NO20G00630, NO20G00630 (gene) Nannochloropsis oceanica

Overview
NameNO20G00630
Unique NameNO20G00630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2720
Alignment locationchr20:211381..214100 +

Link to JBrowse

Properties
Property NameValue
DescriptionCarbonate dehydratase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:211381..214100 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004089carbonate dehydratase activity
GO:0008270zinc ion binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036398CA_dom_sf
IPR023561Carbonic_anhydrase_a-class
IPR001148Carbonic_anhydrase_a
Homology
BLAST of NO20G00630 vs. NCBI_GenBank
Match: PCH53506.1 (carbonic anhydrase [Flavobacteriaceae bacterium])

HSP 1 Score: 101.7 bits (252), Expect = 4.300e-18
Identity = 74/220 (33.64%), Postives = 113/220 (51.36%), Query Frame = 0
Query:   69 GPNNWIHINETTTVRCANTPGNQQSPINF--QTVGKFRDIVSLK----KEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFH-NAEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANP-DKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFT 281
            GP NW ++        ++   + QSPIN    T+ K   + ++K    K    +  +GH     V+F       ++ D+    +TI G  YKLLQFH+H  +EHT++  Y P+EVH VH++ +      V+S  F  G ++E FEN      N  P  K    ++ MI+  ++ P + ++++Y GSLTTPPC       V WYV KTP T S EQ+  F+
Sbjct:   65 GPENWKNLCN----GFSDCGESSQSPINIVTSTISKVDTLEAIKFNYGKSGVEIINNGHT----VQFN------ISGDN---YITINGTTYKLLQFHYHTRSEHTIDGDYYPIEVHFVHKNSD--TNYAVVSMLFQEGKSNELFENYL----NKFPSSKGTFKSEKMIDLINLFPINKSYYNYKGSLTTPPC----SEVVNWYVLKTPLTASKEQIELFS 257          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: OFY48581.1 (hypothetical protein A2W85_09750 [Bacteroidetes bacterium GWF2_41_31])

HSP 1 Score: 100.9 bits (250), Expect = 7.300e-18
Identity = 77/224 (34.38%), Postives = 104/224 (46.43%), Query Frame = 0
Query:   89 GNQQSPINFQTVGKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFH-NAEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFRDLPLANNGRISRNVQDV--LEGTTIYS 310
            G  QSPIN         I +L        +S    E  +E    T E V   + G ++TIG   Y+LLQFH+H  +EH V+  Y PLEVH VH++  D D   V+  FF PG  +E F        +   +K        IN   +LP++ +F+HY GSLTTPPC       V WYV K   + S  Q+  F            G +  N +D+  L G T+YS
Sbjct:   61 GQSQSPINIS-----GSIPNLTLPGLDFNYSSTTTE--IENNGHTIEFVC--EAGSELTIGTKTYQLLQFHYHAKSEHQVDGTYYPLEVHFVHRA-SDTD-YAVVGVFFEPGEENELFTEF---LAHFPTEKGTFTDTTEINLSGLLPENKSFYHYSGSLTTPPC----SEVVNWYVLKNEISASATQIAQF-----------EGILKNNYRDIMNLNGRTVYS 255          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: PKP32545.1 (hypothetical protein CVT99_04185 [Bacteroidetes bacterium HGW-Bacteroidetes-16])

HSP 1 Score: 100.9 bits (250), Expect = 7.300e-18
Identity = 77/222 (34.68%), Postives = 101/222 (45.50%), Query Frame = 0
Query:   89 GNQQSPINFQTVGKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFH-NAEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFRDLPLANNGRISRNVQDVLEGTTIYS 310
            G  QSP+N    G   D+         + F+       +E    T E V   + G ++TIG   Y+LLQFH+H  +EH V+  Y PLEVH VH   E      V+  FF PG  +E F        +   +K        IN   +LP++ +F+HY GSLTTPPC       V WYV K   + S  Q+  F        L NN R  +N    L G TIYS
Sbjct:   61 GQSQSPVNIS--GAIPDLTL-----PGLDFNYSSTTTEIENNGHTIEFVC--EAGSELTIGTKTYQLLQFHYHAKSEHQVDGLYHPLEVHFVHN--ESDTAYAVVGVFFEPGEENELFTEF---LAHFPTEKGTYTDTTEINLAGLLPENKSFYHYSGSLTTPPC----SEVVNWYVLKNEISASATQIAQFEGI-----LKNNYRNIKN----LNGRTIYS 255          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: WP_013324880.1 (carbonic anhydrase family protein [Cyanothece sp. PCC 7822] >ADN16842.1 Carbonate dehydratase [Cyanothece sp. PCC 7822])

