NO21G02670, NO21G02670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G02670 vs. NCBI_GenBank
Match: EWM29462.1 (ubiquitin-conjugating enzyme domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 218.0 bits (554), Expect = 4.400e-53 Identity = 100/149 (67.11%), Postives = 121/149 (81.21%), Query Frame = 0 Query: 145 LRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 LR+WHGVAFIRRA YGRG+FKF+L+LP AYND DTWPR+ FLT P++HP+VHP+TGELD+ +FYP WDP+RH+IVTVLTLLKKIFY+KP D++ GPGKP FNPEAA L + AEYLRRVE CV+ SQE+V+ D S +FTE Sbjct: 29 LRTWHGVAFIRRARYGRGIFKFILTLPLAYNDVDTWPRLHFLT-PVYHPLVHPQTGELDLHTFYPQWDPERHFIVTVLTLLKKIFYLKPSDYDSLI-VGPGKPTPFNPEAARLYVENHAEYLRRVESCVAASQEDVFVARDGSLFQFTE 175
BLAST of NO21G02670 vs. NCBI_GenBank
Match: CBN74520.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 177.2 bits (448), Expect = 8.600e-41 Identity = 96/206 (46.60%), Postives = 119/206 (57.77%), Query Frame = 0 Query: 95 QAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTEVRSPSPS 301 Q +KDY++ +EYK LK+ AP GV+++PS LR W+GV F+RR Y GVFKF + LPP YND TWP +RF T +F+PMV P TGELD+RS +P W P +HY+VT LT LKK+FYMK F P NPEA L + D +L RVE CV SQE VY + S LRFTE P P+ Sbjct: 10 QTLKDYRLTIEYKHLKQNAPGGVFVIPS-------------------VNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRF-TSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSF----------PRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTE---PKPA 182
BLAST of NO21G02670 vs. NCBI_GenBank
Match: OEU21746.1 (UBC-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 165.2 bits (417), Expect = 3.400e-37 Identity = 87/199 (43.72%), Postives = 117/199 (58.79%), Query Frame = 0 Query: 95 QAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 QA++DYK+ +EYK LK AP GVYL+PS LR ++G+ F+RR + G+FKF L+LPP YND + WP + F + +++P VH TGELD++ YP WDP RHY+VTVLT LKKIFY K +F A N +A +L + D Y ++VEECV SQ+NVY ++S FTE Sbjct: 24 QALRDYKVTIEYKHLKSHAPGGVYLIPSMDS-------------------LREFYGIIFVRRGPFTNGIFKFKLTLPPKYNDVNMWPYIVFAS-HVYNPYVHEETGELDVQGAYPTWDPSRHYLVTVLTYLKKIFYSK--NF---------TDAKANLDAKQLAENDLQSYKQKVEECVHESQKNVYVNDENSTAIFTE 191
BLAST of NO21G02670 vs. NCBI_GenBank
Match: XP_002286422.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96063.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 163.7 bits (413), Expect = 9.800e-37 Identity = 85/199 (42.71%), Postives = 115/199 (57.79%), Query Frame = 0 Query: 95 QAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 QA++DYK+ +EYK LK+ P GVYL+PS LR +HGV F+RR + G+FKF L PP YND D P+V F + +++P VHP TGELD++S YP WDP +H++VTVLT +K+IFY+K + G + N EA L K D Y RRV+ECV SQ +V+ +RF+E Sbjct: 33 QAMRDYKLSIEYKHLKQHCPGGVYLVPSSTS-------------------LRLFHGVIFVRRGRFTNGIFKFTLECPPRYNDVDCHPKVVFSSY-VYNPHVHPETGELDLKSAYPQWDPAKHFLVTVLTYVKRIFYIK-----EYVEEGEAEKKYPNQEALRLFKGDGEGYRRRVQECVRESQRSVFLNDPGCTVRFSE 206
BLAST of NO21G02670 vs. NCBI_GenBank
