NO18G02010, NO18G02010 (gene) Nannochloropsis oceanica

Overview
NameNO18G02010
Unique NameNO18G02010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2634
Alignment locationchr18:621902..624535 +

Link to JBrowse

Properties
Property NameValue
DescriptionAcyl-coenzyme A oxidase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:621902..624535 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009056catabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036250AcylCo_DH-like_C
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR029320Acyl-CoA_ox_N
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
Homology
BLAST of NO18G02010 vs. NCBI_GenBank
Match: EWM23417.1 (peroxisomal acyl-coenzyme a oxidase 1 [Nannochloropsis gaditana])

HSP 1 Score: 740.3 bits (1910), Expect = 4.300e-210
Identity = 365/433 (84.30%), Postives = 393/433 (90.76%), Query Frame = 0
Query:   35 MDVAPELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDGAVLRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDEFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSRVEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPELSG 468
            M+VAPELVQER  ASF P++LTQLVDGG AK+ RRRWLRSLIL+DPIF+NED+IYLNHTERYKRALAKCGRLDQLIN + L+EED  VLRS  SEDLPTLLHDLMFLPCLLSLCSEEQQAYWVP ARSKKVLGCYAQTE+GHGSNIQALQTTATFDPATDEF++DTPT Q++KWWPGTLGRTANTAMVIARLLLP     S  +SY+D+GIHNFIVPLRDLHTHALLPGVV RDIGPK+AFAGMDNGCLELH+VRIPRANLAQRFVRV+R GVWSRVEGTH KAAYVTMMQVRAIIVVHSARELSKA TIAIRYSAVR QG+D   +G    E QILDY SQQYRLLPLLAAS+GFFFCGRAV  LLAETE ALL G+KGQAEVG  MG+AHA+LAGLKSLCTTIAA+GIE+CRKCCGGHGYLACSGLPELSG
Sbjct:    1 MEVAPELVQERGKASFPPSTLTQLVDGGVAKMARRRWLRSLILSDPIFNNEDSIYLNHTERYKRALAKCGRLDQLINKYRLNEEDSIVLRSCTSEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPAARSKKVLGCYAQTELGHGSNIQALQTTATFDPATDEFIMDTPTAQAYKWWPGTLGRTANTAMVIARLLLPQESSSSSPASYKDMGIHNFIVPLRDLHTHALLPGVVTRDIGPKIAFAGMDNGCLELHAVRIPRANLAQRFVRVTRQGVWSRVEGTHSKAAYVTMMQVRAIIVVHSARELSKACTIAIRYSAVRRQGFDDSKTG---SELQILDYASQQYRLLPLLAASVGFFFCGRAVLTLLAETEDALLKGRKGQAEVGALMGRAHAALAGLKSLCTTIAADGIEECRKCCGGHGYLACSGLPELSG 430          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: XP_005853724.1 (acyl-CoA oxidase [Nannochloropsis gaditana CCMP526] >EKU22640.1 acyl-CoA oxidase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 739.6 bits (1908), Expect = 7.400e-210
Identity = 365/433 (84.30%), Postives = 393/433 (90.76%), Query Frame = 0
Query:   35 MDVAPELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDGAVLRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDEFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSRVEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPELSG 468