HSP 1 Score: 100.5 bits (249), Expect = 9.600e-18
Identity = 66/220 (30.00%), Postives = 120/220 (54.55%), Query Frame = 0
Query:   70 PNNWIHINETTTVRCANTPGNQQSPINFQTVGKFRD---IVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFHN-AEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKN-MINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFR 285
            P++W  ++    + C+   G  QSPINF++  + +    + + +     +  +GH  +  + + +G+           ++ IG  DY+L+QFHFH  +EHT+N     +E+HLVH++  ++ +I V+      G        ++K  +  +P++ +    N +INA D +P D ++++Y+GSLTTPPC   EG  V W+VFKTP  +S +Q+  FT  ++
Sbjct:   53 PHHWAALSPDFAI-CSK--GQNQSPINFESGTREKSPNLVFNYQNTPLNIVNNGHTIQ--INYAKGS-----------RVIIGDKDYELMQFHFHTPSEHTINKKVAKMELHLVHKN--EEGEIAVIGILIQQGQEHPL---IKKIWQYISPEQGEKNFANVIINAKDFIPVDQSYYNYIGSLTTPPC--TEG--VNWFVFKTPLKVSPQQIQQFTQIYQ 247          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: WP_034553081.1 (carbonic anhydrase family protein [Carnobacterium funditum])

HSP 1 Score: 100.1 bits (248), Expect = 1.300e-17
Identity = 62/196 (31.63%), Postives = 108/196 (55.10%), Query Frame = 0
Query:   89 GNQQSPINFQTVGKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFHN-AEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYF 284
            G  QSPIN +T         +  ED ++T   +  E  ++  +    +   D  G +  I G  ++L QFH H+ +EHT++  + P+E+H VH++ + +  + V++ FF  GA +E FE +     NAN ++  +A+   +N  ++LP + +++HY+GSLTTPP       +V+WYV + P  +S EQ+  F  Y+
Sbjct:   60 GEMQSPINIETSN-----AEIMNEDGSLTL--NYLEEAIDVVDNGHSIEIED--GGQALIAGRSFELTQFHLHSPSEHTLDGEHFPIELHFVHKAQDGR--LAVIAVFFKEGAGNETFEAILT-DVNAN-EETTVASGLRLNVTELLPSNKSYYHYLGSLTTPPLT----ENVEWYVMENPIEVSAEQIVTFNEYY 238          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: PJB56792.1 (carbonate dehydratase, partial [Bacteroidetes bacterium CG_4_9_14_3_um_filter_41_19])

HSP 1 Score: 100.1 bits (248), Expect = 1.300e-17
Identity = 79/222 (35.59%), Postives = 104/222 (46.85%), Query Frame = 0
Query:   89 GNQQSPINFQTVGKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFH-NAEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFRDLPLANNGRISRNVQDVLEGTTIYS 310
            G  QSPIN    G   D+         + F+       +E    T E V   + G ++TIG   Y+LLQFH+H  +EH V+ +Y  LEVH VH++  D D   V+  FF PG  +E F        +   +K        IN   +LP++ +F+HY GSLTTPPC       V WYV K   + S  Q+  F        L NN R  RN    L G TIYS
Sbjct:   28 GQSQSPINIS--GAIPDLTL-----PGLDFNYSSTTTEIENNGHTIEFVC--EAGSELTIGTKTYQLLQFHYHAKSEHQVDGSYHSLEVHFVHKA-SDTD-YAVVGVFFEPGEENELFTEF---LAHFPTEKGTYTDTTEINLAGLLPENKSFYHYSGSLTTPPC----SEVVNWYVLKNEISASATQIAQFEGI-----LKNNYRDIRN----LNGRTIYS 222          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: PLX70558.1 (hypothetical protein C0602_03335 [Denitrovibrio sp.])

