NO21G02150, NO21G02150 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G02150 vs. NCBI_GenBank
Match: EWM22717.1 (light-harvesting protein [Nannochloropsis gaditana]) HSP 1 Score: 377.1 bits (967), Expect = 3.800e-101 Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0
Query: 1 MKISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPGFPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENLSG 221
MK FALAALLPCAA FVAP SS G A RGRT MMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEIN+VG+DLYWLREAELKHCRLGMMAAAGILFVE +GPAPGFP+ KSQMD FW VYAEKPSL+GA+L AIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGAL+NL+G
Sbjct: 1 MKTVFALAALLPCAAGFVAPVAFPTASSAG-KAVRGRTTMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINEVGIDLYWLREAELKHCRLGMMAAAGILFVEAVGPAPGFPSTKSQMDAFWTVYAEKPSLVGAALVAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALQNLNG 219
BLAST of NO21G02150 vs. NCBI_GenBank
Match: XP_005855846.1 (light-harvesting complex I chlorophyll a/b binding protein 1 [Nannochloropsis gaditana CCMP526] >EKU20519.1 light-harvesting complex I chlorophyll a/b binding protein 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 376.7 bits (966), Expect = 4.900e-101 Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0
Query: 1 MKISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPGFPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENLSG 221
MK FALAALLPCAA FVAP SS G A RGRT MMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEIN+VG+DLYWLREAELKHCRLGMMAAAGILFVE +GPAPGFP+ KSQMD FW VYAEKPSL+GA+L AIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGAL+NL+G
Sbjct: 1 MKTVFALAALLPCAAGFVAPVAFPTASSAG-KAMRGRTTMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINEVGIDLYWLREAELKHCRLGMMAAAGILFVEAVGPAPGFPSTKSQMDAFWTVYAEKPSLVGAALVAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALQNLNG 219
BLAST of NO21G02150 vs. NCBI_GenBank
Match: GAX24797.1 (hypothetical protein FisN_18Lh122 [Fistulifera solaris]) HSP 1 Score: 230.3 bits (586), Expect = 5.700e-57 Identity = 123/215 (57.21%), Postives = 153/215 (71.16%), Query Frame = 0
Query: 6 ALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPG--FPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENL 219
AL ALL +A+ APA S +R T + AE+SK+LPFL +PK LDGSMAGD GFDPLGLSE+N VG+DLYWLREAE+KHCRL MMAAAG ++VE GPAPG + K+Q+ FW+ + +P I SL I +LE+I G+ATT GR++G RAPGD+ DPL D AKF+ QL+E+KNGRLAM AAAG ILQG +T +GA+ NL
Sbjct: 347 ALVALLAGSASAFAPAQQS---------SRAATSLQAEKSKALPFLNRPKLLDGSMAGDNGFDPLGLSEVNAVGIDLYWLREAEIKHCRLAMMAAAGFIWVEAFGPAPGCEMASDKNQITAFWQFWDAQPQYIAFSLIFIGLLEMIGGIATTSGRESGQRAPGDFGLDPLKIKGDKAKFEKYQLQEIKNGRLAMWAAAGQILQGCTTGEGAIGNL 552
BLAST of NO21G02150 vs. NCBI_GenBank
Match: CBN78494.1 (Light harvesting complex protein [Ectocarpus siliculosus]) HSP 1 Score: 229.9 bits (585), Expect = 7.400e-57 Identity = 119/222 (53.60%), Postives = 160/222 (72.07%), Query Frame = 0
Query: 3 ISFALAALLPCAA---AFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDV-GVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPGFPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENLSG 221
