NO19G00880, NO19G00880 (gene) Nannochloropsis oceanica

Overview
NameNO19G00880
Unique NameNO19G00880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2216
Alignment locationchr19:298005..300220 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal L11 methyltransferase, PrmA
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:298005..300220 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006479protein methylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR025799Arg_MeTrfase
Homology
BLAST of NO19G00880 vs. NCBI_GenBank
Match: EWM23599.1 (Ribosomal L11 methyltransferase, PrmA [Nannochloropsis gaditana])

HSP 1 Score: 548.9 bits (1413), Expect = 1.100e-152
Identity = 269/347 (77.52%), Postives = 308/347 (88.76%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFGNDPA-KPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDVLEGTVSMGRQEENARLYEVEVAFYVVREGLASEYVAHKYQMP 347
            MLTDHRRMFAYHEAI KN+  F+GKTVVDVGTGTGVLAVWSAKAGA RV+AVE+TDMAKMA+VIVA+NGV  IVEVQQGSAEEM+ V+PGSVDIIVSEWMGYFLLRESMLD++VRVREKYLKKEGGHMFPSHATM+W+L+EDERERQVK QEY QA+ DW  F+++TK+FY+LDMAGL++QYEEEQ++YYLLSS+WAELRAEQVV  PV I  LDLK+CTFE+IKGVP+TPF+F+IP +  N    V+VSGFAGWFTTDFFGN P  +PLP PTTLSTAPD+GYTHWGQQVFH+V GLEL PGDV+EGTV++ RQ ENARLY VEVAF V R G+ S+ V HKYQMP
Sbjct:   69 MLTDHRRMFAYHEAIMKNSSVFEGKTVVDVGTGTGVLAVWSAKAGAKRVVAVEYTDMAKMARVIVAQNGVDAIVEVQQGSAEEMEEVEPGSVDIIVSEWMGYFLLRESMLDSLVRVREKYLKKEGGHMFPSHATMYWALIEDERERQVKEQEYQQALEDWQTFSHQTKEFYDLDMAGLTAQYEEEQKEYYLLSSSWAELRAEQVVAEPVVIRRLDLKSCTFEEIKGVPETPFQFVIPPNDNNEP--VYVSGFAGWFTTDFFGNAPGIEPLPHPTTLSTAPDVGYTHWGQQVFHVVVGLELFPGDVVEGTVTLVRQVENARLYHVEVAFQVRRGGVTSKLVRHKYQMP 413          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: CBN76588.1 (unknown [Ectocarpus siliculosus])

HSP 1 Score: 357.8 bits (917), Expect = 3.700e-95
Identity = 189/348 (54.31%), Postives = 242/348 (69.54%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDVLEGTVSMGRQEENARLYEVEVAF-YVVREGL-ASEYVAHKYQMP 347
            MLTDHRRM AY+ AI+ NAE F GK V+DVGTG+G+LA+W+AKAGAS+V AVEFTDMA  A+ +VA+NG+  +VEV Q S E++       VDII+SEWMGYFLLRESMLD++VR R+++L   GG MFPS  TM W LV DE++R  K QEY + + DW++F  ETK+FY +DM  L + YEEEQR YY+LSS WAEL   QV+G P  + + D+ TCT ED++GV +T     + +D         VSGFAGWFT DF G + A P PCP TLST P+ GYTHWGQQVFHL    ++  G  +EGT+++ RQ+EN RLY+V +    V+  G   S  V+ KY MP
Sbjct:   56 MLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEGVVEVIQCSVEDLK--LDAKVDIIISEWMGYFLLRESMLDSLVRARDRWL-VPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKGQVLGEPAVVQTFDMHTCTLEDVQGVDETNVSIPLEED-------ARVSGFAGWFTADFHGTE-ANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVHIKHKNVLPTGEDKSPLVSVKYAMP 392          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: OEU21425.1 (S-adenosyl-L-methionine-dependent methyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 313.5 bits (802), Expect = 8.000e-82
