NO21G01050, NO21G01050 (gene) Nannochloropsis oceanica

Overview
NameNO21G01050
Unique NameNO21G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1213
Alignment locationchr21:331683..332895 +

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Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:331683..332895 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO21G01050 vs. NCBI_GenBank
Match: EWM22604.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 404.4 bits (1038), Expect = 2.800e-109
Identity = 213/275 (77.45%), Postives = 236/275 (85.82%), Query Frame = 0
Query:    4 QQRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
            QQRF GKVV+VTGGGAGIG  IC+RFH EGAKV+IVD N   A+A AAAL   Q D  G E   A RAV AIVDISQE  VSA +DQ+  TDGRLDVLVNNAARFVLKSAE A E DWD V+ SN+KGYGL SKHAIRVMKAT  +GS++EASGCSI+NLGSISSFVGQ GMCTYSATKAA+LALTRCTAIDCGPYGIRVNA+CPGPILTEATK+HA SQGK+M++MVSELTGHMIQHRMG P+E+AA VAFMAS DA+F++GASLLVDGGYSAL
Sbjct:    3 QQRFEGKVVLVTGGGAGIGTGICKRFHAEGAKVWIVDTNREGAEAAAAAL--NQVDN-GKE--HARRAVTAIVDISQETAVSALLDQIEVTDGRLDVLVNNAARFVLKSAEMAEERDWDNVLASNVKGYGLVSKHAIRVMKATKTRGSSTEASGCSIINLGSISSFVGQPGMCTYSATKAAVLALTRCTAIDCGPYGIRVNAVCPGPILTEATKRHAASQGKSMEEMVSELTGHMIQHRMGTPAEIAAVVAFMASEDASFVSGASLLVDGGYSAL 272          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: XP_005645179.1 (short-chain dehydrogenase/reductase SDR [Coccomyxa subellipsoidea C-169] >EIE20635.1 short-chain dehydrogenase/reductase SDR [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 209.5 bits (532), Expect = 1.300e-50
Identity = 123/274 (44.89%), Postives = 163/274 (59.49%), Query Frame = 0
Query:    5 QRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
            +  RG + +VTG G GIG AI ER   EG  V   DV+  AA   AA            +           VD+S+E  V+  +        R+D+ VNNAARFV   A   TE DW+  +G+N+KGY    KHA   M   MA+GS       +IVN+ S S+FV Q     YS TK A+L LTRC+A+D GP+GIRVNA+CPGPILT+ T +HA S  K+ +++ +E+T  +I  RMG P EVA+AVAF+AS +A+FITG +L+VDGG +AL
Sbjct:    2 KNLRGMIAIVTGAGNGIGKAIAERLVDEGCGVMWADVDGEAAQQAAAYCPPNCLQGFPCK-----------VDMSKEKEVANLIQATLMRFSRVDIFVNNAARFVFGHASEVTEEDWERALGTNVKGYAWGIKHASLAM---MAQGSG------AIVNVASTSAFVAQPSFVPYSTTKGAVLQLTRCSALDLGPHGIRVNAVCPGPILTDGTARHAASVSKSTEELCNEMTAPLILKRMGKPDEVASAVAFLASDEASFITGTTLIVDGGLTAL 255          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: OGB95370.1 (short-chain dehydrogenase [candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22])

HSP 1 Score: 194.1 bits (492), Expect = 5.700e-46
Identity = 117/272 (43.01%), Postives = 157/272 (57.72%), Query Frame = 0
Query:    6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
            R +GKV +VTGG AGIG A    F  EGAKV I DV+E A   T A +             Q   A+    DIS+E       D+     GRL +LVNNAA F+LK  E + + DW   +G N+ G  L S++A   +K          A G +IVNLGSISSF+ Q     YSATKAA++ +TR  A+D  P+ IRVN +CPG ILT+A  +H +  G  +++ ++E     +  R+G P EVA A+ F+AS +A+FITGA L+VDGGY+A
Sbjct:    4 RLKGKVAIVTGGAAGIGEATAVLFAEEGAKVVIADVDEAAGMETVARIR-----------AQGGEAIFVSTDISREGDARKACDEAVRAFGRLHILVNNAANFMLKGLEASID-DWHRSLGVNVIGTALISRYAAEAIK---------NAGGGAIVNLGSISSFIAQPSFVAYSATKAALVQMTRNMAMDLAPFNIRVNCVCPGTILTQAVHRHVERVGMTLEEFLTEERPKYLLSRIGEPREVAYAILFLASNEASFITGAHLMVDGGYTA 254          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: OGA31783.1 (short-chain dehydrogenase [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b])

