NO21G01050, NO21G01050 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01050 vs. NCBI_GenBank
Match: EWM22604.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 404.4 bits (1038), Expect = 2.800e-109 Identity = 213/275 (77.45%), Postives = 236/275 (85.82%), Query Frame = 0
Query: 4 QQRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
QQRF GKVV+VTGGGAGIG IC+RFH EGAKV+IVD N A+A AAAL Q D G E A RAV AIVDISQE VSA +DQ+ TDGRLDVLVNNAARFVLKSAE A E DWD V+ SN+KGYGL SKHAIRVMKAT +GS++EASGCSI+NLGSISSFVGQ GMCTYSATKAA+LALTRCTAIDCGPYGIRVNA+CPGPILTEATK+HA SQGK+M++MVSELTGHMIQHRMG P+E+AA VAFMAS DA+F++GASLLVDGGYSAL
Sbjct: 3 QQRFEGKVVLVTGGGAGIGTGICKRFHAEGAKVWIVDTNREGAEAAAAAL--NQVDN-GKE--HARRAVTAIVDISQETAVSALLDQIEVTDGRLDVLVNNAARFVLKSAEMAEERDWDNVLASNVKGYGLVSKHAIRVMKATKTRGSSTEASGCSIINLGSISSFVGQPGMCTYSATKAAVLALTRCTAIDCGPYGIRVNAVCPGPILTEATKRHAASQGKSMEEMVSELTGHMIQHRMGTPAEIAAVVAFMASEDASFVSGASLLVDGGYSAL 272
BLAST of NO21G01050 vs. NCBI_GenBank
Match: XP_005645179.1 (short-chain dehydrogenase/reductase SDR [Coccomyxa subellipsoidea C-169] >EIE20635.1 short-chain dehydrogenase/reductase SDR [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 209.5 bits (532), Expect = 1.300e-50 Identity = 123/274 (44.89%), Postives = 163/274 (59.49%), Query Frame = 0
Query: 5 QRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
+ RG + +VTG G GIG AI ER EG V DV+ AA AA + VD+S+E V+ + R+D+ VNNAARFV A TE DW+ +G+N+KGY KHA M MA+GS +IVN+ S S+FV Q YS TK A+L LTRC+A+D GP+GIRVNA+CPGPILT+ T +HA S K+ +++ +E+T +I RMG P EVA+AVAF+AS +A+FITG +L+VDGG +AL
Sbjct: 2 KNLRGMIAIVTGAGNGIGKAIAERLVDEGCGVMWADVDGEAAQQAAAYCPPNCLQGFPCK-----------VDMSKEKEVANLIQATLMRFSRVDIFVNNAARFVFGHASEVTEEDWERALGTNVKGYAWGIKHASLAM---MAQGSG------AIVNVASTSAFVAQPSFVPYSTTKGAVLQLTRCSALDLGPHGIRVNAVCPGPILTDGTARHAASVSKSTEELCNEMTAPLILKRMGKPDEVASAVAFLASDEASFITGTTLIVDGGLTAL 255
BLAST of NO21G01050 vs. NCBI_GenBank
Match: OGB95370.1 (short-chain dehydrogenase [candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22]) HSP 1 Score: 194.1 bits (492), Expect = 5.700e-46 Identity = 117/272 (43.01%), Postives = 157/272 (57.72%), Query Frame = 0
Query: 6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
R +GKV +VTGG AGIG A F EGAKV I DV+E A T A + Q A+ DIS+E D+ GRL +LVNNAA F+LK E + + DW +G N+ G L S++A +K A G +IVNLGSISSF+ Q YSATKAA++ +TR A+D P+ IRVN +CPG ILT+A +H + G +++ ++E + R+G P EVA A+ F+AS +A+FITGA L+VDGGY+A
Sbjct: 4 RLKGKVAIVTGGAAGIGEATAVLFAEEGAKVVIADVDEAAGMETVARIR-----------AQGGEAIFVSTDISREGDARKACDEAVRAFGRLHILVNNAANFMLKGLEASID-DWHRSLGVNVIGTALISRYAAEAIK---------NAGGGAIVNLGSISSFIAQPSFVAYSATKAALVQMTRNMAMDLAPFNIRVNCVCPGTILTQAVHRHVERVGMTLEEFLTEERPKYLLSRIGEPREVAYAILFLASNEASFITGAHLMVDGGYTA 254
BLAST of NO21G01050 vs. NCBI_GenBank
Match: OGA31783.1 (short-chain dehydrogenase [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b]) HSP 1 Score: 193.7 bits (491), Expect = 7.400e-46 Identity = 117/272 (43.01%), Postives = 157/272 (57.72%), Query Frame = 0
Query: 6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
R +GKV +VTGG AGIG A F EGAKV I DV+E A T A + Q A+ DIS+E D+ GRL +LVNNAA F+LK E + + DW +G N+ G L S++A +K A G +IVNLGSISSF+ Q YSATKAA++ +TR A+D P+ IRVN +CPG ILT+A +H + G +++ ++E + R+G P EVA A+ F+AS +A+FITGA L+VDGGY+A