Identity = 168/352 (47.73%), Postives = 221/352 (62.78%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEM------DGVQPGS-------VDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGV----PKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDF------FGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDV--LEGTVSMGRQEENARLYEVEVAF 328
            ML DH RM AYH AI  NA+ FK K V+DVGTG+G+LAVW+A+AGA +V A+E+TDMAK A+ ++  NGV +IV V QG+ EE+      DG++          VDI +SEWMGYFLLRESMLD+++R R+K++K   G MFPSH TM+ + V+DE ER++   EY  +++DW  F   TKQ Y ++M  L S ++ EQ+ YY+ SS W EL A  V+     I  LD+ TCT ED KGV      + F+F +  DR  G     +SG AGWFT DF       G D A  L  PT LST P+MGYTHWGQQVF+   G+ L  G    + G++ M R +ENARLY   + +
Sbjct:    1 MLADHNRMAAYHSAIMGNADVFKDKVVMDVGTGSGILAVWAAQAGARKVYAIEYTDMAKHARQVMKANGVEDIVTVIQGAVEEIVLPIEEDGLECDDPEHPERVVDIFISEWMGYFLLRESMLDSLIRARDKFMKPATGLMFPSHTTMYVAPVQDEEERRMNCNEYAASMSDWQDFQETTKQVYGVEMEILKSDFDREQKDYYMWSSRWRELPAASVLSERKMIKVLDMMTCTIEDSKGVDMGDEASKFEFAVDGDREQGP----ISGIAGWFTADFKSRTDEVGKDSAPKLSDPTILSTGPEMGYTHWGQQVFYFASGIPLMQGQTTNITGSLEMTRTKENARLYNCRIKY 348          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: CBJ29562.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 308.5 bits (789), Expect = 2.600e-80
Identity = 164/325 (50.46%), Postives = 214/325 (65.85%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDVLEGTVSMGRQEENARLYEVEV 326
            ML D RRM AY  ++  N +AF+GKTV+DVG+G+GVLA+++A+AGA +V AVE+TDMAK A+ +V +NG  ++++V QGSAE +    P  VD+IVSEWMGYFLLRESMLD+VV  R+K+L K+ G MFPSHATM W+ V+D  ++  +  +Y  +++ W  F+    Q Y +DM+GL   YEEE    + LSS W EL   QVV  PV +  LDL TC+ ED KG+ KT F F +       +G   V+GFAGWF   F G D   PL  P   STAP  GYTHWGQQVF+L + +       +EGTVSM RQ  N RLY V+V
Sbjct:  176 MLEDDRRMEAYRNSMLLNRDAFEGKTVLDVGSGSGVLAIFAAQAGAKKVYAVEYTDMAKHARTMVEKNGFGDVIQVIQGSAESIQ--LPEKVDVIVSEWMGYFLLRESMLDSVVVARDKWL-KDTGVMFPSHATMVWAPVDDGDQKYRRDTDYQNSLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSEPVTVKELDLHTCSLEDTKGLAKTLFSFPL------RDGAPPVTGFAGWFDVSFRGRDGVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDATVEGTVSMVRQANNPRLYNVKV 491          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: XP_002181483.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46697.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 305.1 bits (780), Expect = 2.800e-79
Identity = 162/342 (47.37%), Postives = 215/342 (62.87%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPK----TPFKFIIPKDRTNGEGRVHVSGFAGWFTTDF-----FGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDV--LEGTVSMGRQEENARLYEVEVAFYVVR 332
            ML DH RM AYH AI  N + F+ K V+D+GTG+G+LAVW+A+AGA +V A+E+TDMAK A+ ++  NGV +IV V Q S E  D V P  VDIIVSEWMGY LLRESMLD+V+R R+K+LKK  G MFPSH TMF + V DE ER+  A +Y  +++DW  F   T Q Y ++M  L  +++ EQ++Y++LSS W EL  E V+  P  I  LD+ TCT +D +G+ K    + F F I  D  N      +SG AGWFT DF      G   A  L  P  LST P+ GYTHWGQQ F+ +  + +  G++  L G + M R +EN+RLY   + +   R