            M+VAPELVQER  ASF P++LTQLVDGG AK+ RRRWLRSLIL+DPIF+NED+IYLNHTERYKRAL+KCGRLDQLIN + L+EED  VLRS  SEDLPTLLHDLMFLPCLLSLCSEEQQAYWVP ARSKKVLGCYAQTE+GHGSNIQALQTTATFDPATDEF++DTPT Q++KWWPGTLGRTANTAMVIARLLLP     S  +SY+D+GIHNFIVPLRDLHTHALLPGVV RDIGPK+AFAGMDNGCLELH+VRIPRANLAQRFVRV+R GVWSRVEGTH KAAYVTMMQVRAIIVVHSARELSKA TIAIRYSAVR QG+D   +G    E QILDY SQQYRLLPLLAASIGFFFCGRAV  LLAETE ALL G+KGQAEVG  MG+AHA+LAGLKSLCTTIAA+GIE+CRKCCGGHGYLACSGLPELSG
Sbjct:    1 MEVAPELVQERGKASFPPSTLTQLVDGGVAKMARRRWLRSLILSDPIFNNEDSIYLNHTERYKRALSKCGRLDQLINKYRLNEEDSIVLRSCTSEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPAARSKKVLGCYAQTELGHGSNIQALQTTATFDPATDEFIMDTPTAQAYKWWPGTLGRTANTAMVIARLLLPQESSSSSPASYKDMGIHNFIVPLRDLHTHALLPGVVTRDIGPKIAFAGMDNGCLELHAVRIPRANLAQRFVRVTRQGVWSRVEGTHSKAAYVTMMQVRAIIVVHSARELSKACTIAIRYSAVRRQGFDDSKTG---SELQILDYASQQYRLLPLLAASIGFFFCGRAVLTLLAETEDALLKGRKGQAEVGALMGRAHAALAGLKSLCTTIAADGIEECRKCCGGHGYLACSGLPELSG 430          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: XP_005854193.1 (acyl-CoA oxidase [Nannochloropsis gaditana CCMP526] >EKU22170.1 acyl-CoA oxidase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 577.4 bits (1487), Expect = 4.900e-161
Identity = 293/433 (67.67%), Postives = 318/433 (73.44%), Query Frame = 0
Query:   35 MDVAPELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDGAVLRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDEFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSRVEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPELSG 468
            M+VAPELVQER  ASF P++LTQLVDGG AK+ RRRWLRSLIL+DPIF+NED+IYLNHTERYKRAL+KCGRLDQLIN + L+EED  VLRS  SEDLPTLLHDLMFLPCLLSLCSEEQQAYWVP ARSKKVLGCYAQTE+GHGSNIQALQTTATFDPATDEF++DTPT Q++KWWPGTLGRTANTAMVIARLLLP     S  +SY+D+GIHNFIVPLRDLHTHALLPGVV RDIGPK+AFAGMDNGCLELH+VRIPRANLAQRFVRV+R GVWSRVEGTH KAAYVTMM                                                                                          QAEVG  MG+AHA+LAGLKSLCTTIAA+GIE+CRKCCGGHGYLACSGLPELSG
Sbjct:    1 MEVAPELVQERGKASFPPSTLTQLVDGGVAKMARRRWLRSLILSDPIFNNEDSIYLNHTERYKRALSKCGRLDQLINKYRLNEEDSIVLRSCTSEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPAARSKKVLGCYAQTELGHGSNIQALQTTATFDPATDEFIMDTPTAQAYKWWPGTLGRTANTAMVIARLLLPQESSSSSPASYKDMGIHNFIVPLRDLHTHALLPGVVTRDIGPKIAFAGMDNGCLELHAVRIPRANLAQRFVRVTRQGVWSRVEGTHSKAAYVTMM------------------------------------------------------------------------------------------QAEVGALMGRAHAALAGLKSLCTTIAADGIEECRKCCGGHGYLACSGLPELSG 343          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: XP_002293157.1 (acyl-coa oxidase, partial [Thalassiosira pseudonana CCMP1335] >EED89618.1 acyl-coa oxidase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 398.3 bits (1022), Expect = 4.000e-107
