NO19G00390, NO19G00390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00390 vs. NCBI_GenBank
Match: EWM23526.1 (hypothetical protein Naga_100940g3 [Nannochloropsis gaditana]) HSP 1 Score: 152.1 bits (383), Expect = 1.100e-33 Identity = 83/129 (64.34%), Postives = 91/129 (70.54%), Query Frame = 0 Query: 1 MARGLFTWGALLLLALFALLSSSHAFFVAAPARTALYSSPSIQPQQ-RQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFLW 129 MAR W LL+ L FF+ + RQQG M+MMGGKVAKFG FSPAV+VAKI+LGE+KLNKVRGKAISLHSQAITEFC FVGAQGKTRNRLIKKAKTNGD+LGFLW Sbjct: 1 MARSPCLWSGLLVALLLXXXXXXXXFFMXXXXXXXXXXXXXXXXXRGRQQGAMSMMGGKVAKFGFFSPAVIVAKIVLGEKKLNKVRGKAISLHSQAITEFCTFVGAQGKTRNRLIKKAKTNGDELGFLW 129
BLAST of NO19G00390 vs. NCBI_GenBank
Match: CBJ33332.1 (proton gradient regulation [Ectocarpus siliculosus]) HSP 1 Score: 114.4 bits (285), Expect = 2.600e-22 Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 0 Query: 12 LLLALFALLSSSHAFFVAAPARTALYSSPSI---------------------------QPQQRQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFLW 129 +L L A +++S A FV APAR L + PS+ +P++ +G + M GKV+KFGIFSPAVV AK++LGE +LNK+RGK I+LHSQ I E+C +VGA K R LI+KAK NGDDLGFL+ Sbjct: 4 ILCILLACVAASQA-FVVAPARAGLSTMPSLREGSFVCSLPSTASLTVAQGGGNVAVSRPRRTSRGELRM--GKVSKFGIFSPAVVAAKVILGESRLNKIRGKGIALHSQVIQEYCRWVGAPPKVRGMLIRKAKGNGDDLGFLF 144
BLAST of NO19G00390 vs. NCBI_GenBank
Match: XP_009038064.1 (hypothetical protein AURANDRAFT_27980 [Aureococcus anophagefferens] >EGB07449.1 hypothetical protein AURANDRAFT_27980 [Aureococcus anophagefferens]) HSP 1 Score: 104.8 bits (260), Expect = 2.100e-19 Identity = 49/71 (69.01%), Postives = 57/71 (80.28%), Query Frame = 0 Query: 57 GKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 G +AKFGIFSPAV KILLG++ L+++RGK ISLHSQAI EFC FVGA KT+ L+KKAK NGD LGFL Sbjct: 2 GSMAKFGIFSPAVYAGKILLGDKGLDQIRGKGISLHSQAINEFCIFVGASTKTKGLLVKKAKNNGDTLGFL 72
BLAST of NO19G00390 vs. NCBI_GenBank
Match: CEL94740.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 103.6 bits (257), Expect = 4.700e-19 Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 0 Query: 33 RTALYSSPSIQPQQRQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 R A +PS + + + GK A FG+FSPAV++ K++LG+++LNKVRGK I+LHSQ IT+FC F GAQ R RLIKKAKT GD LG L Sbjct: 59 RPAAVEAPSEPEAAAEAPKKAVKKGKQATFGLFSPAVLIGKLVLGDKQLNKVRGKIIALHSQVITQFCDFTGAQRSMRQRLIKKAKTTGDRLGML 153
BLAST of NO19G00390 vs. NCBI_GenBank
Match: XP_002178708.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49406.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 101.7 bits (252), Expect = 1.800e-18 Identity = 63/126 (50.00%), Postives = 78/126 (61.90%), Query Frame = 0 Query: 13 LLALFALL-SSSHAFFVAAPA----------RTALYSSPSIQPQQRQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 +L FALL +++ AF VA A RT++ +P + G M G AKFG+FSPAV AK++LG+ KLNK+RGKAISLHSQ I EFC + GA R +LIKKAK NGD LGFL Sbjct: 7 ILVTFALLIATAAAFRVAGGATGGSSFVLSRRTSIAVAPQSSTTRAAAGVSNMRMGSQAKFGVFSPAVYAAKVVLGQDKLNKIRGKAISLHSQYIGEFCEWAGAY-HLRTKLIKKAKVNGDTLGFL 131
BLAST of NO19G00390 vs. NCBI_GenBank