Sbjct:   50 MLADHNRMAAYHSAILGNQDVFRDKVVMDIGTGSGILAVWAAQAGARKVYAIEYTDMAKHAERVMKANGVDHIVTVIQSSVE--DVVLPRCVDIIVSEWMGYMLLRESMLDSVIRARDKFLKKNTGLMFPSHTTMFVAPVNDEDERKAAANDYGSSMSDWAEFAQTTNQVYGVNMDCLEKEFDREQKEYHMLSSRWTELPPEAVLAEPAMIKQLDMTTCTLQDSRGIDKDAEHSAFDFEIDGDEINNP----ISGIAGWFTADFRSRTDAGGRDAPKLSHPAFLSTGPENGYTHWGQQTFYFLSSIPILKGEITRLTGALEMMRTKENSRLYNCRLTYSTSR 385          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: GAX16444.1 (type I protein arginine methyltransferase [Fistulifera solaris])

HSP 1 Score: 285.0 bits (728), Expect = 3.000e-73
Identity = 151/351 (43.02%), Postives = 214/351 (60.97%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAE-------------EMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGV----PKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDF-----FGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDV--LEGTVSMGRQEENARLYEVEVAF 328
            ML+DH+RM AYH AI  N + F+ K V+D+GTG+G+L+VW+A+AGA +V A+E+TDMAK A+ ++  NGV +IV V Q + E             E DG +   VDII+SEWMGY LLRESM+D+V+  R+++LK++ G MFPSH T+  + + DE ER+  A ++  A+ DW+ F   T   Y +DM+ L+  YE EQ++YY+LSS W EL  E V+  P  I   D+ TCT +  KG+    P++ F F I   +  G     VSGF+GWFT DF      G   A  L  P  LST P+ GYTHWGQQ F+ +  +    G+   + G + M R ++N+RLY    ++
Sbjct:   37 MLSDHQRMAAYHSAILGNQDVFRDKVVMDIGTGSGILSVWAAQAGARKVYAIEYTDMAKHAEKVMKANGVDHIVTVLQTAVEDVKLPIESDRLLVEEDGTE-RCVDIIISEWMGYMLLRESMMDSVIHARDRFLKQKTGLMFPSHTTLLLAPITDEEERKHAATDFSNAMADWNDFEQTTNTMYGVDMSILAPDYEREQKEYYMLSSRWTELPPEAVLAEPAVIKRYDMMTCTLQQAKGLFASDPESSFDFEIEGSKVQGP----VSGFSGWFTADFCSRTDHGGVDAPKLHHPAFLSTGPENGYTHWGQQTFYFLSSIPTMKGETTRISGGIEMTRTKDNSRLYNCRFSY 382          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: GAX19450.1 (type I protein arginine methyltransferase [Fistulifera solaris])

HSP 1 Score: 283.9 bits (725), Expect = 6.800e-73
Identity = 151/351 (43.02%), Postives = 213/351 (60.68%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAE-------------EMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGV----PKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDF-----FGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDV--LEGTVSMGRQEENARLYEVEVAF 328
            ML+DH+RM AYH AI  N + F+ K V+D+GTG+G+L+VW+A+AGA +V A+E+TDMAK A+ ++  N V +IV V Q + E             E DG +   VDII+SEWMGY LLRESM+D+V+  R+++LK++ G MFPSH TM  + + DE ER+  A ++  A+ DW+ F   T   Y +DM+ L+  YE EQ++YY+LSS W EL  E V+  P  I   D+ TCT +  KG+    P++ F F I   +  G     VSGF+GWFT DF      G   A  L  P  LST P+ GYTHWGQQ F+ +  +    G+   + G + M R ++N+RLY    ++
Sbjct:   37 MLSDHQRMAAYHSAILGNQDVFRDKVVMDIGTGSGILSVWAAQAGARKVYAIEYTDMAKHAEKVMKANNVDHIVTVLQTAVEDVKLPIESDQLLVEEDGTE-RCVDIIISEWMGYMLLRESMMDSVIHARDRFLKQKTGLMFPSHTTMLLAPITDEEERKHAATDFSNAMADWNDFEQTTNTMYGVDMSILAPDYEREQKEYYMLSSRWTELPPEAVLAEPAVIKRYDMMTCTLQQAKGLFASDPESSFDFEIEGSKVQGP----VSGFSGWFTADFCSRTDHGGVDAPKLHHPAFLSTGPENGYTHWGQQTFYFLSSIPTMKGETTRISGGIEMTRTKDNSRLYNCRFSY 382          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: XP_003080179.1 (Protein arginine N-methyltransferase [Ostreococcus tauri] >CAL54346.1 Protein arginine N-methyltransferase [Ostreococcus tauri] >OUS47560.1 protein arginine N-methyltransferase prote [Ostreococcus tauri])