Identity = 217/444 (48.87%), Postives = 281/444 (63.29%), Query Frame = 0
Query:   37 VAPELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADP--IFSNEDAIYLNHTERYKRALAKCGRLDQLINTHG---LSEEDGAVLRSLASED-LPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDEFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSRVEG----THPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDAD----DSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPELS 467
            V P L  ER    F+P  +T  +DG     +RRR L +LI+ DP  +FSNED  Y+  TER+ R++AK  RL +L  + G   +   +   L +  S+D +PT LH +MF+P +++LC  +QQA W+PL R  K++GCYAQTE+GHGSNI+AL+TTATF   ++E+++ +PT+ S K+WPGTLG+TAN AMVIARL+           S +D GIHNF+VPLR +  H LLPGV   DIGPK+ +  MDNG     +VRIPR N+A RF  V  +G + R+ G       K AY+TMMQVRA I+  S   L+ A TIAIRYS +R QGYDAD     +G    E Q+LDY  QQYRLLPLLAAS   FF G+ V   L + E  L+ G    A     +G  HA+ + LKS  TT  A+GIEDCRK CGGHG+L  SGL ELS
Sbjct:    1 VDPSLAAERLATPFTPLKITNFLDGSPQLTDRRRKLEALIIRDPSGVFSNEDNNYMGRTERHTRSIAKFVRLVELCRSAGGEIIHTPEFLTLAATISDDPMPTSLHWVMFVPNIMTLCDAQQQALWLPLCRDWKMIGCYAQTELGHGSNIRALETTATFLKESEEWIIHSPTLTSTKFWPGTLGKTANHAMVIARLI---------DGSGRDRGIHNFVVPLRSMEDHTLLPGVDTGDIGPKIGYNNMDNGWASFDNVRIPRRNMAMRFATVDEEGKYGRIGGGDGDAASKVAYITMMQVRAYIIHSSNEALAMACTIAIRYSCIRRQGYDADAEKKRNGNAPNEVQVLDYRQQQYRLLPLLAASYAIFFTGKHVLTRLKDIESQLVSG--STAITKTIVGDIHATTSALKSYATTFTADGIEDCRKACGGHGFLVASGLVELS 433          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: XP_002179644.1 (precursor of oxidase acyl-coa oxidase [Phaeodactylum tricornutum CCAP 1055/1] >EEC48630.1 precursor of oxidase acyl-coa oxidase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 389.4 bits (999), Expect = 1.900e-104
Identity = 217/451 (48.12%), Postives = 288/451 (63.86%), Query Frame = 0
Query:   35 MDVAPELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADP--IFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEE---------DGAVLRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDE------FVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSR--VEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKK-GQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPEL 466
            M V  +L +ER  A+F    LT ++DGG+ +  RRR L+++I  DP  IFSN+D  YL+ T+R+ R LAK  R+ +L  T G+ ++         D  VL +  ++DLPT LH +MF+P ++SLC EEQQ  W+PL R  K++GCYAQTE+GHGSN++AL+TTATF     +      FV+++PTI S K+WPGTLGRTAN AMVIARL+             +D G+HNF+VPLR +  H LLPGV + DIGPK+ +  MDNG  +  +V+IPR N+A RF  V   G +S+  V     K +Y+TMMQVRA I   + + L+ A TI  RYSA+R QGY +D     + E QILDY  QQ+R+ PL+AAS  FFF G+ V   L + E  L+  K   +A V       HAS + LKS  TT+AA+GIEDCRK CGGHG+L CSGLPEL