HSP 1 Score: 193.7 bits (491), Expect = 7.400e-46
Identity = 117/272 (43.01%), Postives = 157/272 (57.72%), Query Frame = 0
Query:    6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
            R +GKV +VTGG AGIG A    F  EGAKV I DV+E A   T A +             Q   A+    DIS+E       D+     GRL +LVNNAA F+LK  E + + DW   +G N+ G  L S++A   +K          A G +IVNLGSISSF+ Q     YSATKAA++ +TR  A+D  P+ IRVN +CPG ILT+A  +H +  G  +++ ++E     +  R+G P EVA A+ F+AS +A+FITGA L+VDGGY+A
Sbjct:    4 RLKGKVAIVTGGAAGIGEATAVLFAEEGAKVVIADVDEAAGMETVARIR-----------AQGGEAIFVSTDISREGDARKACDEAVRAFGRLHILVNNAANFMLKGLEASID-DWHRSLGVNVIGTALISRYAAEAIK---------NAGGGAIVNLGSISSFIAQPSFVAYSATKAALVQMTRNMAMDLAPFNIRVNCVCPGTILTQAVHRHVERVGVTLEEFLTEERPKYLLSRIGEPREVAYAILFLASNEASFITGAHLMVDGGYTA 254          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: XP_001745564.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ89535.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 189.1 bits (479), Expect = 1.800e-44
Identity = 120/274 (43.80%), Postives = 163/274 (59.49%), Query Frame = 0
Query:    1 MTQQQRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGG 275
            M+   RF+G   +VTGGGAGIGAAI +R  +EGA+V +VD++   A ATA AL      A G E      AV+A VD+SQ    +A + +     G+LDVLVNNAA F  +S   +T+ DW+ +   N+ GY  A K A   ++AT            S+VNL S+SSFV Q  M  Y+ATK AI  LTRC A D  P  +RVNA+ PG I T A+ +H +  G  +++   + +     +RMG P EVA+AVAF+AS DA+FITG  +++DGG
Sbjct:    1 MSALARFQGLATLVTGGGAGIGAAIAQRLASEGARVCVVDLHADTAAATAKAL-----QAAGVE------AVSAQVDMSQPDGPAAAVHECVQAFGQLDVLVNNAAGFHFESLANSTDADWERLFRLNVMGYSNAIKAAQPHLEATQG----------SVVNLASVSSFVAQPDMFIYNATKGAIAQLTRCLAWDFAPKQVRVNAVAPGAIFTPASVRHMERLGMTIEEGKKDFSSASPMNRMGQPEEVASAVAFLASKDASFITGEIIVIDGG 253          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: WP_012599608.1 (3-oxoacyl-ACP reductase [Cyanothece sp. PCC 7424] >ACK74103.1 short-chain dehydrogenase/reductase SDR (plasmid) [Cyanothece sp. PCC 7424])

HSP 1 Score: 186.4 bits (472), Expect = 1.200e-43
Identity = 106/272 (38.97%), Postives = 155/272 (56.99%), Query Frame = 0
Query:    6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
            R   K+ ++TGGG+GIGAA  + F ++GA V + D++E+   A    +     +A+             + DISQE  V  +++ V  T G +D+LVNNAA FV  + E  +  DWD ++  N+KGY   +K+A  +M+         +  G SIVNLGSISS + Q     Y+ +K AIL +TRC A D  P  IRVN +CPG I T A  + A S+    ++ + +     +  R+G P EVA A+ F+AS +A+FITG SL+VDGGY+A
Sbjct:    2 RLANKIALITGGGSGIGAATAKLFASQGASVALADIDEQGGQAVVTEIRQSLGEAL-----------FHLCDISQEQQVKQWIETVAQTWGGVDILVNNAATFVFGNVEEVSGEDWDKILSVNVKGYAFCAKYAAPLMR---------QRGGGSIVNLGSISSVIAQKSFVPYNTSKGAILQMTRCLAYDLAPDNIRVNCVCPGTIDTPAIWRDAGSKNLTQEEFIEQAAQQHLLGRIGQPIEVAHAILFLASSEASFITGTSLMVDGGYTA 253          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: WP_076338269.1 (SDR family NAD(P)-dependent oxidoreductase [Paenibacillus sp. FSL H8-0548] >OMF26520.1 hypothetical protein BK133_20410 [Paenibacillus sp. FSL H8-0548])