HSP 1 Score: 283.1 bits (723), Expect = 1.200e-72
Identity = 145/344 (42.15%), Postives = 221/344 (64.24%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFGNDPAKPLPCPTTLSTAPDM-GYTHWGQQVFHLVKGLELNPGDVLEGTVSMGRQEENARLYEVEVAFYVV-REGLASEYVAHK 343
            ML D  RM AY +A+  N E+F+ K V+DVGTG+GVLA+W+A+AGA +V AVE T MA  A+ IVA NG+S++VEV QGS EE+  V P  VD+I+SEWMGYFLLRESM D+V++ R+K++ K GG MFPS A M+ + ++  +   +K QE  +++  W  F  +T + Y +D++ ++ ++EEEQR++YL ++AW+++   Q++  P+ +   DL   T +DI+ +    FK  +   RT   G   V  F GWF   F G+ P  P   P  L+T PD  G THWGQQ FH+   +  + G+++ GT+ M R++EN RLY V + ++   ++G+ +E +  +
Sbjct:   47 MLEDQNRMTAYSDAVRLNPESFRDKVVLDVGTGSGVLAMWAAQAGAKKVYAVEATHMAVQARKIVAANGLSDVVEVIQGSMEEV--VLPEKVDVIISEWMGYFLLRESMFDSVMKARDKWM-KPGGAMFPSRAKMYLAAIKSNKS-GMKYQELQESMNVWDQFVADTNENYGIDLSCMTGEFEEEQREHYLNTAAWSDVHPSQLMSRPITVAEFDLNKATMDDIEQLRNVDFKMKLFPQRTGAPGESRVGAFCGWFDVTFAGS-PENPCENPVVLTTEPDANGATHWGQQSFHMWPEVHASDGEIISGTLDMVRRQENQRLYNVRMNWHQEDKDGVVNEQLGRR 385          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: XP_001418614.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO96907.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 278.5 bits (711), Expect = 2.900e-71
Identity = 147/328 (44.82%), Postives = 209/328 (63.72%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFGNDPAKPLPC--PTTLSTAPDM-GYTHWGQQVFHLVKGLELNPGDVLEGTVSMGRQEENARLYEVEV 326
            ML D  RM AY +A+  N ++F+GK V+DVGTG+GVLA+W+A+AGA +V AVE T MA  A+ IVA NG+S++VEV QGS EE++   P  VD+I+SEWMGYFLLRESM D+V+  R+K++ K GG MFPSHA M+ S ++  +  Q K QE  +++  W  F   T + Y +D++ ++ +YE+EQ+++YL ++AW ++   QV+  P  + S DL TC+ +DIK +    FK  +        G   V  FAGWF   F G   +K  PC  P  L+TAPD  G THWGQQ F++   +  + G  + G   M R++EN RLY V +
Sbjct:   48 MLEDQNRMTAYSDAVRLNPDSFRGKVVLDVGTGSGVLAMWAAQAGAKKVYAVEATHMAVQARKIVAANGLSDVVEVIQGSMEEVE--LPEKVDVIISEWMGYFLLRESMFDSVLCARDKWM-KPGGAMFPSHAKMYLSAIKSNKSGQ-KYQELQESLNVWEDFVRNTHENYGIDLSCMNGEYEDEQKEHYLNTAAWVDIHPSQVMAKPFTLASFDLNTCSMDDIKVLRDVDFKLRLFDGLAGPSGETRVGAFAGWFDVTFAG---SKENPCENPVELTTAPDANGATHWGQQAFYMFPEVYASDGHFISGKFDMVRRKENQRLYSVRM 368          
BLAST of NO19G00880 vs. NCBI_GenBank
Match: PNR38932.1 (hypothetical protein PHYPA_019210 [Physcomitrella patens])

HSP 1 Score: 275.4 bits (703), Expect = 2.400e-70
Identity = 156/334 (46.71%), Postives = 206/334 (61.68%), Query Frame = 0
Query:    1 MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFGNDPAKPLPCPTTLSTAPDM-GYTHWGQQVFHLVKGLELNPGDVLEGTVSMGRQEENARLYEVEVAFYVVREG 334
            ML+D  RM AY+++I KNA  FKGKTV+DVGTG+G+LA+WSA+AGA +V AVE TDMA  A+ +VA NG+ NIVEV +GS E++    P  VDII+SEWMGYFL+RESM D+V+  R+K+LK   G M+PSHA M W         + K QEY  A+ DW  FT ET   Y +DM  L+  Y EEQR+Y+L +S W  L   QV+G P  +   D  T T ++   V     +F IP D     G   ++GFAGWF   F G  P+ P      L+TAP +   THWGQQVF L   +    GD+L G + + R ++N RL +V++A  + R G
