NO18G01060, NO18G01060 (gene) Nannochloropsis oceanica

Overview
NameNO18G01060
Unique NameNO18G01060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2205
Alignment locationchr18:375411..377615 -

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Properties
Property NameValue
DescriptionZinc finger, CCCH-type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:375411..377615 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR000571Znf_CCCH
IPR013520Exonuclease_RNaseT/DNA_pol3
Homology
BLAST of NO18G01060 vs. NCBI_GenBank
Match: ETP36631.1 (hypothetical protein F442_15493 [Phytophthora parasitica P10297])

HSP 1 Score: 161.0 bits (406), Expect = 1.400e-35
Identity = 118/403 (29.28%), Postives = 178/403 (44.17%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDA--PNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFLE-------------QGPVAPVPR-----------------------------------------------LPAASNKKGRRAEAQ--QSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  + E  W+  K      K    ++A+DCEMC T++  + E+   AL R+S V G D  + ++   ++    P   +VD +TDIHGI P  + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D      TP LKD+  ALLG DMP  HDS  DAQ ++  A++                 GP+   PR                                               + A    +  ++EA   +SC L LHRIP  + ++ I + F   T+++P AV+ +V   + + G     F +  HA LAF T  GP        D  GRPQK + +     K Y  V L
Sbjct:   57 DTEWEQLVQLTQQSERFEKLF----SFPEDEPGWVTTKSKKK--KTHLKIVAVDCEMCVTQEEGTCERKTNALCRVSAVDGEDMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPVQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPTRATPGLKDLTKALLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPLVKEPREATRITERTEYTGPAMLVTTAYHPGEPREPAKPTPVKIPVNDASYIDMAAIETTRKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFIENTNIVPTAVEKIVWLPNQNRGSCNVTFATNAHAALAFETAQGPNGKTKITNDSIGRPQKTIAIVSFMGKTYKNVAL 453          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: OQS01611.1 (hypothetical protein ACHHYP_00624 [Achlya hypogyna])

HSP 1 Score: 160.2 bits (404), Expect = 2.400e-35
Identity = 105/312 (33.65%), Postives = 160/312 (51.28%), Query Frame = 0
Query:  427 VLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLV---LPSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDAPN--HTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFL--EQGPV---------------------APVPRLPAASNKKGRRAEAQQSCLLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVV-ATGDGSLGRATARFLSKHHADLAFSTLTGPARPDKDGRPQKRVHLAGKK--DYVQVRLMYA 708
            ++ALDCEMC T DP +  ++ KAL+R+++V G D   +L+D +V    P   V+ Y+TDIHGI P+ + +       A+  +L     +T++VGH L  DL +L +KH+ V+DT+ LF R+D P    TP LKD+   LL   MPD+HDS  DA++T+ +A+H L  E G V                      P   + A    K +  ++  S   +HRIP  +    + +   ++T V+P  V+ +V  T  GS       F S  HA LAF+ L G    D   RP K ++++  K   Y  ++ M A
Sbjct:   88 IVALDCEMCVTFDPSTETRNSKALVRVTLVDGEDPETILVDLIVHQPQPGHSVLLYKTDIHGIAPDLITNSKIDPARARKELLKHVGPDTIVVGHSLYGDLASLFLKHTNVIDTSFLFLRKDVPQIAQTPGLKDLTNQLLAFPMPDIHDSYLDAKMTMLVAKHALTCELGAVIEYDNAKASRRDDKTVAKSKLVPGVAIKAVDPSKVQDCDSDASRWKVHRIPKGIFNSDLEQFIITKTSVVPALVENLVFKTPKGS---TVVHFASAAHAQLAFAMLEGVETKDPLNRPVKALNVSDAKGITYKGIKFMLA 396          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: ETK78884.1 (hypothetical protein L915_15196 [Phytophthora parasitica] >ETL32331.1 hypothetical protein L916_15088 [Phytophthora parasitica])

HSP 1 Score: 159.8 bits (403), Expect = 3.100e-35
Identity = 117/403 (29.03%), Postives = 178/403 (44.17%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDA--PNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFLE-------------QGPVAPVPR-----------------------------------------------LPAASNKKGRRAEAQ--QSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  + E  W+  K      K    ++A+DCEMC T++  + E+   AL R+S V G +  + ++   ++    P   +VD +TDIHGI P  + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D      TP LKD+  ALLG DMP  HDS  DAQ ++  A++                 GP+   PR                                               + A    +  ++EA   +SC L LHRIP  + ++ I + F   T+++P AV+ +V   + + G     F +  HA LAF T  GP        D  GRPQK + +     K Y  V L
Sbjct:   57 DAEWEQLVQLTQQSERFEKLF----SFPEDESGWVTTKSKKK--KTHLKIVAVDCEMCVTQEEGTCERKTNALCRVSAVDGENMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPVQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPTRATPGLKDLTKALLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPLVKEPREATRITERTEYTGPAMLVTTAYHPGEPREPAKPTPVKIPVNDASYIDMAAIETTRKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFIENTNIVPTAVEKIVWLPNQNRGSCNVTFATNAHAALAFETAQGPNGKTKITNDSIGRPQKTIAIVSFMGKTYKNVAL 453          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: ETL85574.1 (hypothetical protein L917_14918 [Phytophthora parasitica])