Sbjct:    1 MPVNEDLRRERARATFDVKQLTHMLDGGSDRTARRRQLQAIIERDPTGIFSNDDNAYLHRTDRHVRGLAKHVRMVELCRTLGIGDKYDGQVVMDPDFPVLLAALADDLPTALHWIMFVPNIVSLCDEEQQRAWLPLCRDWKMIGCYAQTELGHGSNVRALETTATFVSEDQDGTKGGSFVINSPTITSAKFWPGTLGRTANHAMVIARLI---------DGHGKDQGMHNFLVPLRSMKDHKLLPGVKSGDIGPKIGYNVMDNGFAQFDNVKIPRRNMAMRFAHVDERGRYSKKSVSAAASKISYITMMQVRAHICNEAGKNLAVACTIVTRYSALRRQGYASDG----ESELQILDYKQQQHRVFPLIAASYCFFFTGKRVMEQLKDIEDKLVSNKSISKAAVTD----IHASSSALKSFTTTVAADGIEDCRKACGGHGFLQCSGLPEL 434          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: EJK71600.1 (hypothetical protein THAOC_06939 [Thalassiosira oceanica])

HSP 1 Score: 388.3 bits (996), Expect = 4.200e-104
Identity = 220/468 (47.01%), Postives = 288/468 (61.54%), Query Frame = 0
Query:   33 TFMDVAPELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADP--IFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDG--------------------AVLRSLASED-LPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATD------EFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSRVEG-----THPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPELS 467
            T M +  +L +ER++ SF+P ++T  +DG A    +RR L S I  DP  +FSN +  Y++ TER+ RALAK  RL +L    G+  ++                       L S  S+D  PT LH +MFLP +++LC  EQQA W+PL R  K++GCYAQTE+GHGSNI+AL+TTATF           E+V+++PT+ S K+WPGTLG+TAN AMVIA+L+             ++ GIHNF+VPLR + TH LL GV   DIGPK+ +  MDNG     +VRIPR N+A RF  V+ DG +S+V G        K AY+TMMQVRA I+  S   L+ A TIAIRYSA+R QGY+A DS   + E Q+LDY  QQYRLLPLL+AS   +F G+ V A L E E+ L+ G +   +   Q    HA+ + LKS  TT  A+GIEDCRK CGGHG+L  SGL ELS
Sbjct:   15 TPMTINEDLAEERKSLSFNPRAITNFIDGSAEATLKRRQLESWITRDPTGVFSNANNNYIHRTERHTRALAKFVRLVELCRQAGIGADNAPREGDAVTHLEGEITCTPEFQTLVSACSDDPFPTSLHFVMFLPNIMTLCDAEQQATWLPLCRDWKMIGCYAQTELGHGSNIRALETTATFRSEAQGGMKGGEWVINSPTLTSAKFWPGTLGKTANHAMVIAQLI---------DGEGKERGIHNFLVPLRSMETHELLEGVETGDIGPKIGYNNMDNGFARFDNVRIPRRNMAMRFAVVNEDGKYSKVTGGKGSDAASKVAYITMMQVRAYIIHLSNESLAMACTIAIRYSAIRLQGYNA-DSRQARNEFQVLDYRQQQYRLLPLLSASYAIYFTGKHVLARLKEVERQLVAGSEKITKTISQ--DIHATTSALKSFATTFTADGIEDCRKACGGHGFLVASGLVELS 470          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: GAX26242.1 (acyl-CoA oxidase [Fistulifera solaris])

HSP 1 Score: 386.0 bits (990), Expect = 2.100e-103
Identity = 213/442 (48.19%), Postives = 278/442 (62.90%), Query Frame = 0
Query:   40 ELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDGAV--------LRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATD------EFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSR--VEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPEL 466