Sbjct:  170 MLSDRVRMDAYYDSIFKNARHFKGKTVLDVGTGSGILAIWSAQAGARKVYAVEATDMATHARALVAGNGMENIVEVIEGSVEDI--TLPEQVDIIISEWMGYFLVRESMFDSVIYARDKWLKPT-GMMYPSHARM-WLAPMQTSLGERKIQEYQHAMNDWSRFTQETSDQYGVDMRVLNDPYREEQRKYFLQTSVWNSLHPNQVIGAPALVKEFDCLTATLDETASVRS---QFRIPID----SGNAKIAGFAGWFDVHFRG-CPSDPADNEVELTTAPSVDDTTHWGQQVFLLHPPISTRNGDILVGELEITRSKQNHRLMDVKIAHALERRG 491          
The following BLAST results are available for this feature:
BLAST of NO19G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23599.11.100e-15277.52Ribosomal L11 methyltransferase, PrmA [Nannochloro... [more]
CBN76588.13.700e-9554.31unknown [Ectocarpus siliculosus][more]
OEU21425.18.000e-8247.73S-adenosyl-L-methionine-dependent methyltransferas... [more]
CBJ29562.12.600e-8050.46conserved unknown protein [Ectocarpus siliculosus][more]
XP_002181483.12.800e-7947.37predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX16444.13.000e-7343.02type I protein arginine methyltransferase [Fistuli... [more]
GAX19450.16.800e-7343.02type I protein arginine methyltransferase [Fistuli... [more]
XP_003080179.11.200e-7242.15Protein arginine N-methyltransferase [Ostreococcus... [more]
XP_001418614.12.900e-7144.82predicted protein [Ostreococcus lucimarinus CCE990... [more]
PNR38932.12.400e-7046.71hypothetical protein PHYPA_019210 [Physcomitrella ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004419NSK004419Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00880.1NO19G00880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G00880.2NO19G00880.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|531744gene_7479Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100139g13gene6864Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00880.1NO19G00880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G00880.2NO19G00880.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00880 ID=NO19G00880|Name=NO19G00880|organism=Nannochloropsis oceanica|type=gene|length=2216bp
ACACAGAGGCAACCAATGGAGGGAATCACCACCAACGGTGCCAGCTGCTG
CAGAAGCCATAGCAACAATAGCAACAGCAGCAGCGGCGGCGGCGACGACG
ACAGTCATGGGGCCGGAAAGCAGAAGGAAGGCTCGGAGGCAGCAGCATGC
GCGGCAGCAGGCACGGGAGGCAGCAACATGAAGGACGACTCGATCATCAT
GAAGGGGGACGCCGGGGCCAAGGCCAAGGATTTTGCCGAATATTTCTGCT
CCTACGCCTTCTTATATCACCAGgtaagccatgggagcgaggtcaaaatc
ccattcatgcctcccttcctccctccgttccgccagcgagggcgtgtgcc
cccccttatttcctcatcccctctcttcctccctgtagAAACAAATGCTC
ACAGACCACCGGCGGATGTTTGCATATCATGAGGCTATTAGCAAAAACGC
AGAGGCCTTCAAGGGGAAGACCGTGGTGGATGTCGGCACGGGGACGGGTG
TTCTGGCTGTCTGGAGTGCCAAGGCAGGGGCGTCCCGGGTGCTGGCAGTG
GAATTTACGGgtaaatgagggagagaatgagggcaaacttatcctgcagt
gctgactttcgaagtgatcactcttttatctacgtctgtcaagacgttgt
cttgtttctcttgtcagagagtcacgccagcaacgcacagaccttaccca
cccctccctatctctctccctccctccctcccttccttccccctcccctc
