NO20G00350, NO20G00350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00350 vs. NCBI_GenBank
Match: XP_005854199.1 (hypothetical protein NGA_0187100, partial [Nannochloropsis gaditana CCMP526] >EKU22163.1 hypothetical protein NGA_0187100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 242.3 bits (617), Expect = 3.400e-60 Identity = 118/153 (77.12%), Postives = 135/153 (88.24%), Query Frame = 0 Query: 1 MTVTVKVIKDSYVRPTTASSSPSVSPSPRVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYE 154 MTV +KVIKDSYVRPTT ++ + S PRVELAGVDVLF RMNLRVVYFFP+ LS H L+SSL++VLDK+PIL GRQRKEG+KTHYIELNGKGVLVRQQLATV GG+KGKGALLDD F+KTH+HSF+HG K+ VN +RESNLI+TLTEVDYE Sbjct: 1 MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGALLDDEFIKTHIHSFVHGNKSAAVNQDRESNLIITLTEVDYE 153
BLAST of NO20G00350 vs. NCBI_GenBank
Match: EWM22196.1 (Transferase [Nannochloropsis gaditana]) HSP 1 Score: 172.9 bits (437), Expect = 2.600e-39 Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 0 Query: 1 MTVTVKVIKDSYVRPTTASSSPSVSPSPRVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKG 112 MTV +KVIKDSYVRPTT ++ + S PRVELAGVDVLF RMNLRVVYFFP+ LS H L+SSL++VLDK+PIL GRQRKEG+KTHYIELNGKGVLVRQQLATV GG+KGKG Sbjct: 1 MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKG 111
BLAST of NO20G00350 vs. NCBI_GenBank
Match: EWM24902.1 (Transferase [Nannochloropsis gaditana]) HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32 Identity = 155/506 (30.63%), Postives = 220/506 (43.48%), Query Frame = 0 Query: 7 VIKDSYVRPTTASSSPSVSPSPRVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGE------------GGW----------------------------GKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQIPPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADAD-LISLAVIVNYRKALEGIGPMYYGNCVGLKRIQVDAPLLPEQPERSVQLEKALPSLTRLALKIRKGVVVNEEAKQGYLDEAHYLQKALADGKIGNMQFGLM 472 +I+ + + P T + P+PRV LAG D ++ ++ +FF L+ LK SLA+ LD +P+LAGR R+ + +I+ G GV V +Q+A V GKG L L + G VN+ L VTLTEV Y L C + C E +EW + G GGG+ GG G I+YA+G+ SH + DG ++A FL AW+ AS P A+ +R L P AR LP P + T + A + RF + V L+F E+E +K AM K G + WVSTSNALAAHLWPI+S L + G EG G ++D L+ ++++VN RK L+ G Y GN V ++ D P +A LT ALKIR +EE + + D HY+Q + G+ G + + M Sbjct: 13 LIRKTLIPPATPAPP---GPAPRVPLAGCDAIYDHFQVKAAFFFNEPLNPTLLKVSLAKALDAYPLLAGRARQGSNRDAWIDCCGSGVQVIEQIARVT----GKGGLHHGDTL-AFMPRLARGGFKTAVNNAASPILTVTLTEVTYGESFSCGPR--------LLSAC-SCRCNGE---DEWEQEAAGTEGAGGGDVERRPPSPSGTPGGTDGENSLRPTFHASSTTPVPASTPAAPNPGPVIQYALGLSCSHSVGDGSTIAHFLGAWSRASTHLPIQPALNNRDLLLD-PGPWGEAR---LPPPAKFREVSTWTKARILWRFAW--QQGGCETVILRFDKSEVEEIKRQAM----KRLHGTEQWVSTSNALAAHLWPIVSALWSRQGES--EG------GRESDGLVPMSIVVNSRKHLKVPG-HYCGNVVSIQ----DVPAC-----------EASEDLTSRALKIRYASACSEE--EAWQDH-HYMQWMHSRGRAGKILYTRM 461
BLAST of NO20G00350 vs. NCBI_GenBank