Sbjct: 4 RLKGKVAIVTGGAAGIGEATAVLFAEEGAKVVIADVDEAAGMETVARIR-----------AQGGEAIFVSTDISREGDARKACDEAVRAFGRLHILVNNAANFMLKGLEASID-DWHRSLGVNVIGTALISRYAAEAIK---------NAGGGAIVNLGSISSFIAQPSFVAYSATKAALVQMTRNMAMDLAPFNIRVNCVCPGTILTQAVHRHVERVGVTLEEFLTEERPKYLLSRIGEPREVAYAILFLASNEASFITGAHLMVDGGYTA 254
BLAST of NO21G01050 vs. NCBI_GenBank
Match: XP_001745564.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ89535.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 189.1 bits (479), Expect = 1.800e-44 Identity = 120/274 (43.80%), Postives = 163/274 (59.49%), Query Frame = 0
Query: 1 MTQQQRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGG 275
M+ RF+G +VTGGGAGIGAAI +R +EGA+V +VD++ A ATA AL A G E AV+A VD+SQ +A + + G+LDVLVNNAA F +S +T+ DW+ + N+ GY A K A ++AT S+VNL S+SSFV Q M Y+ATK AI LTRC A D P +RVNA+ PG I T A+ +H + G +++ + + +RMG P EVA+AVAF+AS DA+FITG +++DGG
Sbjct: 1 MSALARFQGLATLVTGGGAGIGAAIAQRLASEGARVCVVDLHADTAAATAKAL-----QAAGVE------AVSAQVDMSQPDGPAAAVHECVQAFGQLDVLVNNAAGFHFESLANSTDADWERLFRLNVMGYSNAIKAAQPHLEATQG----------SVVNLASVSSFVAQPDMFIYNATKGAIAQLTRCLAWDFAPKQVRVNAVAPGAIFTPASVRHMERLGMTIEEGKKDFSSASPMNRMGQPEEVASAVAFLASKDASFITGEIIVIDGG 253
BLAST of NO21G01050 vs. NCBI_GenBank
Match: WP_012599608.1 (3-oxoacyl-ACP reductase [Cyanothece sp. PCC 7424] >ACK74103.1 short-chain dehydrogenase/reductase SDR (plasmid) [Cyanothece sp. PCC 7424]) HSP 1 Score: 186.4 bits (472), Expect = 1.200e-43 Identity = 106/272 (38.97%), Postives = 155/272 (56.99%), Query Frame = 0
Query: 6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
R K+ ++TGGG+GIGAA + F ++GA V + D++E+ A + +A+ + DISQE V +++ V T G +D+LVNNAA FV + E + DWD ++ N+KGY +K+A +M+ + G SIVNLGSISS + Q Y+ +K AIL +TRC A D P IRVN +CPG I T A + A S+ ++ + + + R+G P EVA A+ F+AS +A+FITG SL+VDGGY+A
Sbjct: 2 RLANKIALITGGGSGIGAATAKLFASQGASVALADIDEQGGQAVVTEIRQSLGEAL-----------FHLCDISQEQQVKQWIETVAQTWGGVDILVNNAATFVFGNVEEVSGEDWDKILSVNVKGYAFCAKYAAPLMR---------QRGGGSIVNLGSISSVIAQKSFVPYNTSKGAILQMTRCLAYDLAPDNIRVNCVCPGTIDTPAIWRDAGSKNLTQEEFIEQAAQQHLLGRIGQPIEVAHAILFLASSEASFITGTSLMVDGGYTA 253
BLAST of NO21G01050 vs. NCBI_GenBank
Match: WP_076338269.1 (SDR family NAD(P)-dependent oxidoreductase [Paenibacillus sp. FSL H8-0548] >OMF26520.1 hypothetical protein BK133_20410 [Paenibacillus sp. FSL H8-0548]) HSP 1 Score: 182.6 bits (462), Expect = 1.700e-42 Identity = 113/271 (41.70%), Postives = 157/271 (57.93%), Query Frame = 0
Query: 8 RGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
+GK+ +VTGG G+G AI R EG V++ D NE + A I + G + V +DIS++ V A Q+ L +LVNNAA FV K E E DWD ++ N+KG L + + ++K +A G SI+NL S+S FVGQA TY+ATK A+ LT+C A+D +GIRVNA+CPG I TEA ++ GK++D+ ++ I R G PSEVA+A AF+AS DA+FITG+ LLVDGG++A+
Sbjct: 5 KGKIALVTGGAQGLGEAIVRRLSEEGCTVWLGDRNEAGREV---------ASQITSVTGNPVKYVQ--IDISKKQQVEALAQQMTDAGDGLHILVNNAASFVFKGVEAECE-DWDTILDVNLKGTSLLTGAMVPLLK---------QAQGASIINLSSVSGFVGQAQFATYNATKFALRGLTKCWAVDLASHGIRVNALCPGYIRTEAFEQSCRLLGKDIDEEDRRVSALHILGRQGVPSEVASAAAFLASDDASFITGSDLLVDGGFTAI 254
BLAST of NO21G01050 vs. NCBI_GenBank