Match: XP_009038250.1 (hypothetical protein AURANDRAFT_28446 [Aureococcus anophagefferens] >EGB07012.1 hypothetical protein AURANDRAFT_28446 [Aureococcus anophagefferens]) HSP 1 Score: 163.3 bits (412), Expect = 1.300e-36 Identity = 87/186 (46.77%), Postives = 108/186 (58.06%), Query Frame = 0 Query: 91 AAMAQAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRS 277 A AQA+KDYK+ VEYK LK+ +P G+Y++PS LR+WHGV F+RR +Y GVFKF + LPP YND WPRV F T ++ P+V +GELD++ YP WDP +HY+VTVLT LKKIFY+K FE G A N AA D E+LR VE CV S Sbjct: 6 ARRAQAIKDYKLTVEYKHLKQNSPGGIYVVPSFAD-------------------LRTWHGVIFVRRGMYASGVFKFRVELPPEYNDVGAWPRV-FFTSRIYSPLVDAESGELDVKFAYPEWDPAKHYVVTVLTFLKKIFYIK-DGFE-------GYEAPKNAAAARAYADDAPEFLREVEACVRAS 163
BLAST of NO21G02670 vs. NCBI_GenBank
Match: GAX13259.1 (hypothetical protein FisN_17Hh196 [Fistulifera solaris]) HSP 1 Score: 160.2 bits (404), Expect = 1.100e-35 Identity = 87/199 (43.72%), Postives = 119/199 (59.80%), Query Frame = 0 Query: 95 QAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 QA++DYK+ +EYK LK AP GVY++PS LR+++G+ F+RR V+ G+FKFVL LP YND D PR+ F + +++P V TGELDI++ YP WDP +HY+VTVLT LKKIFY K S G A N EA +L + + A Y +V+ CVS+SQ++VY +S +FTE Sbjct: 38 QALRDYKVTIEYKHLKSHAPGGVYVIPSLDD-------------------LRTFYGIIFVRRGVFANGIFKFVLRLPLLYNDVDQHPRITFQS-EVYNPYVDEATGELDIKTAYPNWDPSKHYLVTVLTFLKKIFYAK--------SFG---DAQANMEARQLAEENTAVYRAKVDACVSKSQKDVYDNDPESVAKFTE 205
BLAST of NO21G02670 vs. NCBI_GenBank
Match: GAX11895.1 (hypothetical protein FisN_17Lh196 [Fistulifera solaris]) HSP 1 Score: 159.5 bits (402), Expect = 1.900e-35 Identity = 86/199 (43.22%), Postives = 119/199 (59.80%), Query Frame = 0 Query: 95 QAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 QA++DYK+ +EYK LK AP GVY++PS LR+++G+ F+RR V+ G+FKFVL LP YND D PR+ F + +++P + TGELDI++ YP WDP +HY+VTVLT LKKIFY K S G A N EA +L + + A Y +V+ CVS+SQ++VY +S +FTE Sbjct: 38 QALRDYKVTIEYKHLKSHAPGGVYVIPSLDD-------------------LRTFYGIIFVRRGVFANGIFKFVLRLPLLYNDVDQHPRITFQS-EVYNPYIDETTGELDIKTAYPNWDPSKHYLVTVLTFLKKIFYAK--------SFG---DAQANMEARQLAEENMAVYRAKVDACVSKSQKDVYDNDPESVAKFTE 205
BLAST of NO21G02670 vs. NCBI_GenBank
Match: XP_002186382.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65852.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 156.8 bits (395), Expect = 1.200e-34 Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = 0 Query: 95 QAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 QA++DYK+ +EYK LK AP GVYL+P+ LR ++G+ F+RR + G+FKF L+L P YND + PR+ F + +++P VH +GELDI+S YP WDP RHY+VTVLT LKKIFY K FE A N EA EL PAE+ ++V+ CV SQ+ V+ + S +F+E Sbjct: 45 QALRDYKVTIEYKHLKSHAPGGVYLIPALHD-------------------LRHFYGIIFVRRGPFTNGIFKFELTLSPEYNDNNQHPRIAF-SSSVYNPHVHYESGELDIKSAYPRWDPSRHYLVTVLTFLKKIFYAK--SFE---------DAKANAEARELATKYPAEFRQKVDACVLASQKQVFQNDETSTAQFSE 212
BLAST of NO21G02670 vs. NCBI_GenBank