Match: KRD00082.1 (hypothetical protein ASE41_37025 [Streptomyces sp. Root264]) HSP 1 Score: 87.0 bits (214), Expect = 1.800e-13 Identity = 97/387 (25.06%), Postives = 143/387 (36.95%), Query Frame = 0 Query: 29 RVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGEGGWGKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQIPPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLIS-LAVIVNYRKAL-EGIGPMYYGNCVGLKRIQVDAPLLPEQP 414 R+ L G D+L + +F+ L AL+ SLAR L ++P+LAGR ++ + N GV + E G G + + + GV D L + LT + GGG +GV ++H +ADGGS AFL +W+ +G P+ + DR L + + G+ + ++T L +G +K V +F EL LKA A L G D WVST++AL AHLW +LS L G AD + L +IV + L + + Y+GNCV +DA L E P Sbjct: 41 RIRLTGYDLLTGPWYTPLTFFYRGTLDGAALRDSLARTLRRYPLLAGRLERDADGGLSVLCNDAGVRFTEAFCPDPMREFGHGLRAE-----PVIGKLLREVSAFGVVDRDTPLLKIRLTRM-----------------------------------------------AGGGS---------VLGVLVNHSLADGGSTLAFLESWSREHLGTPWEEPSHDRAALDGLGRLSTDSATLDARAFVGVGRVRHLTTTLRVG-------VNKLATVTTRFGAAELAALKAEAQRTL----PGPDAWVSTNDALTAHLWQVLSEL----------------RGRPADAVEWLGLIVGAQSRLGDALPSSYWGNCVSNSWTSLDAARLRESP 339
BLAST of NO20G00350 vs. NCBI_GenBank
Match: WP_079041583.1 (hypothetical protein [Streptomyces sp. Root264]) HSP 1 Score: 87.0 bits (214), Expect = 1.800e-13 Identity = 97/387 (25.06%), Postives = 143/387 (36.95%), Query Frame = 0 Query: 29 RVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGEGGWGKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQIPPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLIS-LAVIVNYRKAL-EGIGPMYYGNCVGLKRIQVDAPLLPEQP 414 R+ L G D+L + +F+ L AL+ SLAR L ++P+LAGR ++ + N GV + E G G + + + GV D L + LT + GGG +GV ++H +ADGGS AFL +W+ +G P+ + DR L + + G+ + ++T L +G +K V +F EL LKA A L G D WVST++AL AHLW +LS L G AD + L +IV + L + + Y+GNCV +DA L E P Sbjct: 97 RIRLTGYDLLTGPWYTPLTFFYRGTLDGAALRDSLARTLRRYPLLAGRLERDADGGLSVLCNDAGVRFTEAFCPDPMREFGHGLRAE-----PVIGKLLREVSAFGVVDRDTPLLKIRLTRM-----------------------------------------------AGGGS---------VLGVLVNHSLADGGSTLAFLESWSREHLGTPWEEPSHDRAALDGLGRLSTDSATLDARAFVGVGRVRHLTTTLRVG-------VNKLATVTTRFGAAELAALKAEAQRTL----PGPDAWVSTNDALTAHLWQVLSEL----------------RGRPADAVEWLGLIVGAQSRLGDALPSSYWGNCVSNSWTSLDAARLRESP 395
BLAST of NO20G00350 vs. NCBI_GenBank
Match: WP_069773776.1 (hypothetical protein [Streptomyces sp. LUP30]) HSP 1 Score: 86.7 bits (213), Expect = 2.400e-13 Identity = 100/388 (25.77%), Postives = 146/388 (37.63%), Query Frame = 0 Query: 29 RVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGEGGWGKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQI-PPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLIS-LAVIVNYRKAL-EGIGPMYYGNCVGLKRIQVDAPLLPEQP 414 R+ L G D+L + +F+ L AL+ SLAR L ++P+LAGR ++ + N GV + E G G + + + GV L + LT + EGGG +GV ++H +ADGGS AFL +W+ +G P+ + DR L + PA A L + G+ + ++T L +G +K V +F EL LKA A L G D WVST++AL AHLW +LS L G AD + L +IV + L + + Y+GNCV + A L E P Sbjct: 43 RIRLTGYDLLTGPWYTPLTFFYRDTLDGAALRDSLARTLRRYPLLAGRLERDADGGLSVLCNDAGVRFTEAFCPDPMREYGHGLRAE-----PVIGKLLREVSAFGVVGRDTPLLKIRLTRM-----------------------------------------------EGGGS---------VLGVLVNHSLADGGSTLAFLESWSREHLGMPWEEPSHDRAALDALGRPATDPAALRARAF-VGVGRVRHLTTTLRVG-------VNKLATVTTRFGAAELAALKAEAQRTL----PGSDAWVSTNDALTAHLWQVLSEL----------------RGRPADAVEWLGLIVGAQSRLGDALPSSYWGNCVSNSWTSLGAARLRESP 341
