jgi.p|Nanoce1779_2|546360, gene_8185 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|546360
Unique Namegene_8185
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:367051..369327 +

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Properties
Property NameValue
TranscriptId546446
ProteinId546360
Product namemember of fucoxanthin chlorophyll a/c family, lhca clade
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:367051..369327 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G02150NO21G02150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546360mRNA_8185-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546360mRNA_8185Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|546360

>mRNA_8185-protein ID=mRNA_8185-protein|Name=jgi.p|Nanoce1779_2|546360|organism=Nannochloropsis oceanica|type=polypeptide|length=248bp
MKISFALAALLPCAAAFVAPAIPSVTSSTGTAAARGRTVMMAERSKSLPF
LMKPKNLDGSMAGDVGFDPLGLSEINDVGVDLYWLREAELKHCRLGMMAA
AGILFVEILGPAPGFPAGKSQMDVFWKVYAEKPSLIGASLAAIAILEVIS
GVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAA
AGMILQASPPTQGPLRTEVVKTICDLFVLLKNYMKTTDFSFNENTVS*
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Synonyms
Publications