Match: ETI49977.1 (hypothetical protein F443_06371 [Phytophthora parasitica P1569] >ETK89866.1 hypothetical protein L915_06255 [Phytophthora parasitica] >ETL43266.1 hypothetical protein L916_06191 [Phytophthora parasitica] >ETM49610.1 hypothetical protein L914_06186 [Phytophthora parasitica] >ETO78697.1 hypothetical protein F444_06435 [Phytophthora parasitica P1976] >ETP19755.1 hypothetical protein F441_06377 [Phytophthora parasitica CJ01A1] >ETP47678.1 hypothetical protein F442_06416 [Phytophthora parasitica P10297]) HSP 1 Score: 154.5 bits (389), Expect = 6.000e-34 Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = 0 Query: 94 AQAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 +Q +KDY +M+EYK L++ P+G+Y+LPS R W+G FI +Y G+FKF + LP +YN T+PR+ F T +FHP V+ T ELD++ +P WDP+ HY+V VLT LK IFYMK DF P P + N A ++ + DP Y+ +VEECV S NVY S +RFT+ Sbjct: 44 SQTMKDYGLMIEYKHLRQHVPSGIYVLPSFDHS-------------------RIWYGAIFIHAGLYRNGIFKFTIFLPESYNGPGTYPRIVFNT-SIFHPYVYEDTKELDLKPKFPEWDPELHYMVAVLTYLKGIFYMK--DF-------PDLPQVANGVALDMFRHDPENYVNKVEECVDESLTNVYNNEQGSTIRFTK 214
BLAST of NO21G02670 vs. NCBI_GenBank
Match: ETI49978.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK89867.1 hypothetical protein, variant [Phytophthora parasitica] >ETL43267.1 hypothetical protein, variant [Phytophthora parasitica] >ETM49611.1 hypothetical protein, variant [Phytophthora parasitica] >ETO78698.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP19756.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP47679.1 hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 154.5 bits (389), Expect = 6.000e-34 Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = 0 Query: 94 AQAVKDYKIMVEYKWLKRQAPAGVYLLPSXXXXXXXXXXXXXXXXXXXXXFLRSWHGVAFIRRAVYGRGVFKFVLSLPPAYNDRDTWPRVRFLTLPLFHPMVHPRTGELDIRSFYPAWDPDRHYIVTVLTLLKKIFYMKPPDFEPFFSAGPGKPALFNPEAAELMKTDPAEYLRRVEECVSRSQENVYCLTDDSPLRFTE 294 +Q +KDY +M+EYK L++ P+G+Y+LPS R W+G FI +Y G+FKF + LP +YN T+PR+ F T +FHP V+ T ELD++ +P WDP+ HY+V VLT LK IFYMK DF P P + N A ++ + DP Y+ +VEECV S NVY S +RFT+ Sbjct: 9 SQTMKDYGLMIEYKHLRQHVPSGIYVLPSFDHS-------------------RIWYGAIFIHAGLYRNGIFKFTIFLPESYNGPGTYPRIVFNT-SIFHPYVYEDTKELDLKPKFPEWDPELHYMVAVLTYLKGIFYMK--DF-------PDLPQVANGVALDMFRHDPENYVNKVEECVDESLTNVYNNEQGSTIRFTK 179 The following BLAST results are available for this feature:
BLAST of NO21G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G02670 ID=NO21G02670|Name=NO21G02670|organism=Nannochloropsis oceanica|type=gene|length=2972bpback to top protein sequence of NO21G02670.5 >NO21G02670.5-protein ID=NO21G02670.5-protein|Name=NO21G02670.5|organism=Nannochloropsis oceanica|type=polypeptide|length=409bpback to top protein sequence of NO21G02670.4 >NO21G02670.4-protein ID=NO21G02670.4-protein|Name=NO21G02670.4|organism=Nannochloropsis oceanica|type=polypeptide|length=299bpback to top protein sequence of NO21G02670.3 >NO21G02670.3-protein ID=NO21G02670.3-protein|Name=NO21G02670.3|organism=Nannochloropsis oceanica|type=polypeptide|length=299bpback to top protein sequence of NO21G02670.2 >NO21G02670.2-protein ID=NO21G02670.2-protein|Name=NO21G02670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=333bpback to top protein sequence of NO21G02670.1 >NO21G02670.1-protein ID=NO21G02670.1-protein|Name=NO21G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
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