Match: XP_002289457.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92994.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 96.7 bits (239), Expect = 5.700e-17 Identity = 61/123 (49.59%), Postives = 74/123 (60.16%), Query Frame = 0 Query: 12 LLLALFALLSSSHAFF-------VAAPARTALYSSPSIQPQQRQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 L+L + AL +SS F V+ + + P + + ++ G AKFGIFSPAV VAKI LG +LNK+RGKAISLHSQ I EFC + GA R RLIKKAKTNGD LGFL Sbjct: 7 LVLVVVALAASSVQGFAPTSLGGVSGGSNFVVSQRPRAAAPVARTSKTSLQMGSQAKFGIFSPAVYVAKIGLGNDRLNKIRGKAISLHSQYIGEFCEWAGAY-HLRTRLIKKAKTNGDTLGFL 128
BLAST of NO19G00390 vs. NCBI_GenBank
Match: OEU15757.1 (hypothetical protein FRACYDRAFT_209197 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 95.9 bits (237), Expect = 9.700e-17 Identity = 62/128 (48.44%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 13 LLALFAL-LSSSHAFFVAAPARTALYSSPSIQPQQRQQGRMTM------------MGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 +L LFAL LS +AF + T S S QR T MGGK +KFG+FSPAV AK++LG +LNK+RGK IS+HSQ I EFC ++GA R +LIKKAK NGD LGFL Sbjct: 7 VLVLFALALSVVNAFTIT----TGSQSGSSFLISQRSSATATTAAPVRTGVSSLHMGGKKSKFGVFSPAVYGAKVVLGTARLNKIRGKGISIHSQTIGEFCQWIGAY-HLRTKLIKKAKVNGDILGFL 129
BLAST of NO19G00390 vs. NCBI_GenBank
Match: NP_001151447.1 (pgr5 protein [Zea mays] >ACG42908.1 PGR5 [Zea mays] >ACR38643.1 unknown [Zea mays] >ONM03796.1 Protein PROTON GRADIENT REGULATION 5 chloroplastic [Zea mays]) HSP 1 Score: 94.4 bits (233), Expect = 2.800e-16 Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 0 Query: 35 ALYSSPSIQPQQRQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 AL S S++P+ R + MMG A G+F+P VVVA+ ++G ++ N++RGKAI+LHSQ ITEFC +GA K R LI+ AK NG+ LGFL Sbjct: 32 ALAMSVSVRPRCRARSPARMMGNVNAGKGLFAPLVVVARNIIGRKRFNQLRGKAIALHSQVITEFCKTIGADSKQRQGLIRLAKKNGEKLGFL 124
BLAST of NO19G00390 vs. NCBI_GenBank
Match: XP_024521357.1 (uncharacterized protein LOC112342936 [Selaginella moellendorffii]) HSP 1 Score: 90.1 bits (222), Expect = 5.300e-15 Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 38 SSPSIQPQQRQQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 SS S + + R+ + + G K GIF+P VVVA+ +LG ++ N++RGK I+LHSQ ITEFC VGA K R LI+ AK NG+ LGFL Sbjct: 74 SSSSARQRGRRSSLVVVAGSKEGSSGIFAPLVVVARSVLGAKQFNQLRGKGIALHSQVITEFCKSVGADNKVRQGLIRIAKKNGEKLGFL 163
BLAST of NO19G00390 vs. NCBI_GenBank
Match: XP_005703445.1 (electron carrier protein (proton gradient regulation 5) isoform 1 [Galdieria sulphuraria] >EME26925.1 electron carrier protein (proton gradient regulation 5) isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 89.7 bits (221), Expect = 7.000e-15 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0 Query: 48 QQGRMTMMGGKVAKFGIFSPAVVVAKILLGEQKLNKVRGKAISLHSQAITEFCYFVGAQGKTRNRLIKKAKTNGDDLGFL 128 +Q + + GKV+ FG F+P V V + +LG+ + NK+RG+AI+LHSQ ITEFC +VG + R LI+ AKTNG LGFL Sbjct: 49 KQSAIEVYMGKVSNFGPFTPVVYVTRWVLGKDRFNKIRGRAIALHSQVITEFCKYVGMDARLRQGLIRLAKTNGSKLGFL 128 The following BLAST results are available for this feature:
BLAST of NO19G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00390 ID=NO19G00390|Name=NO19G00390|organism=Nannochloropsis oceanica|type=gene|length=1668bpback to top protein sequence of NO19G00390.1 >NO19G00390.1-protein ID=NO19G00390.1-protein|Name=NO19G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=129bpback to top protein sequence of NO19G00390.2 >NO19G00390.2-protein ID=NO19G00390.2-protein|Name=NO19G00390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=129bpback to top Synonyms
Publications
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