HSP 1 Score: 182.6 bits (462), Expect = 1.700e-42
Identity = 113/271 (41.70%), Postives = 157/271 (57.93%), Query Frame = 0
Query:    8 RGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
            +GK+ +VTGG  G+G AI  R   EG  V++ D NE   +          A  I +  G   + V   +DIS++  V A   Q+      L +LVNNAA FV K  E   E DWD ++  N+KG  L +   + ++K         +A G SI+NL S+S FVGQA   TY+ATK A+  LT+C A+D   +GIRVNA+CPG I TEA ++     GK++D+    ++   I  R G PSEVA+A AF+AS DA+FITG+ LLVDGG++A+
Sbjct:    5 KGKIALVTGGAQGLGEAIVRRLSEEGCTVWLGDRNEAGREV---------ASQITSVTGNPVKYVQ--IDISKKQQVEALAQQMTDAGDGLHILVNNAASFVFKGVEAECE-DWDTILDVNLKGTSLLTGAMVPLLK---------QAQGASIINLSSVSGFVGQAQFATYNATKFALRGLTKCWAVDLASHGIRVNALCPGYIRTEAFEQSCRLLGKDIDEEDRRVSALHILGRQGVPSEVASAAAFLASDDASFITGSDLLVDGGFTAI 254          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: OLB05531.1 (short-chain dehydrogenase [Gemmatimonadetes bacterium 13_2_20CM_69_27] >OLB48815.1 short-chain dehydrogenase [Gemmatimonadetes bacterium 13_2_20CM_2_69_23] >OLD60061.1 short-chain dehydrogenase [Gemmatimonadetes bacterium 13_1_20CM_69_28])

HSP 1 Score: 181.0 bits (458), Expect = 5.000e-42
Identity = 110/273 (40.29%), Postives = 161/273 (58.97%), Query Frame = 0
Query:    6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
            R  GK  +VTGGGAGIG A  + F  EG +V + DV+E+A + +AA++   +            RA+    D+S+E  V    D      G++DVLVN+AA FVLK  + + E +W   +  N+ G  L  ++A   MK  + +G        +IVNL SIS+F+ Q    TYSATKAAI+ +TR  A+D  P+GIRVN +CP  ILT A+ +H +  G+++ + V+E     +  R+G P EVA  + F+AS +A+FITG  L+VDGGY+A+
Sbjct:    2 RMTGKTAIVTGGGAGIGEATVQLFAEEGGQVLVADVDEQAGETSAASVRASRG-----------RAIFVKTDVSKEEDVRRMRDACVREFGKIDVLVNSAATFVLKGVDASVE-EWRRSLDVNVIGTCLCVRYAAEEMK-KLGRG--------AIVNLSSISAFIAQPNFTTYSATKAAIVQMTRNMALDLAPHGIRVNCVCPATILTSASHRHMERVGQSLAEFVAEQGPLHLLRRVGQPREVAYPILFLASDEASFITGTHLMVDGGYTAV 253          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: XP_013903596.1 (short-chain dehydrogenase/reductase SDR [Monoraphidium neglectum] >KIZ04577.1 short-chain dehydrogenase/reductase SDR [Monoraphidium neglectum])

HSP 1 Score: 180.3 bits (456), Expect = 8.500e-42
Identity = 99/172 (57.56%), Postives = 120/172 (69.77%), Query Frame = 0
Query:  107 RFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
            RFV  SA   TE D D+   +N+KGY    KHA R +K       A+   G SIVNL SISSF+ Q G   YSA+K AIL LTRC A+D G +GIRVNA+CPGPILTEAT+KHA SQGK  D +++E+ G +I  RMG+P EVA AVAF+ S DA+FITGA L+VDGG +AL
Sbjct:    9 RFVFSSALDVTEADLDLSFATNVKGYTFCIKHAGRAIK-------AAGRGGGSIVNLASISSFIAQPGFVPYSASKGAILQLTRCCALDLGQHGIRVNAVCPGPILTEATEKHAHSQGKAPDQIMNEMKGGLIIQRMGSPDEVAGAVAFLLSSDASFITGAVLMVDGGMTAL 173          
BLAST of NO21G01050 vs. NCBI_GenBank
Match: WP_041973229.1 (SDR family NAD(P)-dependent oxidoreductase [Pyrinomonas methylaliphatogenes] >CDM64186.1 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like [Pyrinomonas methylaliphatogenes])