            +L +ER  A+FS  ++T  +DGGA+K  RRR L +LI ADPIF+N D +YL+ TER+ RAL K   L +L    G+  +DG +        L +  ++D PT LH +MF+P ++SLC EEQQ  W+PL R  K++GCYAQTE+GHGSN++AL+TTATF   ++       +++ +PTI S K+WPGTLGRTAN AMVIARL+              D GIHNF+VPLR +  H+LL GV   DIGPK+ +  MDNG      V+IPR N+A RF  V  +G +++  V     K AY+TMMQVRA IV  + + L++A TIA RYSAVR QGY A        E  ILDY  QQYRLL ++A S GFFF GR +   L + +Q L+     Q+   Q +   HAS + LKS  T I A G+ED RK CGGHG+L  SGLPEL
Sbjct:    4 DLQKERAQATFSVEAMTHFLDGGASKTARRRALEALIAADPIFTNTDNLYLHRTERHVRALQKFVHLIRLCRAWGIHGKDGEIVLDDDFPTLLAAVADDFPTSLHWVMFVPNIMSLCDEEQQQRWLPLCRDWKMIGCYAQTELGHGSNVRALETTATFQKESEGGMKGGSWIIHSPTITSAKFWPGTLGRTANHAMVIARLI---------DGQGIDRGIHNFLVPLRSMEDHSLLKGVETGDIGPKIGYNTMDNGYCRFDQVQIPRRNMAMRFASVDENGHYTKKQVSEATSKIAYITMMQVRAYIVNEAGKHLAQACTIATRYSAVRRQGYSA-----TGEELPILDYKQQQYRLLSMIACSYGFFFTGRRLLHHLQDIQQKLV---HHQSVTKQVVADLHASSSALKSFTTMITANGMEDLRKACGGHGFLQSSGLPEL 428          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: OEU12659.1 (acyl-CoA oxidase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 382.9 bits (982), Expect = 1.800e-102
Identity = 211/446 (47.31%), Postives = 283/446 (63.45%), Query Frame = 0
Query:   39 PELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADP--IFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEE---------DGAVLRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATD------EFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSR--VEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPEL 466
            PEL +ER NA+F    +T ++DG   K ERRR+L S+I  DP  IF+N+D  YL+ T+R+KR +AK  RL ++    G+ +E         D  V+    ++D+P  LH +MF P ++SLC EEQQ+ W+PL R  K++GCYAQTE+GHGSNI+AL+TTATF    +       FV+++PT+ S K+WPGTLGRTAN AMVIA+L+                GIHNF+V LR +  H LLPGV   DIGPK+ +  MDNG     +V IPR N+A RF  V ++G +S+  +     K AY+TMMQVR+IIVV +++ L+ A  + IRYSAVR QG+D D     K E Q+LDY  QQ+R+ PLLAAS   FF GR +   L   E+ L+  K    E   ++   HA+ + LKS  T IAA+GIE+CRK CGGHG+L+ SGLPEL
Sbjct:    3 PELKRERNNATFDVERITNVLDGDKDKTERRRFLESVIERDPTGIFNNDDNHYLHRTDRHKRGIAKGVRLIEICRKLGIGDECEGRITESKDFQVISEAVADDIPLALHWIMFQPNIVSLCDEEQQSRWLPLCRDWKMIGCYAQTELGHGSNIRALETTATFVSELNGGGDGGSFVINSPTLTSGKFWPGTLGRTANHAMVIAQLI---------DGDGIHRGIHNFLVQLRSMEDHTLLPGVKTGDIGPKIGYNTMDNGFAYFKNVMIPRRNMAMRFASVDKNGRYSKKVMSDAASKVAYITMMQVRSIIVVGASKALAMACAVTIRYSAVRKQGFDEDG----KSEMQVLDYTQQQHRIFPLLAASYCIFFTGRQLAKDLKALEEKLIAAKPVTKE---EVSDVHAASSALKSFSTMIAADGIEECRKACGGHGFLSSSGLPEL 432          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: GAX29487.1 (acyl-CoA oxidase [Fistulifera solaris])

HSP 1 Score: 378.3 bits (970), Expect = 4.300e-101
