jgi.p|Nanoce1779_2|602366, gene_8061 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|602366
Unique Namegene_8061
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:61859..63340 +

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Properties
Property NameValue
TranscriptId602452
ProteinId602366
Product nameshort-chain dehydrogenase/reductase SDR
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:61859..63340 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01050NO21G01050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602366mRNA_8061-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602366mRNA_8061Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|602366

>mRNA_8061-protein ID=mRNA_8061-protein|Name=jgi.p|Nanoce1779_2|602366|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MTQQQRFRGKVVVVTGGGAGIGAAICERFHTEGAKVYIVDVNERAADATA
AALTDKQADAIGAEDGQAPRAVAAIVDISQEALVSAFMDQVHATDGRLDV
LVNNAARFVLKSAEGATETDWDVVMGSNIKGYGLASKHAIRVMKATMAKG
SASEASGCSIVNLGSISSFVGQAGMCTYSATKAAILALTRCTAIDCGPYG
IRVNAICPGPILTEATKKHADSQGKNMDDMVSELTGHMIQHRMGAPSEVA
AAVAFMASVDATFITGASLLVDGGYSAL*
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Synonyms
Publications