HSP 1 Score: 178.7 bits (452), Expect = 2.500e-41
Identity = 110/273 (40.29%), Postives = 154/273 (56.41%), Query Frame = 0
Query:    5 QRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
            +R  GKV ++TGG +GIG A    F  EGA+V I DVNE A    AA +           +G+  +A+    D++QEA      ++  +  G+LD+LVN+AA F  +     +  +W   +  N+ G  L S+HA   MK            G +IVNLGSISSFV Q     YSATKAAI+ +TR  A+D  P+ IRVN +CPG ILT A+  +    G N++  ++  +   +  R+G P EVA A+ F+AS +A+FITG  LLVDGGY+A
Sbjct:    3 ERLSGKVAIITGGASGIGRATAILFAEEGARVVIADVNETAGARVAAEI-----------EGRGGKALFVPTDVAQEADARRACERTLSVYGQLDILVNSAAIFSFRGLT-TSVAEWQRSLSVNVIGTALMSRHAAEAMK----------NRGGAIVNLGSISSFVAQPSFIPYSATKAAIVQMTRNMAMDLAPFNIRVNCVCPGTILTPASDDYVKQAGMNLEQYIAAESEKTLLKRVGQPREVACAILFLASDEASFITGTYLLVDGGYTA 253          
The following BLAST results are available for this feature:
BLAST of NO21G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22604.12.800e-10977.45short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005645179.11.300e-5044.89short-chain dehydrogenase/reductase SDR [Coccomyxa... [more]
OGB95370.15.700e-4643.01short-chain dehydrogenase [candidate division NC10... [more]
OGA31783.17.400e-4643.01short-chain dehydrogenase [Betaproteobacteria bact... [more]
XP_001745564.11.800e-4443.80hypothetical protein [Monosiga brevicollis MX1] >E... [more]
WP_012599608.11.200e-4338.973-oxoacyl-ACP reductase [Cyanothece sp. PCC 7424] ... [more]
WP_076338269.11.700e-4241.70SDR family NAD(P)-dependent oxidoreductase [Paenib... [more]
OLB05531.15.000e-4240.29short-chain dehydrogenase [Gemmatimonadetes bacter... [more]
XP_013903596.18.500e-4257.56short-chain dehydrogenase/reductase SDR [Monoraphi... [more]
WP_041973229.12.500e-4140.29SDR family NAD(P)-dependent oxidoreductase [Pyrino... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004675NSK004675Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01050.1NO21G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602366gene_8061Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100126g17gene7831Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01050.1NO21G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01050 ID=NO21G01050|Name=NO21G01050|organism=Nannochloropsis oceanica|type=gene|length=1213bp
ATGACCCAGCAGCAGCGTTTCAGGGGCAAGGTGGTGGTTGTAACAGgtac
ttttgtttttttacgttttcctgccctgtccgtcttcgcgcgctccgtcc
acacatgcctttaccgcaatcccaacccctaccaactccgacagGCGGCG
GCGCCGGCATCGGGGCAGCCATCTGCGAGCGGTTTCATACTGAAGGTGCC
AAGGTCTATATCGTGGACGTGAACGAGAGAGCTGCCGATGCCACGGCAGC
GGCACTCACCGACAAGCAAGCCGACGCAATTGGAGCAGAGGACGGGCAAG
CCCCAAGAGCAGTGGCAGCAATCGTGGACATCTCCCAAGAGGCCCTTGTG
AGTGCTTTCATGGACCAAGTGCATGCCACGGACGGACGACTAGATGTACT
GGTGAACAATGCCGCGCGGTTTGTACTCAAGAGgcaagtagctttgctca
tactttctcctttatttacagaacttttcacactggcccccctccctcct
ttctccccctcctttaattcattcagTGCGGAGGGGGCAACCGAGACGGA
TTGGGACGTGGTGATGGGAAGTAATATAAAAGGGTATGGCCTGGCTTCAA
AACACGCGATTCGGGTGATGAAGGCGACTATGGCCAAGGGGAGTGCCAGC
GAAGCTTgtaggtatttgttttgcttttggtcgaggaggattatacggaa
ggcgtatggaaagggtgcatctacgttcgcttattctccctctctccgtc
tttgcctttactcagCCGGGTGCTCGATCGTGAATCTTGGCTCCATTTCG
TCGTTTGTGGGACAGGCAGGCATGTGTACTTATAGCGCTACCAAAGCCGC
CATTTTAGCCTTGACAAGATGCACAGCAATTGACTGTGGTCCTTATGGGA
TAAGGGTGAACGCGATATGTCCTGGCCCTATTTTGACGGAGGCGACAAAG
AAGCATGCTGATAGCCAGgtaagggaaggaggatgggggaggcgagcggc
cttttgttcttacccgcctccctcctccctctctttaacaactagGGTAA
GAACATGGACGACATGGTTTCTGAGCTGACAGGACATATGATCCAGCATC
GAATGGGAGCACCTTCAGAAGTGGCTGCTGCCGTTGCATTTATGGCCAGT
GTGGATGCCACGTTTATAACAGGGGCCTCCCTTTTGGTGGATGGGGGGTA
TTCTGCTTTGTAG
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protein sequence of NO21G01050.1

>NO21G01050.1-protein ID=NO21G01050.1-protein|Name=NO21G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MTQQQRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATA
AALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDV
LVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKG
SASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYG
IRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVA
AAVAFMASVDATFITGASLLVDGGYSAL*
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Synonyms
Publications