Match: OLB05531.1 (short-chain dehydrogenase [Gemmatimonadetes bacterium 13_2_20CM_69_27] >OLB48815.1 short-chain dehydrogenase [Gemmatimonadetes bacterium 13_2_20CM_2_69_23] >OLD60061.1 short-chain dehydrogenase [Gemmatimonadetes bacterium 13_1_20CM_69_28]) HSP 1 Score: 181.0 bits (458), Expect = 5.000e-42 Identity = 110/273 (40.29%), Postives = 161/273 (58.97%), Query Frame = 0
Query: 6 RFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
R GK +VTGGGAGIG A + F EG +V + DV+E+A + +AA++ + RA+ D+S+E V D G++DVLVN+AA FVLK + + E +W + N+ G L ++A MK + +G +IVNL SIS+F+ Q TYSATKAAI+ +TR A+D P+GIRVN +CP ILT A+ +H + G+++ + V+E + R+G P EVA + F+AS +A+FITG L+VDGGY+A+
Sbjct: 2 RMTGKTAIVTGGGAGIGEATVQLFAEEGGQVLVADVDEQAGETSAASVRASRG-----------RAIFVKTDVSKEEDVRRMRDACVREFGKIDVLVNSAATFVLKGVDASVE-EWRRSLDVNVIGTCLCVRYAAEEMK-KLGRG--------AIVNLSSISAFIAQPNFTTYSATKAAIVQMTRNMALDLAPHGIRVNCVCPATILTSASHRHMERVGQSLAEFVAEQGPLHLLRRVGQPREVAYPILFLASDEASFITGTHLMVDGGYTAV 253
BLAST of NO21G01050 vs. NCBI_GenBank
Match: XP_013903596.1 (short-chain dehydrogenase/reductase SDR [Monoraphidium neglectum] >KIZ04577.1 short-chain dehydrogenase/reductase SDR [Monoraphidium neglectum]) HSP 1 Score: 180.3 bits (456), Expect = 8.500e-42 Identity = 99/172 (57.56%), Postives = 120/172 (69.77%), Query Frame = 0
Query: 107 RFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSAL 279
RFV SA TE D D+ +N+KGY KHA R +K A+ G SIVNL SISSF+ Q G YSA+K AIL LTRC A+D G +GIRVNA+CPGPILTEAT+KHA SQGK D +++E+ G +I RMG+P EVA AVAF+ S DA+FITGA L+VDGG +AL
Sbjct: 9 RFVFSSALDVTEADLDLSFATNVKGYTFCIKHAGRAIK-------AAGRGGGSIVNLASISSFIAQPGFVPYSASKGAILQLTRCCALDLGQHGIRVNAVCPGPILTEATEKHAHSQGKAPDQIMNEMKGGLIIQRMGSPDEVAGAVAFLLSSDASFITGAVLMVDGGMTAL 173
BLAST of NO21G01050 vs. NCBI_GenBank
Match: WP_041973229.1 (SDR family NAD(P)-dependent oxidoreductase [Pyrinomonas methylaliphatogenes] >CDM64186.1 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like [Pyrinomonas methylaliphatogenes]) HSP 1 Score: 178.7 bits (452), Expect = 2.500e-41 Identity = 110/273 (40.29%), Postives = 154/273 (56.41%), Query Frame = 0
Query: 5 QRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATAAALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDVLVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKGSASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYGIRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVAAAVAFMASVDATFITGASLLVDGGYSA 278
+R GKV ++TGG +GIG A F EGA+V I DVNE A AA + +G+ +A+ D++QEA ++ + G+LD+LVN+AA F + + +W + N+ G L S+HA MK G +IVNLGSISSFV Q YSATKAAI+ +TR A+D P+ IRVN +CPG ILT A+ + G N++ ++ + + R+G P EVA A+ F+AS +A+FITG LLVDGGY+A
Sbjct: 3 ERLSGKVAIITGGASGIGRATAILFAEEGARVVIADVNETAGARVAAEI-----------EGRGGKALFVPTDVAQEADARRACERTLSVYGQLDILVNSAAIFSFRGLT-TSVAEWQRSLSVNVIGTALMSRHAAEAMK----------NRGGAIVNLGSISSFVAQPSFIPYSATKAAIVQMTRNMAMDLAPFNIRVNCVCPGTILTPASDDYVKQAGMNLEQYIAAESEKTLLKRVGQPREVACAILFLASDEASFITGTYLLVDGGYTA 253 The following BLAST results are available for this feature:
BLAST of NO21G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01050 ID=NO21G01050|Name=NO21G01050|organism=Nannochloropsis oceanica|type=gene|length=1213bpback to top protein sequence of NO21G01050.1 >NO21G01050.1-protein ID=NO21G01050.1-protein|Name=NO21G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bpback to top Synonyms
Publications
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