HSP 1 Score: 159.1 bits (401), Expect = 5.300e-35
Identity = 119/403 (29.53%), Postives = 177/403 (43.92%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDA--PNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFL--EQGPVAP---------------------------------------VPRLPA---------------------ASNKKGRRAEAQQSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  + E  W+  K      K    ++A+DCEMC T++  + E+   AL R+S V G +  + ++   ++    P   +VD +TDIHGI P  + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D      TP LKD+  ALLG DMP  HDS  DAQ ++  A++    E G + P                                        PR PA                      + K    A   +SC L LHRIP  + ++ I + F   T+++P AV+ +V   + + G     F +  HA LAF T  GP        D  GRPQK + +     K Y  V L
Sbjct:   57 DAEWEQLVQLTQQSERFEKLF----SFPEDESGWVTTKSKKK--KTHLKIVAVDCEMCITQEEGTCERKTNALCRVSAVDGENMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPVQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPTRATPGLKDLTKALLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPRVKEPREATRITERTEYTGPAMLVTTAYHPGEPREPAKPTPVKIPVNDASYIDMAAIETTRKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFIENTNIVPTAVEKIVWLPNQNRGSCNVTFATNAHAALAFETAQGPNGKTKITNDSIGRPQKTIAIVSFMGKTYKNVAL 453          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: XP_008895194.1 (hypothetical protein PPTG_04684 [Phytophthora parasitica INRA-310] >ETM38724.1 hypothetical protein L914_15055 [Phytophthora parasitica] >ETN19336.1 hypothetical protein PPTG_04684 [Phytophthora parasitica INRA-310])

HSP 1 Score: 158.7 bits (400), Expect = 7.000e-35
Identity = 119/403 (29.53%), Postives = 177/403 (43.92%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDA--PNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFL--EQGPVAP---------------------------------------VPRLPA---------------------ASNKKGRRAEAQQSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  + E  W+  K      K    ++A+DCEMC T++  + E+   AL R+S V G +  + ++   ++    P   +VD +TDIHGI P  + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D      TP LKD+  ALLG DMP  HDS  DAQ ++  A++    E G + P                                        PR PA                      + K    A   +SC L LHRIP  + ++ I + F   T+++P AV+ +V   + + G     F +  HA LAF T  GP        D  GRPQK + +     K Y  V L
Sbjct:   57 DAEWEQLVQLTQQSERFEKLF----SFPEDEPGWVTTKSKKK--KTHLKIVAVDCEMCVTQEEGTCERKTNALCRVSAVDGENMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPVQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPTRATPGLKDLTKALLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPRVKEPREATRITERTEYTGPAMLVTTAYHPGEPREPAKPTPVKIPVNDASYIDMAAIETTRKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFIENTNIVPTAVEKIVWLPNQNRGSCNVTFATNAHAALAFETAQGPNGKTKITNDSIGRPQKTIAIVSFMGKTYKNVAL 453          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: ETO67446.1 (hypothetical protein F444_15635 [Phytophthora parasitica P1976])

HSP 1 Score: 158.7 bits (400), Expect = 7.000e-35
Identity = 119/403 (29.53%), Postives = 177/403 (43.92%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDA--PNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFL--EQGPVAP---------------------------------------VPRLPA---------------------ASNKKGRRAEAQQSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  + E  W+  K      K    ++A+DCEMC T++  + E+   AL R+S V G +  + ++   ++    P   +VD +TDIHGI P  + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D      TP LKD+  ALLG DMP  HDS  DAQ ++  A++    E G + P                                        PR PA                      + K    A   +SC L LHRIP  + ++ I + F   T+++P AV+ +V   + + G     F +  HA LAF T  GP        D  GRPQK + +     K Y  V L
Sbjct:   57 DAEWEQLVQLTQQSERFEKLF----SFPEDEPGWVTTKSKKK--KTHLKIVAVDCEMCVTQEEGTCERKTNALCRVSAVDGENMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPVQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPTRATPGLKDLTKALLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPRVKEPREATRITERTEYTGPAMLVTTAYHPGEPREPAKPTPVKIPVNDASYIDMAAIETTRKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFIENTNIVPTAVEKIVWLPNQNRGSCNVTFATNAHAALAFETAQGPNGKTKITNDSIGRPQKTIAIVSFMGKTYKNVAL 453          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: KUG01456.1 (Small RNA degrading nuclease 3 [Phytophthora nicotianae])

