Naga_100077g15, gene7050 (gene) Nannochloropsis gaditana

Overview
NameNaga_100077g15
Unique Namegene7050
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:236483..239446 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100077g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:236483..239446 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL043ngnoL043Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G02010NO18G02010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7285rna7285-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7285rna7285Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7285

>rna7285-protein ID=rna7285-protein|Name=rna7285|organism=Nannochloropsis gaditana|type=polypeptide|length=700bp
MEVAPELVQERGKASFPPSTLTQLVDGGVAKMARRRWLRSLILSDPIFNN
EDSIYLNHTERYKRALAKCGRLDQLINKYRLNEEDSIVLRSCTSEDLPTL
LHDLMFLPCLLSLCSEEQQAYWVPAARSKKVLGCYAQTELGHGSNIQALQ
TTATFDPATDEFIMDTPTAQAYKWWPGTLGRTANTAMVIARLLLPQESSS
SSPASYKDMGIHNFIVPLRDLHTHALLPGVVTRDIGPKIAFAGMDNGCLE
LHAVRIPRANLAQRFVRVTRQGVWSRVEGTHSKAAYVTMMQVRAIIVVHS
ARELSKACTIAIRYSAVRRQGFDDSKTGSELQILDYASQQYRLLPLLAAS
VGFFFCGRAVLTLLAETEDALLKGRKGQAEVGALMGRAHAALAGLKSLCT
TIAADGIEECRKCCGGHGYLACSGLPELSGNFLQQCTVEGDNVLLTQQTV
GYLLKSYIKWRTGGPVLDEECQYFVTAADGAHAEGLGEGEKGVRDEPAVL
SLFSRRAFATLERLALRLQSLTEGEASLSQAGAWRRVLVDVMFVSRSHAL
YTVLRHFAAGLKSLRDGNDVSGVGKAGADAAFIRVLERLFFLFAFYHLSK
EAGDFLELGLLSPETVARVRGEVEILLGEVRPDAVALCDGWDWDDFELKS
ALGRWDGRYAEALLASAKKEPLNHQDPVDGWDRTWQPQWKVEEQTERARL
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Synonyms
Publications