HSP 1 Score: 100.1 bits (248), Expect = 1.300e-17
Identity = 78/240 (32.50%), Postives = 122/240 (50.83%), Query Frame = 0
Query:   45 NACVGADAKSWGCCGKPEDGKERCGPNNWIHINETTTVRCANTPGNQQSPINFQTVGKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFHN-AEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMI--NAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTS 282
            +AC  ++   WG      +G E  GP NW  ++E   V C +  G  QSPIN  T     D++ +  E  + ++      + V        +    D G  +TI G  ++LLQFHFH+ +E+TVN  Y  +E HLVH+S   K ++ V+S      A ++F +       +A PDK  +     I  +  D LP + +++H+ GSLTTPPC   EG  V W+V + P ++S +Q+  FT+
Sbjct:   15 SACFASENVHWG-----YEGHE--GPANWGDLSEDFHV-CKS--GVSQSPINIDT----GDVIKVSMEPISFSYK----TSGVTLVNNGHTLQANYDRGSYITIKGQKFELLQFHFHSPSENTVNSNYFDMEAHLVHKSA--KGELAVVSVLLKGRAENQFLKQFW----SAMPDKSGVTRVLNIKFSVMDFLPTNQSYYHFDGSLTTPPCS--EG--VHWFVLQNPVSVSKKQVEAFTT 226          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: WP_046590951.1 (carbonic anhydrase [Bacillus sp. SA1-12] >KKI88422.1 carbonic anhydrase [Bacillus sp. SA1-12])

HSP 1 Score: 99.8 bits (247), Expect = 1.600e-17
Identity = 74/222 (33.33%), Postives = 106/222 (47.75%), Query Frame = 0
Query:   65 KERCGPNNWIHINETTTVRCANTPGNQQSPINFQTVGKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFHN-AEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFRD 286
            K   GP  W  +++  +  C N  G++QSPIN +    F  IV+ KK +   T   ++  AF     G             +++ G +YKL QFHFH  +EH  N     +E+HLVH+  +   +I VL      G  +E F ++          K ++  K  I+   VLPKD    HY GSLTTPPC T E   V+W +F+ P  +S EQ+  F   F D
Sbjct:   47 KGETGPKYWGELDQANSA-CVN--GSEQSPINIE----FSKIVTEKKSE--NTRIQYEPTAFTLVNNGHTVQANATTESNSISVEGKEYKLAQFHFHTPSEHQFNGQNYDMELHLVHK--DSNGKIAVLGVMIQEGKENEKFASIWDVLPKDETSK-EMTVKEPIDLLGVLPKDQTSIHYNGSLTTPPC-TEE---VKWIIFEQPIEMSKEQIQTFQQIFPD 252          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: WP_053364919.1 (carbonic anhydrase family protein [Bacillus sp. FJAT-27245])

HSP 1 Score: 99.8 bits (247), Expect = 1.600e-17
Identity = 69/228 (30.26%), Postives = 116/228 (50.88%), Query Frame = 0
Query:   65 KERCGPNNWIHINETTTVRCANTPGNQQSPINFQT--VGKFRDIVSLKKEDAAMTFS----GHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFHN-AEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFRD 286
            +++ GP +W  ++ + +   A   GN+QSPIN ++  V   +++ +L+ +    +FS    GH  +A             P+     + + G +YKL+QFHFH  +EH  N  +  +E+HLVHQ+ + K  + VL      G  ++  +++       N  + ++  K  ++   +LP +  F++Y GSLTTPPC T E   V W VF+ P  +S EQL  F   F D
Sbjct:   58 EDKTGPEHWGKLDASYS---ACLRGNEQSPINIESNQVKPSKELENLEIQYEPTSFSVVNNGHTIQA------------NPEAPSNNIVVDGKEYKLVQFHFHTPSEHQFNNQHFDMELHLVHQNADGK--LAVLGVMMKEGKENKALDSIWSVLPK-NETEKEIDVKEPVDLQALLPSNQTFFNYAGSLTTPPC-TEE---VNWIVFEEPIEMSKEQLKKFQDIFPD 263          
BLAST of NO20G00630 vs. NCBI_GenBank
Match: OGB27883.1 (hypothetical protein A3I16_06440 [Burkholderiales bacterium RIFCSPLOWO2_02_FULL_66_35])