HSP 1 Score: 158.7 bits (400), Expect = 7.000e-35
Identity = 119/403 (29.53%), Postives = 177/403 (43.92%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDA--PNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFL--EQGPVAP---------------------------------------VPRLPA---------------------ASNKKGRRAEAQQSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  + E  W+  K      K    ++A+DCEMC T++  + E+   AL R+S V G +  + ++   ++    P   +VD +TDIHGI P  + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D      TP LKD+  ALLG DMP  HDS  DAQ ++  A++    E G + P                                        PR PA                      + K    A   +SC L LHRIP  + ++ I + F   T+++P AV+ +V   + + G     F +  HA LAF T  GP        D  GRPQK + +     K Y  V L
Sbjct:   51 DAEWEQLVQLTQQSERFEKLF----SFPEDEPGWVTTKSKKK--KTHLKIVAVDCEMCVTQEEGTCERKTNALCRVSAVDGENMLRNIISDFIVHQPEPGFHMVDPKTDIHGITPVQIASCKITVAQAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPTRATPGLKDLTKALLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSALELHGPRVKEPREATRITERTEYTGPAMLVTTAYHPGEPREPAKPTPVKIPVNDASYIDMAAIETTRKHKSEAMIARSCRLRLHRIPKGLSSKDIEKWFIENTNIVPTAVEKIVWLPNQNRGSCNVTFATNAHAALAFETAQGPNGKTKITNDSIGRPQKTIAIVSFMGKTYKNVAL 447          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: CCI40717.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 156.8 bits (395), Expect = 2.700e-34
Identity = 104/324 (32.10%), Postives = 164/324 (50.62%), Query Frame = 0
Query:  381 WSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCAT-RDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFER--EDAPNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFLEQGPVAPVPRLPAASNKKGRRAEAQQSCLLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVV---ATGDGSLGRATARFLSKHHADLAFSTLTGPARPDKDGRPQKRVHLA 695
            W   V++T +H  +E  Y   + +   +     +KK     K    + A+DCEMC    D  S + + KAL+R+SVV+G D  + +   L++    P   V+DY+T IHG+ P+ + +   +   AQ  ++    ++T+LVG  L  DL  L++ H + +DTAL+++R  ED     P L+D+A  LL  +MP  HDSV DAQ+T+  A H  + G    VP   +   K+   A A+   L +HRIP  V    I + F     ++P +V+ ++   A G    G     FLSK HADLAF T+    +     + +K   L+
Sbjct:  197 WEELVRSTREHPEYEKLYSFPSDQLGWKR--TRSKKKSTTLK----IAAIDCEMCVVGHDEDSSDINRKALVRVSVVNGEDLIRHIAADLIVHQPEPGYHVIDYKTFIHGLSPDQIHNSKISVAKAQKEVMKYISSDTILVGQSLDGDLKTLRITHDRCIDTALIYQRMTEDTNVQKPGLQDLAQHLLKFEMPQGHDSVLDAQITMLAAIHGAKYGYGKVVP-FNSDIGKRFDAALARTCRLRVHRIPKGVNVADIEKFFTEEAKIVPSSVESIMWSDAKGKTVYGSCHVTFLSKEHADLAFKTIPSVGKKKSVTKKRKEGELS 513          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: XP_024585914.1 (small rna degrading nuclease 2 [Plasmopara halstedii] >CEG49545.1 small rna degrading nuclease 2 [Plasmopara halstedii])

