D+L +WD ++ V + + + CPICLDT RA ++T+CGH +C CIL YL E+ RRCPMCF+S+ + DLR V Sbjct: 67 RTRDEFLHANYRFVISPLSANESPTLYDLDALTEWDKIEQVIVANDATNID-QRCPICLDTLRAPKITRCGHAYCWHCILTYLSMTENYWRRCPMCFDSVKKHDLRSV 173
BLAST of NO22G00820 vs. NCBI_GenBank
Match: XP_009526895.1 (hypothetical protein PHYSODRAFT_315018 [Phytophthora sojae] >EGZ17837.1 hypothetical protein PHYSODRAFT_315018 [Phytophthora sojae]) HSP 1 Score: 100.9 bits (250), Expect = 1.100e-17 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 0 Query: 47 RSKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLEEEHRV-RRCPMCFESICQPDLRPVEAAEVCALPP 164 R++ +L N+RFV++PL P + +D ++L +W V+ V L P CPIC+DT RA ++TKCGH FC PCILRYL + RRCPMCFES+ + LR V+ ++ +PP Sbjct: 68 RTQSEYLHANYRFVIAPLDPDAVVPTWDLEALTEWSSVEQVLLWYDVESPQ--TCPICMDTFRAPKITKCGHIFCWPCILRYLSMTDKYWRRCPMCFESVQKGHLRSVQLQQL-QVPP 182
BLAST of NO22G00820 vs. NCBI_GenBank
Match: XP_024577569.1 (hypothetical protein, variant 2 [Plasmopara halstedii] >CEG41200.1 hypothetical protein, variant 2 [Plasmopara halstedii]) HSP 1 Score: 98.6 bits (244), Expect = 5.600e-17 Identity = 84/314 (26.75%), Postives = 128/314 (40.76%), Query Frame = 0 Query: 47 RSKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLEEEHRV-RRCPMCFESICQPDLRPVEAAEVCALPPSLP-------LPSRKPR---------SAEGGGACVRPSSLSHASSSKEGEREGGKEEGRLELWLLAREKGTLTPRVVGGRXXXXXXXXXXXXSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRILPLVSTPHAVFSRLLASSPDHETAALLREEDELNQLRSETVGLGDMEWIPFIDDALARLEKR 344 R++ +L N+RFV++PL P +D +SL +W V+ V L + P CPIC+D+ R ++TKCGH FC PCILRYL + RRCPMCFES+ + LR V+ ++ +PP + L K R S + C S+ +H+SS E A K T R LP V+ A +SR+L ++P++ LL E L + +E GD++ +PF+++A+ +R Sbjct: 68 RTQIEYLHANYRFVIAPLDPECIVPTWDVESLTEWSLVEQVLLWYDAANPQ--TCPICMDSFRVPKITKCGHIFCWPCILRYLSMTDKYWRRCPMCFESVQKGHLRSVQLQQL-QIPPRVGSDVTFQFLERPKSRIFPQLRVLPSTQLTDDCTESSAFTHSSS---------------EAATFAARKRT-------------------------------------------------------------RKLPNVNDADATYSRILEATPEYLRELLLAEMRVLQSMDAEFQSSGDVDNLPFVNEAMRNTSER 302
BLAST of NO22G00820 vs. NCBI_GenBank
Match: XP_011409066.2 (PREDICTED: RING finger protein 10-like, partial [Amphimedon queenslandica]) HSP 1 Score: 97.8 bits (242), Expect = 9.600e-17 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 48 SKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLE-EEHRVRRCPMCFESICQPDLRPV 154 +KE FLQ N +F++ YD D L++WD ++ V L F +P CPICL P AA++T+CGH +C PCIL YL E + R+CP+C+ESI + DL+ V Sbjct: 124 NKEQFLQANCQFIVREDTVDYSQYTYDPDLLVEWDTIEQVRL----FCSDIPSCPICLHPPTAAKMTRCGHVYCFPCILHYLSLSEKKWRKCPICYESIYKKDLKSV 226
BLAST of NO22G00820 vs. NCBI_GenBank
Match: CDS14039.1 (hypothetical protein LRAMOSA06210 [Lichtheimia ramosa]) HSP 1 Score: 97.4 bits (241), Expect = 1.300e-16 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 0 Query: 48 SKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYL---EEEHRVRRCPMCFESICQPDLRPVE 155 +KE FL NFRF++S H L D D +WD V+ V L +SS CPICL P AA++TKCGH FC PC+L YL E + + R+CP+C+++I + D++PV+ Sbjct: 138 NKERFLNANFRFIVS-ATGEYHVHLADPDCAFEWDTVEQVLLIASS--EEEQACPICLSPPSAARVTKCGHVFCLPCVLHYLALRENKRQWRKCPICWDAIYERDIKPVK 244