BLAST of NO20G00350 vs. NCBI_GenBank
Match: WP_107445387.1 (hypothetical protein [Streptomyces sp. P3] >AVV44119.1 hypothetical protein C6376_24425 [Streptomyces sp. P3]) HSP 1 Score: 85.9 bits (211), Expect = 4.100e-13 Identity = 97/387 (25.06%), Postives = 143/387 (36.95%), Query Frame = 0 Query: 29 RVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGEGGWGKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQIPPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLIS-LAVIVNYRKAL-EGIGPMYYGNCVGLKRIQVDAPLLPEQP 414 R+ L G D+L + +F+ L AL+ SLAR L ++P+LAGR ++ + N GV + E G G + + + GV L + LT + EGGG +GV ++H +ADGGS AFL +W+ +G P+ + DR L + + G+ + ++T L +G +K V +F EL LKA A L G D WVST++AL AHLW +LS L G AD + L +IV + L + + Y+GNCV +DA L E P Sbjct: 43 RIRLTGYDLLTGPWYTPLTFFYRGTLDGAALRDSLARTLRRYPLLAGRLERDADGGLSVLCNDAGVRFTEAFCPDPMREYGHGLRAE-----PVIGKLLREVSAFGVVGRDTPLLKIRLTRM-----------------------------------------------EGGGS---------VLGVLVNHSLADGGSTLAFLESWSREHLGLPWEEPGHDRAALDGLGRLSTDSATLEARAFVGVGRVRHLTTTLRVG-------VNKLATVTTRFGAAELAALKAEAQRTL----PGPDAWVSTNDALTAHLWQVLSEL----------------RGRPADAVEWLGLIVGAQSRLGDALPSSYWGNCVSNSWTSLDAGRLRESP 341
BLAST of NO20G00350 vs. NCBI_GenBank
Match: WP_086882107.1 (hypothetical protein [Streptomyces rhizosphaericus]) HSP 1 Score: 80.1 bits (196), Expect = 2.300e-11 Identity = 103/418 (24.64%), Postives = 150/418 (35.89%), Query Frame = 0 Query: 29 RVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGEGGWGKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQI-PPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLISLAVIVNYRKALEGIGP-MYYGNCVGLKRIQVDAPLLPEQPERSVQLEKALPSLTRLALKIRKGVVVNEEAK 445 RV L+ D+LF + +F+ L AL++SL R L FP+L+GR +K+ + + GV + A+V + G H K + ++ V D V LT + +GGG +G+ ++H + DG S +FL AW+ G + K DRG + + PA L G F+GR L + V +FT EL +K AAM L AG D WVST++AL AHLW +L L P D L +I ++R + P Y+GN V R + A L +P L +A IR G N E + Sbjct: 38 RVRLSVYDMLFSTVYTTRAFFYRETLDGEALRASLVRTLRNFPVLSGRMKKDPDGGLSVLCDDSGVRFVEAQASVPMPDYG-----PRHTAKKGLDRYLSHAMPFWVVDRDTPLFTVKLTHM-----------------------------------------------KGGGS---------ILGLTMNHAVGDGSSYMSFLEAWSHEHRGLGYAKPSHDRGVIDALGAPASDDTHTGGLTGGAHFTVTGRGQKTAFVGRALKGSFGG-VTTVTTRFTAAELTAMKDAAMADL----AGTDRWVSTNDALTAHLWKVLGALRDRP---------------DTSEERLGLIADFRSFVGAAVPDDYWGNAVTNTRPGMTAAELRSRP------------LGEVAAAIRAGYAENTEER 362
BLAST of NO20G00350 vs. NCBI_GenBank