Identity = 209/442 (47.29%), Postives = 277/442 (62.67%), Query Frame = 0
Query:   40 ELVQERRNASFSPASLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDGAV--------LRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATD------EFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSR--VEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPEL 466
            +L +ER  A+FS  ++T  +DGGA+K  RRR L +LI ADPIF+N+D  Y++ TER+ RA+ K   L +L    G+  +DG +        L +  ++D PT LH +MF+P L+SLC EEQQ  W+PL R  K++GCYAQTE+GHGSN++AL+TTATF   ++       +++ +PTI S K+WPGTLGRTAN AMVIARL+              D GIHNF+VPLR +  H+LL GV   DIGPK+ +  MDNG      V+IPR N+A RF  V   G +++  V     K AY+TMMQVRA IV  + + L++A TIA RYSAVR QGY +        E  IL+Y  QQYRL  ++A S GFFF G+ +   L + +Q L+     Q+   Q +   HAS + LKS  T IAA G+ED RK CGGHG+L  SGLPEL
Sbjct:    4 DLQKERAQATFSVEAMTHFLDGGASKTARRRALEALIAADPIFNNDDNPYMHRTERHVRAVQKFVHLIRLCRAWGIHGKDGEIVLDDDFPTLLAAVADDFPTSLHWVMFVPNLMSLCDEEQQQEWLPLCRDWKMIGCYAQTELGHGSNVRALETTATFQSESEGGMPGGSWIIHSPTITSAKFWPGTLGRTANHAMVIARLV---------DGQGIDRGIHNFLVPLRSMEDHSLLKGVETGDIGPKIGYNTMDNGYCRFDHVQIPRRNMAMRFASVDETGHYTKKQVSEATSKIAYITMMQVRAYIVNEAGKHLAQACTIATRYSAVRRQGYSS-----AGEELPILEYKQQQYRLFSMIACSYGFFFTGKQLLHHLQDIQQKLV---HHQSVTKQIVADLHASSSALKSFTTMIAANGMEDLRKACGGHGFLQSSGLPEL 428          
BLAST of NO18G02010 vs. NCBI_GenBank
Match: CBN76282.1 (acyl-CoA oxidase (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 367.5 bits (942), Expect = 7.600e-98
Identity = 195/418 (46.65%), Postives = 263/418 (62.92%), Query Frame = 0
Query:   54 SLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRALAKCGRLDQLINTHGLSEEDGAVLRSLASEDLPTLLHDLMFLPCLLSLCSEEQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDEFVLDTPTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIVPLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFVRVSRDGVWSRVEGTHP-KAAYVTMMQVRAIIVVHSARELSKAATIAIRYSAVRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQALLAETEQALLLG---KKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKCCGGHGYLACSGLPELSG 468
            +LT+++DGGA     RR L++++  DP+F+N D ++++  ERY+  L K  R   L     LS ED  ++    ++ +PT +H LMF P + +LC+E+Q+ +W+P   S +V+GCYAQTE+GHGSNI+AL+TTATF   TDEF + +P+I + KWWPGT+GRTAN AMVIA+L++            +  GIHNFIVP+R    H  LPGV   DIGPK+ F  MDNG      VRIPR N+A R  RV RDGV++        K AY++MMQVR +I   + R L+KAATIA RYS VR QG+         +EHQ+LDY  Q +RLLPL+A++ GF F G  +   L   E+  + G     G    G  + + HA+ + LK LC+ + A GIEDCRK CGGHGYL  SGLPEL G