HSP 1 Score: 99.8 bits (247), Expect = 1.600e-17
Identity = 74/240 (30.83%), Postives = 116/240 (48.33%), Query Frame = 0
Query:   69 GPNNWIHINETTTVRCANTPGNQQSPINFQTVGKFRD-----IVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGGVDYKLLQFHFHN-AEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGATSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTPPCQTREGASVQWYVFKTPNTLSYEQLYFFTSYF--RDLPL-ANNGRISRNVQ 300
            GP +W  +       CA   G +QSP++    G  +      + + +    ++  +GH  +  +             D G  +T+ G  Y+LLQFHFH+ AE  VN+    +  HLVH++  D+ Q+ V++    PGA ++    +         D+  L    +I+  D+LP+D  ++ ++GSLTTPPC   EG  V W V K P T+S EQL  F   F     P+ A NGR+ R+ Q
Sbjct:  134 GPEHWAEMKPEFGA-CAT--GQRQSPVHIDEAGTLQGPAEPLVFNHQPSGGSVINNGHTIQVDL-------------DGGNTLTVRGSTYRLLQFHFHHPAEEKVNHKGFAMVAHLVHKN--DQGQLAVVAVLIDPGAANDLVHKVWTHMPLDTGDRVPLPA-GLIDMKDLLPQDQRYYQFMGSLTTPPC--TEG--VLWMVLKQPMTVSREQLKLFARLFPMNARPVQALNGRVVRDAQ 350          
The following BLAST results are available for this feature:
BLAST of NO20G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PCH53506.14.300e-1833.64carbonic anhydrase [Flavobacteriaceae bacterium][more]
OFY48581.17.300e-1834.38hypothetical protein A2W85_09750 [Bacteroidetes ba... [more]
PKP32545.17.300e-1834.68hypothetical protein CVT99_04185 [Bacteroidetes ba... [more]
WP_013324880.19.600e-1830.00carbonic anhydrase family protein [Cyanothece sp. ... [more]
WP_034553081.11.300e-1731.63carbonic anhydrase family protein [Carnobacterium ... [more]
PJB56792.11.300e-1735.59carbonate dehydratase, partial [Bacteroidetes bact... [more]
PLX70558.11.300e-1732.50hypothetical protein C0602_03335 [Denitrovibrio sp... [more]
WP_046590951.11.600e-1733.33carbonic anhydrase [Bacillus sp. SA1-12] >KKI88422... [more]
WP_053364919.11.600e-1730.26carbonic anhydrase family protein [Bacillus sp. FJ... [more]
OGB27883.11.600e-1730.83hypothetical protein A3I16_06440 [Burkholderiales ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL024nonsL024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR068ngnoR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002576NSK002576Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00630.1NO20G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594422gene_6278Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100153g3gene8258Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00630.1NO20G00630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00630 ID=NO20G00630|Name=NO20G00630|organism=Nannochloropsis oceanica|type=gene|length=2720bp
GAAGACCTTCATGTCACTTTTATGGCGATGGGGCAATTGCACTTATACAA
TACTCCTGATCTTGCAAGGACTTCATTCCTTCTTCCATGAAAATTGTAGT
TTTTTATTTCTGTTTCGCTTGTACAGTTGTTTGTTTCTTGTGTACTTCGT
CTGGCTGTCCTTGCTGCACGTCTTTGACCCATTGTCCCGTGTCAGCCTCA
CACCTCGTTGCGTGTATTCTTCTTGATAGCTTCATCTCACGCTCCACTCA
CTATCTTTTACTTCGAGCGCCTGTTGAATGCGAGCGGAGCTTTGCCGGGG
TACCCACACCGATCTATACATGGCTTGACAACAGCACACGTCCAGCTAGC
CTGTCCTGTTCTCTCTCTCAACCACACCTTCTTCCTTGTCCCTCTCTGCA