+ F +AA L AA AFVAP++P T ++A+ ++M +RSKSLP L +P LDGSMAGDVGFDPLGLS I + G DLYW+REAELKH R+ M+A G+L+ + G PGFP+G +QM +FW+V+AEKP + A + I E+ISG+AT+ G+++GDRAPGD+ DPL K+P K L+L+E+KNGRLAM AAAGMI+QG++T GA++NL G
Sbjct: 1 MKFEMAATLALAAGSSAFVAPSVPLNTRVASSSASSKTSMMAGDRSKSLPMLPQPPLLDGSMAGDVGFDPLGLSSIAGLAGADLYWMREAELKHGRVAMLATVGVLWCDAFGSLPGFPSGVNQMKLFWEVWAEKPQYVAAGIIFCGIAEIISGIATSLGQESGDRAPGDFGIDPLKLDKNPEKKAKLELQEIKNGRLAMWAAAGMIMQGLTTDGGAMDNLFG 222
BLAST of NO21G02150 vs. NCBI_GenBank
Match: GAX17916.1 (light-harvesting complex I chlorophyll a/b binding protein 1 [Fistulifera solaris]) HSP 1 Score: 228.4 bits (581), Expect = 2.200e-56 Identity = 122/215 (56.74%), Postives = 152/215 (70.70%), Query Frame = 0
Query: 6 ALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPG--FPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENL 219
AL ALL +A+ PA S +R T + AE+SK+LPFL +PK LDGSMAGD GFDPLGLSE+N VG+DLYWLREAE+KHCRL MMAAAG ++VE GPAPG + K+Q+ FW+ + +P I SL I +LE+I G+ATT GR++G RAPGD+ DPL D AKF+ QL+E+KNGRLAM AAAG ILQG +T +GA+ NL
Sbjct: 5 ALLALLAGSASAFTPAQQS---------SRAATSLQAEKSKALPFLNRPKLLDGSMAGDNGFDPLGLSEVNAVGIDLYWLREAEIKHCRLAMMAAAGFIWVEAFGPAPGCEMASDKNQITAFWQFWDAQPQYIAFSLIFIGLLEMIGGIATTSGRESGQRAPGDFGLDPLKIKGDKAKFEKYQLQEIKNGRLAMWAAAGQILQGCTTGEGAIGNL 210
BLAST of NO21G02150 vs. NCBI_GenBank
Match: OEU14130.1 (chlorophyll a/b-binding protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 224.6 bits (571), Expect = 3.100e-55 Identity = 122/221 (55.20%), Postives = 155/221 (70.14%), Query Frame = 0
Query: 1 MKISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPG--FPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGK-DPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENL 219
M S A+ +LL +A+ APA SS+ T + AERS SLPF+ +P LDGSMAGDVGFDPLGLS+I+ VGVDLYWLREAE+KH R+ M+A AG+L VE+ GPAPG K+QMD FW+++ P I ASL I +E SG+A T GR++G+RAPGD+ DPLGFGK +PAKF L+ +E+ NGRLAM AAAG+I+QG++T GA NL
Sbjct: 2 MMKSAAIISLLSASASAFAPASTQQQSSSVT--------LNAERSASLPFMNRPALLDGSMAGDVGFDPLGLSDIDGVGVDLYWLREAEVKHARVAMLAVAGVLQVELFGPAPGCEMATAKNQMDAFWQLWNAHPQYIAASLIFITFIEAFSGIAATSGRESGERAPGDFGLDPLGFGKGEPAKFDRLKAQEIANGRLAMWAAAGIIVQGMTTDAGATGNL 214
BLAST of NO21G02150 vs. NCBI_GenBank
Match: XP_002183608.1 (protein fucoxanthin chlorophyll a/c protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44790.1 protein fucoxanthin chlorophyll a/c protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 221.1 bits (562), Expect = 3.400e-54 Identity = 119/221 (53.85%), Postives = 148/221 (66.97%), Query Frame = 0
Query: 1 MKISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPG--FPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENLS 220
MK + A L A+AF APA + R T + AERSKSLPF+ +P LDGSMAGDVGFDPLGLS I VGVDLYWLREAE+KHCR+ MMA AG+L+VE+ GPAPG KSQ D FW+++ P I ++E+I+G+A T GR++G RAPGD+ DPL +PAK++ L EVKNGRLAM AAAG ++Q +TH+GA ENLS
Sbjct: 2 MKFAVLTATLAASASAF-APA---------QSNTRVVTSLNAERSKSLPFMNRPDLLDGSMAGDVGFDPLGLSTIEGVGVDLYWLREAEIKHCRVAMMAVAGVLWVELFGPAPGCEMATAKSQTDAFWQLWQAHPQYIAFGFIMTGLVEMITGIAITTGRESGQRAPGDFGLDPLKIKNNPAKWEKYSLNEVKNGRLAMFAAAGQLMQSWTTHEGAFENLS 212
BLAST of NO21G02150 vs. NCBI_GenBank
Match: CEM01851.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 214.2 bits (544), Expect = 4.200e-52 Identity = 120/234 (51.28%), Postives = 155/234 (66.24%), Query Frame = 0