Sbjct:    8 ALTRVIDGGARNTATRRRLQAIVEQDPVFTNADNMFMSRPERYRHGLRKARRFTALKEELKLSPEDAELVSDSLNDAMPTYIHALMFRPNVEALCTEQQRQFWLPRCDSMEVIGCYAQTELGHGSNIRALETTATFVRETDEFEIHSPSITATKWWPGTMGRTANHAMVIAQLVIDG----------KQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYASFGSKESGKIAYISMMQVRVVIAKDAGRSLAKAATIATRYSIVRRQGFREG-----SKEHQVLDYTIQMHRLLPLIASAYGFHFAGVDLNLRLRRLEREHVHGLPPLAGGKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLG 409          
The following BLAST results are available for this feature:
BLAST of NO18G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23417.14.300e-21084.30peroxisomal acyl-coenzyme a oxidase 1 [Nannochloro... [more]
XP_005853724.17.400e-21084.30acyl-CoA oxidase [Nannochloropsis gaditana CCMP526... [more]
XP_005854193.14.900e-16167.67acyl-CoA oxidase [Nannochloropsis gaditana CCMP526... [more]
XP_002293157.14.000e-10748.87acyl-coa oxidase, partial [Thalassiosira pseudonan... [more]
XP_002179644.11.900e-10448.12precursor of oxidase acyl-coa oxidase [Phaeodactyl... [more]
EJK71600.14.200e-10447.01hypothetical protein THAOC_06939 [Thalassiosira oc... [more]
GAX26242.12.100e-10348.19acyl-CoA oxidase [Fistulifera solaris][more]
OEU12659.11.800e-10247.31acyl-CoA oxidase [Fragilariopsis cylindrus CCMP110... [more]
GAX29487.14.300e-10147.29acyl-CoA oxidase [Fistulifera solaris][more]
CBN76282.17.600e-9846.65acyl-CoA oxidase (Partial), partial [Ectocarpus si... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004057NSK004057Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02010.1NO18G02010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604404gene_8894Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100077g15gene7050Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02010.1NO18G02010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02010 ID=NO18G02010|Name=NO18G02010|organism=Nannochloropsis oceanica|type=gene|length=2634bp
ATGTTTTCCCTGCGGGTTGGATGTCAGGGgtgggtggtgaggagtgctga
gatgcagcgaagaaagcaaagtgcaacttgccttggcaaacgctgcaaca
gcctatttcatattcacttgaatgccaacacgctggacggggagcattcg
aggacgtaataacagcgagcactgtcatcatagccattatcctgtatcac
gtgccccggcctgcaaattcctgcctcctcaatttcatattttttccctt
cccagCTCACCCGAGCACAGTACATCAGGAGCGGCGTCAAGCAGCAGCGG
TAGCAACACATCCATCATCACCACCTTCATGGACGTCGCCCCAGAACTCG
TTCAAGAACGACGCAATGCCTCCTTCTCGCCCGCCTCCCTGACCCAGCTC
GTTGACGGTGGCGCTGCCAAGGTCGAGCGTCGACGCTGGCTGCGAAGCCT
CATTCTAGCAGACCCCATTTTTAGCAATGAAGATGCCATCTACCTCAATC
ACACCGAGCGCTACAAACGTGCTCTGGCGAAATGTGGTCGCTTGGACCAG
TTGATCAATACTCACGGGCTGAGCGAGGAGGATGGCGCTGTCCTTCGTTC
TCTCGCCTCGGAGGATCTTCCCACCCTCTTGCACGACCTCATGTTCCTCC
CCTGCCTCCTGAGTCTTTGCAGCGAAGAGCAACAAGCTTACTGGGTTCCC
TTAGCGCGAAGCAAGAAAGTGTTAGGATGCTATGCGCAGACGGAGATGGG
GCATGGCAGTAACATTCAAGCCTTGCAAACGACAGCGACCTTTGATCCCG
CAACCGATGAATTCGTCCTCGACACGCCCACCATTCAGTCCTTCAAGTGG
TGGCCTGGGACACTGGGCCGgtacgtcccgttttcctttcttgctttgtt