Match: WP_100806513.1 (hypothetical protein [Streptomyces sp. M56] >AUA11970.1 acyltransferase PapA5 [Streptomyces sp. M56]) HSP 1 Score: 78.2 bits (191), Expect = 8.600e-11 Identity = 74/244 (30.33%), Postives = 106/244 (43.44%), Query Frame = 0 Query: 213 VGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQIPPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLISLAVIVNYRK-ALEGIGPMYYGNCVGLKRIQVDAPLLPEQPERSVQLEKALPSLTRLALKIRKGVVVNEEAKQGYLDEAHYLQ 456 +GV ++H +ADG S +FL +W+ G +PK DRG + + +A L T+ FMGR +L+ K V +FT EL +K AAM L AG + WVST++AL AHLW +L L P DA L +I ++R A E + Y+GN V R + A L + SL +A +R G N E + +E +LQ Sbjct: 151 LGVTMNHAVADGSSYMSFLESWSNEHRGLGYPKPNHDRGIIEALGATDDAATGDGGAGGAHLTVTERGQTSAFMGR-ILLGRFGKTTTVTTRFTAVELAAMKDAAMSDL----AGTERWVSTNDALTAHLWKVLGELRDRP---------------DASEERLGLIADFRSFASEAVPNDYWGNAVSNTRPGMTAAELRSR------------SLGDIAAAVRSGYAENSEKR--IREETAFLQ 360
BLAST of NO20G00350 vs. NCBI_GenBank
Match: EXU62708.1 (hypothetical protein Z951_39930 [Streptomyces sp. PRh5]) HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10 Identity = 101/418 (24.16%), Postives = 150/418 (35.89%), Query Frame = 0 Query: 29 RVELAGVDVLFQRMNLRVVYFFPSYLSAHALKSSLARVLDKFPILAGRQRKEGRKTHYIELNGKGVLVRQQLATVAGGEKGKGALLDDHFLKTHVHSFIHGKKNMGVNDERESNLIVTLTEVDYEXXXXXXXXXXXXXXNGLFGGCMATSCYPEAPNEEWHDVSFEAAGEGGGEGGWGKPIRYAVGVCISHDIADGGSVAAFLLAWAMASMGKPFPKAVMDRGPLRQI-PPAIASARLSSLPLPPGLCSMGTVSTALFMGRFLLMAMSSKYDFVKLKFTGKELENLKAAAMLPLVKAKAGDDIWVSTSNALAAHLWPILSPLIATPGGEGREGXXXXXXGADADLISLAVIVNYRKALEGIGP-MYYGNCVGLKRIQVDAPLLPEQPERSVQLEKALPSLTRLALKIRKGVVVNEEAK 445 R+ L+ D+LF + +F+ L AL++SL R L FP+L+GR +K+ + + GV + A V + G H K + ++ V D V LT + +GGG +G+ ++H + DG S +FL AW+ G + K DRG + + A L G F+GR L + V +FT EL +K AAM L AG D WVST++AL AHLW +L L P D+ + L +I ++R + P Y+GN V R + A L +P L +A IR G N E + Sbjct: 25 RIRLSVYDMLFSTVYTTRAFFYRETLDGEALRASLVRTLRNFPVLSGRMKKDPDGGLSVLCDDSGVRFVEAQAPVPMPDYG-----PRHTAKKGLDRYLSHAMPFWVVDRDTPLFTVKLTHM-----------------------------------------------KGGGS---------ILGLTMNHAMGDGSSYMSFLEAWSHEHRGLGYAKPSHDRGVIDALGASASDDTHTGGLTGGAHFTVTGRGQKTAFIGRALRGSFGG-VTTVTTRFTAAELAAMKDAAMADL----AGTDRWVSTNDALTAHLWKVLGALRDRP---------------DSSVERLGLIADFRSFVGAAVPDDYWGNAVTNTRPGMTAAELRSRP------------LGEIAAAIRAGYAENTEER 349 The following BLAST results are available for this feature:
BLAST of NO20G00350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00350 ID=NO20G00350|Name=NO20G00350|organism=Nannochloropsis oceanica|type=gene|length=4294bpback to top protein sequence of NO20G00350.2 >NO20G00350.2-protein ID=NO20G00350.2-protein|Name=NO20G00350.2|organism=Nannochloropsis oceanica|type=polypeptide|length=588bpback to top protein sequence of NO20G00350.1 >NO20G00350.1-protein ID=NO20G00350.1-protein|Name=NO20G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top Synonyms
Publications
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