Query: 3 ISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRT---------VMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEIN-----DVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPGFP-AGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKD--PAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENLS 220
IS +A L C A A +PS T ++ + R+ + E S +LPFL +P LDGS+ GDVGFDP+G S ++ + G+D YW REAE+KH R+ M+A AGILFVE++G P FP KSQMDVFW VY +KP+LI S+ IA++E+ SG A T GR++G R PGD+ FDPLGF K+ P K + KEVKNGRLAM+AAAGMILQG++TH+G LENLS
Sbjct: 5 ISLVVATL--CLAHHAAAFVPSPLLKTSSSQPQQRSSSRLTPQMLQLKGEASTALPFLRRPPALDGSLPGDVGFDPVGFSSLDKNSDGNPGLDFYWFREAEIKHGRIAMLATAGILFVELVGTMPFFPYPNKSQMDVFWDVYRDKPALIFFSIIMIAVMEITSGFAITAGRESGLREPGDFKFDPLGFAKNKSPEAMKTMATKEVKNGRLAMLAAAGMILQGLATHKGCLENLS 236
BLAST of NO21G02150 vs. NCBI_GenBank
Match: XP_002289005.1 (member of fucoxanthin chlorophyll a/c family, lhca clade [Thalassiosira pseudonana CCMP1335] >EED94441.1 member of fucoxanthin chlorophyll a/c family, lhca clade [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 212.6 bits (540), Expect = 1.200e-51 Identity = 117/221 (52.94%), Postives = 149/221 (67.42%), Query Frame = 0
Query: 1 MKISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPG--FPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGF-GKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENL 219
MKI+ + LL +A PA SV SS + AE+S+++PFL KP LDGSMAGD GFDPLGLS I+DVG+DLYWLREAE+KH R+ M+A AG L VE+ GPAPG K Q D FW++++ P I ASL I I+E +SG+A T GR++GDRAPGD+ DPLGF D AK L+L+E++NGRLAM AA G+++QG + H G LE L
Sbjct: 2 MKIT--VLTLLAGSAYSFCPAANSVRSS----------ALNAEKSQAMPFLNKPALLDGSMAGDKGFDPLGLSTIDDVGIDLYWLREAEIKHARVAMLAVAGALQVEVFGPAPGCEMATAKCQTDAFWQIWSAHPQYIAASLVLITIVEAVSGIAATTGRESGDRAPGDFGLDPLGFCNGDVAKADRLKLQEIENGRLAMWAAMGLLVQGSTNHMGGLEAL 210
BLAST of NO21G02150 vs. NCBI_GenBank
Match: XP_002288517.1 (fucoxanthin chl a/c light-harvesting protein [Thalassiosira pseudonana CCMP1335] >EED93953.1 fucoxanthin chl a/c light-harvesting protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 176.4 bits (446), Expect = 9.700e-41 Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 0
Query: 57 LDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAAAGILFVEILGPAPGFPA--GKSQMDVFWKVYAEKPSLIGASLAAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALENL 219
LD SM G GFDPLGLS I+DVG+DLYWLREAE+KH R+ M+A AG ++VE GPAPG A K+QMD FW+++ P I ASL I I E +SG++TT GR++G+R PG + F F K A K +Q KE++NGRLAM AA G+I QG + H G LE L
Sbjct: 47 LDPSMPGYKGFDPLGLSNIDDVGIDLYWLREAEIKHARVAMLAVAGAVWVEAFGPAPGCEAATAKNQMDAFWQIWNSHPQYIAASLVFIMIAEAVSGISTTTGRESGEREPGFFGFGS-NFPKTDADMKKMQDKELENGRLAMWAAMGLIFQGSANHMGGLEAL 209 The following BLAST results are available for this feature:
BLAST of NO21G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G02150 ID=NO21G02150|Name=NO21G02150|organism=Nannochloropsis oceanica|type=gene|length=1642bpback to top protein sequence of NO21G02150.1 >NO21G02150.1-protein ID=NO21G02150.1-protein|Name=NO21G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
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