tataccctctgtagaagttgcagcttgtcgtttctttgtatgtatcaacg
tcccctgctccctcccttcctcccttttttccttcctcctttccctcctc
cacacccgcagCACCGCCAACACCGCAATGGTCATCGCCCGTCTCCTGCT
TCCTTCCTCCCCTCCTTTGTCTCCTTCCTCCTCCTACCAAGACCTGGGCA
TCCACAACTTTATCGTCCCTCTACGTGACCTTCACACGCATGCGCTGCTC
CCTGGCGTGGTGGCGCGGGACATAGGACCCAAGGTAGCCTTTGCGGGCAT
GGACAATGGCTGTCTAGAACTGCATTCTGTCAGAATTCCACGCGCAAATC
TCGCGCAGCGGTTTGTGCGTGTCTCAAGAGACGGGGTGTGGAGCCGGGTG
GAAGGGACGCACCCCAAGGCGGCTTACGTTACCATGATGCAGgtaggtgg
ggaggtacatcgtgtgggggttttggaagatccctcacttcctccagcct
ttcccatggaagattttctggaatttattaaggactgtccctcgcgtcat
tctggatcagtgtcagtgtattttgcatcgctcttgactccgaaatgtgt
tcacgtagttacaaatgtgtctacgtagttaccccctttatttgaagcac
tcggggtcgtgctagcatcaccacccactctgcccggaacttggacgaag
ccgccaccatggccgtctaatattcggagaccccaacaaccgtggctccg
gggctcttccttcgggggaaaaaaaacactactttataacatgtaatcat
ctggtatgtgactcatttcgtccaccttattctgggaaatccaaatgtac
atatgtacacagGTCCGTGCTATCATTGTCGTCCACTCTGCCCGGGAGCT
GAGCAAAGCTGCCACCATCGCCATTCGATATTCTGCCGTGCGCCACCAAG
GGTATGATGCCGACGATTCCGGCCCTGTGAAACGCGAGCATCAAATCCTT
GACTACCCTTCACAGCAATACCGCCTCCTTCCCCTCCTTGCCGCTTCAAT
TGGCTTCTTTTTCTGTGGACGTGCCGTGCAAGCCTTGCTGGCGGAAACTG
AACAAGCACTCTTGTTGGGGAAAAAAGGCCAAGCGGAAGTAGGGCAGCAG
ATGGGGAAGGCCCATGCGTCGCTGGCAGGGTTGAAAAGTCTATGTACGAC
GATCGCTGCCGAGGGGATTGAAGATTGTAGGAAATGTTGCGGAGGACATG
GTTATCTGGCTTGCTCGGGCCTGCCGGAGTTGTCAGGTATATCTTCTTTT
CTCTCTTTGTCTCCCTCTCTTCCTCCCTTCCTCCCTTTTTTCGTTGTCTT
CATTCGTTCCTTTACTCTCGTCTTTTCCTCCTTATCCTCCTTGTGTCGCG
CCCTTTATTGGCTCCCCCATCCCATCCTCTATATTTCATGTGCCCACTGC
CGTCTAGCCCGACGCCCGTTTCTTTCATGCTCCCAAATCCAGTGCCTCAT
CATTCCACTCTTTCTCTCCTTCTTTCCCTCCCTCTTTCCCTCTCTTTCCC
GCAGGCAATTTCCTCCAGCAATGCACGGTGGAGGGAGATAATGTCTTGCT
GACCCAACAAACCACGGGCTATTTATTAAAGAGCTACATCAAGTGGAGGA
TGGGGGATGGGAGTGAGGGAGAGAGGGGGGTCTGGATGAGGATTTGTGGT
ACTTTGCAAGTGCCTCGCAGGGGGAGGGCGGGGG
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protein sequence of NO18G02010.1

>NO18G02010.1-protein ID=NO18G02010.1-protein|Name=NO18G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=568bp
MFSLRVGCQGSPEHSTSGAASSSSGSNTSIITTFMDVAPELVQERRNASF
SPASLTQLVDGGAAKVERRRWLRSLILADPIFSNEDAIYLNHTERYKRAL
AKCGRLDQLINTHGLSEEDGAVLRSLASEDLPTLLHDLMFLPCLLSLCSE
EQQAYWVPLARSKKVLGCYAQTEMGHGSNIQALQTTATFDPATDEFVLDT
PTIQSFKWWPGTLGRTANTAMVIARLLLPSSPPLSPSSSYQDLGIHNFIV
PLRDLHTHALLPGVVARDIGPKVAFAGMDNGCLELHSVRIPRANLAQRFV
RVSRDGVWSRVEGTHPKAAYVTMMQVRAIIVVHSARELSKAATIAIRYSA
VRHQGYDADDSGPVKREHQILDYPSQQYRLLPLLAASIGFFFCGRAVQAL
LAETEQALLLGKKGQAEVGQQMGKAHASLAGLKSLCTTIAAEGIEDCRKC
CGGHGYLACSGLPELSGISSFLSLSPSLPPFLPFFVVFIRSFTLVFSSLS
SLCRALYWLPHPILYISCAHCRLARRPFLSCSQIQCLIIPLFLSFFPSLF
PSLSRRQFPPAMHGGGR*
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Synonyms
Publications