BLAST of NO22G00820 vs. NCBI_GenBank
Match: OQS05993.1 (hypothetical protein THRCLA_01935 [Thraustotheca clavata]) HSP 1 Score: 97.4 bits (241), Expect = 1.300e-16 Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 0 Query: 47 RSKEHFLQTNFRFVLSPLVPPS-HPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLE-EEHRVRRCPMCFESICQPDLRPVEAAEVCALP 163 R+++ FL NFRFVL+P+ A YD +SL W+ ++ V + P CPICLD RA ++T+CGH FC CIL YL E+ RRCPMCF+S+ + DLR V ++ LP Sbjct: 72 RTRDEFLHANFRFVLTPMEKEKMQTASYDPESLTQWNNIEQVIVTHEQ-PEVDQRCPICLDALRAPKITRCGHIFCWNCILMYLSLSENYWRRCPMCFDSVKKTDLRSVLVDKMRTLP 188
BLAST of NO22G00820 vs. NCBI_GenBank
Match: XP_009821225.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV88825.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 97.1 bits (240), Expect = 1.600e-16 Identity = 81/290 (27.93%), Postives = 117/290 (40.34%), Query Frame = 0 Query: 56 NFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLE-EEHRVRRCPMCFESICQPDLRPVEAAEVCALPP-SLPLPSRKPRSAEGGGACVRPSSLSHASSSKEGEREGGKEEGRLELWLLAREKGTLTPRVVGGRXXXXXXXXXXXXSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRILPLVSTPHAVFSRLLASSPDHETAALLREEDELNQLRSETVGLGDMEWIPFIDDALARLEKR 344 +FRFV+SPL ALYD D+L +WD ++ V + + + CPICLDT RA ++T+CGH +C CIL YL E+ RRCPMCF+++ + DLR V +P R G P+ + SS+K P+ GG +P V +AVFSR+L S+P + + + E ++L+ L +E GD +P I +ALA EKR Sbjct: 66 SFRFVISPLAANESRALYDPDALTEWDKIEQVIVAHDATVDADHRCPICLDTLRAPKITRCGHAYCWHCILTYLSLTENYWRRCPMCFDAVKKHDLRSVLIDRHRTIPSVGSSATFRYVHRGRGSWFPHLPAPQAAPSSTKNHH-----------------------PQQKGG-------------------------------------------------------IPSVHGANAVFSRILESTPSYLESMIQSETEDLDALAAEAKSSGDDHALPVIQEALAYCEKR 277
BLAST of NO22G00820 vs. NCBI_GenBank
Match: POM58951.1 (Hypothetical protein PHPALM_36337 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 96.3 bits (238), Expect = 2.800e-16 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 47 RSKEHFLQTNFRFVLSPLVPPSHPALYDADSLIDWDYVDLVYLPSSSFPPSLPPCPICLDTPRAAQLTKCGHHFCAPCILRYLEEEHRV-RRCPMCFESI 146 R++ +L N+RFV++PL P + +D ++L +W V+ V + P CPIC+DT RA ++TKCGH FC PCILRYL + RRCPMCFES+ Sbjct: 157 RTQNEYLHANYRFVIAPLEPDTIVPTWDLEALTEWSSVEQVLVWYDVESPQ--TCPICMDTFRAPKITKCGHIFCWPCILRYLSMTDKYWRRCPMCFESV 254 The following BLAST results are available for this feature:
BLAST of NO22G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00820 ID=NO22G00820|Name=NO22G00820|organism=Nannochloropsis oceanica|type=gene|length=3823bpback to top protein sequence of NO22G00820.2 >NO22G00820.2-protein ID=NO22G00820.2-protein|Name=NO22G00820.2|organism=Nannochloropsis oceanica|type=polypeptide|length=482bpback to top protein sequence of NO22G00820.1 >NO22G00820.1-protein ID=NO22G00820.1-protein|Name=NO22G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bpback to top Synonyms
Publications
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