AACACATGCAGACTCAGCCCTAAAACCCGCCTTTAGACAAGATGAAGATC
ACCATGTCCTCCGCCGCCTGCCTGGCCTTGCTGATGGCACCCTTGGCCCT
GGTCCGCGCCGGTACTTCCATGGAAGACCTTGAGAAGATGGAGTCCTGGA
GCTACGTCCCTgtaagtacttactcgcctcgagtaatgaggttggttggt
cgggtttggacgtggtcgtgttcgtgttcattgcgccgatcttgtgtctt
ttccccgcggggggcgcaacgacacagaacaatatcctcctactccacat
agtgcctctcctctttcgtccgtccatcgtatttgttagcatcttgtcac
atgagagtgaggtcttcttcgctctgtttctctccattgcctgtctgtac
atactgctatttacctcccctcatcatgcaacctcatctcacctcccctc
cctccctccctacatctatctccctccctccctccctccctccctccctt
ctttctttccttcctatctttcaccagAACGAGAATTCCAACGCATGTGT
CGGTGCTGATGCGAAGTCCTGGGGATGCTGCGGAAAGCCGGAGGACGGCA
AGGAGCGTTGCGGCCCCAACAACTGGATCCACATCAACGAGACCACCACC
GTCAGGTGTGCCAACACGCCGGGCAATCAGCAGAGgtatgcacatgcacg
catgcatcagcacgccttctattctcgacgtctttttgtctcctttcccc
tcttcccctctcttacttatttcccgtctcctctctctcctcacctttcc
tacacgcaagcgttagctcaccttccttcccttttctccctccccatttc
tcccaccgtcgcactccctgtgtcctccagCCCCATTAACTTCCAGACTG
TCGGCAAATTCCGTGACATCGTGTCTTTGAAGAAGGAGGATGCCGCCATG
ACCTTCTCGGGCCACAAATGCGAGGCCTTTGTGGAGTTCAAAGAAGGGAC
GTGGGAGGTTGTCACCCCCGATGACTGCGGCTTCAAGATGACAATTGGAG
GCGTCGACTACAAGCTCCTGCAGTTCCACTTCCATAACGCCGAGCACACG
GTCAACTATGCCTACATGCCTCTTGAAGTCCACCTAGTGCACCAGAGCGT
CGAGGACAAAGACCAAATCCTCGTCCTGAGTACCTTTTTCGCCCCAGGCG
CGACCTCCGAGTTCTTCGAGAACCTCCAGAAGGGCCAGGAGAACGCCAAC
CCCGACAAGCCCGACCTGGCCACCAAAAACATGATCAACGCCTATGATGT
CCTCCCCAAAGACATGGCATTCTGGCACTACGTCGGATCCCTCACCACCC
CTCCCTGCCAGACCCGCGAGGGAGCCTCGGTCCAGTGgtacgttccctcc
ttccctccctactccttaccccctggtccctttccctgagtcgacaccac
gcaccagtgtataatataataatcctttccattccctcttcctccccccc
tccagGTACGTCTTCAAGACGCCCAACACCCTCTCCTACGAGCAGCTCTA
CTTCTTCACTTCCTACTTCCGTGACCTGCCCCTGGCCAACAACGGCCGTA
TCTCCCGTAATGTCCAGGACGTCTTGGAGGGCACCACCATCTACTCCTTC
CCTTAAACCGTCGGTTGGTCGGAGAAGAAGGAAGGATGGAGGGAAGGAGC
GAAGGAAGGTCAATGTACCGATAGAGTCTTTCTCACTTATCTGAAATAAG
GGAGGAGGAGGACGGGATAATCAAAAGCAATCAGCAGGGCAATTATATAA
TTTGGAGAAAAGCAACATCCAACTGAGCGTCTCCTTGCGTGTGTTTCAGC
CTGTGTCGGATGTCCGGCGCGGGAGTGATGGCGCTTGCTTGTCTTGATTT
GGATGCGTGTGAATGTGCTCTGTGTAGGTGATAGTTCAGGCAGGGGTTAT
ATTTGATAGTGACGCTCTGTGTAAGTGATAGAATTGCAGAGGCTATATAT
GGTGGGGAACGCCGAGAAGTGTATGCGGGATAAGCAGTGGCTGTTGTCTG
TCTCAGATACAGACCATATCCCCTCTCATTTATTTTTTAAACAAGGACCT
TTTTCTCAAAGAAATAGGAGGGGAAAGAAAAGAGTACTGCCTGCTTTAAA
TAAAAAAGTGCAACCCTGTCCTTGGGAAAGAAACTTAGCAAGAGAGAAAG
CGCAAAAAACACATGAACAGCCCTGCGACAAGGACGTGATTTTATCGAGT
CCTTTGAACAAAATGCATTAAAAAAAAAGCCGAGACGCGAACCGAGTAAC
AACCCACCTAATGACAACTT
back to top

protein sequence of NO20G00630.1

>NO20G00630.1-protein ID=NO20G00630.1-protein|Name=NO20G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bp
MKITMSSAACLALLMAPLALVRAGTSMEDLEKMESWSYVPNENSNACVGA
DAKSWGCCGKPEDGKERCGPNNWIHINETTTVRCANTPGNQQSPINFQTV
GKFRDIVSLKKEDAAMTFSGHKCEAFVEFKEGTWEVVTPDDCGFKMTIGG
VDYKLLQFHFHNAEHTVNYAYMPLEVHLVHQSVEDKDQILVLSTFFAPGA
TSEFFENLQKGQENANPDKPDLATKNMINAYDVLPKDMAFWHYVGSLTTP
PCQTREGASVQWYVFKTPNTLSYEQLYFFTSYFRDLPLANNGRISRNVQD
VLEGTTIYSFP*
back to top
Synonyms
The feature 'NO20G00630' has the following synonyms
Synonym
CA5
Publications