agACATGGCTAAAATGGCCAAGGTAATCGTAGCCCGCAACGGCGTGAGCA
ACATCGTGGAAGTTCAGCAGGGCTCGGCGGAGGAGATGGACGGGGTACAG
CCAGGGTCGGTGGACATCATAGTCAGCGAGTGGATGGGATACTTCCTGCT
AAGAGAAAGCATGCTCGACACGGTGGTGCGCGTTCGTGAGAAGTACCTGA
AGAAAGAGGGAGGGCACATGTTTCCGAGCCACGCGACCATGTTCTGGTCC
CTGGTCGAGGACGAACGGGAGCGGCAAGTTAAGGCGCAGGAATACCACCA
AGCCATCACTGACTGGCACGCCTTCACGTACGAAACGAAACAATTCTACG
AGCTCGACATGGCCGGCCTCAGCTCCCAATACGAGGAGGAACAAAGACAG
TACTACCTTCTTTCTAGCGCATGGGCCGAGTTGCGCGCGGAGCAAGTCGT
CGGGACCCCCGTTCCGATCCTTTCGCTCGACCTGAAGACCTGTACATTTG
AAGACATCAAGGGCGTCCCAAAAACGCCATTCAAGTTCATCATTCCGAAA
GACAGGACCAACGGCGAAGGCCGTGTGCATGTCAGTGGCTTTGCCGGGTG
GTTTACCACAGACTTTTTTGGGAACGACCCTGCAAAGCCCTTGCCCTGCC
CGACCACATTAAGCACGGCGCCGGACATGGGATACACGCATTGGGGGCAG
CAGGTGTTTCACCTCGTGAAGGGGTTGGAGTTGAACCCGGGGGACGTACT
GGAGGGGACTGTGAGCATGGGAAGGCAGGAGGAGAACGCCCGGTTGTATG
AGGTGGAGGTGGCGTTTTACGTGGTGAGGGAGGGATTGGCGTCTGAGTAT
GTGGCACACAAGTACCAGATGCCATGAGGTGGGAGGAAGGGAGAATGAGA
GATGGAAGGAGGAAATGTCTGTTTATAGATAGAAAGTAGAGCAGAAAGAG
AGAGAGGGATGGAGAGAGAGCATACATTGCGCGACTGTATCCGTCTCGAA
AAATGAAAAATTTGATGAGCCGGCGGCAATGTCATTGAAAATGAAGAGGA
AGAGGACATTGAGAGGGGGAGGGACGAAGGGTAGAAAGGCAGAGAGAGAC
GGGAAAGAGGAAAAGAAACAGGACTTGCCGACACTGGGAAACATGGAGGA
AAGCCGCACTGTACCAGATCCGACCCGTCCGCTTTGCGTGAGCTCTTCCG
TGCTCGTGTTTGTTTAGATACTGAGTTAGAAGGGGAGAGAGGGAGAAGAT
GGATGAGCACAGCGAGCGAAAGAAAGCAGAAAGAAACCACAGTACCTTGT
CCCTTGATTGTGTGCATGTGCCACTGCCCCCTTTTCTCTACCGACGTGAC
GATAGAAGATGAAGGGGATAAGAAAGGAAAAGACTTATGAGAATTAGATT
ATGATACTTCAAGAAATAGAGCCAGAAGAATGACGACGTCCGTCAGAAGA
AGAAAATAAATGTTAC
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protein sequence of NO19G00880.1

>NO19G00880.1-protein ID=NO19G00880.1-protein|Name=NO19G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MEGITTNGASCCRSHSNNSNSSSGGGDDDSHGAGKQKEGSEAAACAAAGT
GGSNMKDDSIIMKGDAGAKAKDFAEYFCSYAFLYHQKQMLTDHRRMFAYH
EAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVLAVEFTDMAKMAK
VIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWMGYFLLRESMLDT
VVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKAQEYHQAITDWHA
FTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELRAEQVVGTPVPIL
SLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVSGFAGWFTTDFFG
NDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELNPGDVLEGTVSMG
RQEENARLYEVEVAFYVVREGLASEYVAHKYQMP*
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protein sequence of NO19G00880.2

>NO19G00880.2-protein ID=NO19G00880.2-protein|Name=NO19G00880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp
MLTDHRRMFAYHEAISKNAEAFKGKTVVDVGTGTGVLAVWSAKAGASRVL
AVEFTDMAKMAKVIVARNGVSNIVEVQQGSAEEMDGVQPGSVDIIVSEWM
GYFLLRESMLDTVVRVREKYLKKEGGHMFPSHATMFWSLVEDERERQVKA
QEYHQAITDWHAFTYETKQFYELDMAGLSSQYEEEQRQYYLLSSAWAELR
AEQVVGTPVPILSLDLKTCTFEDIKGVPKTPFKFIIPKDRTNGEGRVHVS
GFAGWFTTDFFGNDPAKPLPCPTTLSTAPDMGYTHWGQQVFHLVKGLELN
PGDVLEGTVSMGRQEENARLYEVEVAFYVVREGLASEYVAHKYQMP*
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Synonyms
Publications