HSP 1 Score: 154.1 bits (388), Expect = 1.700e-33
Identity = 112/387 (28.94%), Postives = 170/387 (43.93%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFER--EDAPNHTPALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFLE-------------QGPVAPVPR--LPAASN-----------------------------------------------KKGRRAEAQQSCLLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRV 692
            +  W   V+ T  HA FE N+        G   W++        K    V+A+DCEMC TR   S E+   AL R+S V G +  + ++   ++    P   +VD +TDIHGI PE +     T   AQ  ML     +T++VGH +  DLT+++++H +V+DTAL+F+R  E++   TP LKD+   LLG DMP  HDS  DAQ ++  A++                 GP    PR  L  +SN                                                K +   A+   L +HRIP  + ++ I + F   T+++P+ V+ +    + + G     F +  HA LAF + +GP        D  GRPQK +
Sbjct:   56 DGEWEHLVQLTQKHALFERNF-CFPENVPG---WVSTSSQKK--KSHFKVVAIDCEMCVTRPEGSRERMSNALCRVSAVDGENMLRNIISDFLIHQPEPGYHMVDTKTDIHGITPEQIAGCKITMAQAQKKMLKYINEDTIVVGHSVHGDLTSMRIRHRRVIDTALIFQRKGENSTRATPGLKDLTKFLLGFDMPQGHDSTVDAQASMLAAKYAARHQTGSIIPSAVELHGPRVKEPRQVLTRSSNFLKMTEYTGPAMLIASAYQPKHATGAIELAANVASHIDMAANNTDDTNKFKEIVARSCRLRVHRIPKGLSSKDIEKWFLENTNIVPLIVEQIAWLPNQNRGSCNVTFSTNAHAALAFESASGPNGKSKITLDSIGRPQKTI 436          
BLAST of NO18G01060 vs. NCBI_GenBank
Match: POM69097.1 (nuclease [Phytophthora palmivora var. palmivora])

HSP 1 Score: 154.1 bits (388), Expect = 1.700e-33
Identity = 114/390 (29.23%), Postives = 174/390 (44.62%), Query Frame = 0
Query:  378 ESNWSCCVKATLDHARFEPNYRVVASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVSGHDENQVLLDTLVL----PSLPVVDYRTDIHGIRPEDLRSVMFTFRHAQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFERED-APNH-TPALKDVAGALLGLDMPDMHDSVADAQVTLRIARH-------------FLEQGPVAPVPR-----------------------------------LPAASNKKG-RRAEAQQSC-LLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVATGDGSLGRATARFLSKHHADLAFSTLTGP-----ARPDKDGRPQKRVHLAG--KKDYVQVRL 705
            ++ W   V+ T    RFE  +    S  +    W+  K      K    ++A+DCEMC T +  + ++   AL R+S V G +  + ++   ++        +VD +TDIHGI PE + S   T   AQ  ML     +T++VGH +  DL ++++ H +V+DTAL+F+R+D +P+  TP LKD+   LLG DMP  HDS  DAQ ++  A++             F   GP    PR                                    P A  + G   A+  +SC L +HRIP  + ++ I   F   T ++P AV+ +    + + G     F +  HA LAF +  GP        D  GRPQK + +     K Y  V L
Sbjct:   17 DTEWEQLVQLTQQSERFEQLF----SFPENAPGWVTTKSKKK--KTHLKIVAVDCEMCVTEEEGTSDRKTNALCRVSAVDGENMLRNIISDFIVHQPEDGFHMVDPKTDIHGITPEQIASCKITMAKAQKKMLKYINKDTIVVGHSVYGDLASMRINHRRVIDTALIFQRKDGSPSRATPGLKDLTKFLLGFDMPQGHDSTVDAQASMMAAKYAARHETGRIIPSAFELHGPRVREPRAGQTSNSRPATVKIPVNEASYIDMAAIKKDDAVETTPGADKRSGLSEAKIARSCRLRVHRIPKGLSSKDIENWFIENTQIIPTAVEKISWLANQNRGSCNVTFSTNAHAALAFESAKGPNGKTKITTDAIGRPQKTIAIVSYMGKTYKNVAL 400          
The following BLAST results are available for this feature:
BLAST of NO18G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETP36631.11.400e-3529.28hypothetical protein F442_15493 [Phytophthora para... [more]
OQS01611.12.400e-3533.65hypothetical protein ACHHYP_00624 [Achlya hypogyna... [more]
ETK78884.13.100e-3529.03hypothetical protein L915_15196 [Phytophthora para... [more]
ETL85574.15.300e-3529.53hypothetical protein L917_14918 [Phytophthora para... [more]
XP_008895194.17.000e-3529.53hypothetical protein PPTG_04684 [Phytophthora para... [more]
ETO67446.17.000e-3529.53hypothetical protein F444_15635 [Phytophthora para... [more]
KUG01456.17.000e-3529.53Small RNA degrading nuclease 3 [Phytophthora nicot... [more]
CCI40717.12.700e-3432.10unnamed protein product [Albugo candida][more]
XP_024585914.11.700e-3328.94small rna degrading nuclease 2 [Plasmopara halsted... [more]
POM69097.11.700e-3329.23nuclease [Phytophthora palmivora var. palmivora][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003961NSK003961Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01060.1NO18G01060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609085gene_9538Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100053g27gene7134Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01060.1NO18G01060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01060 ID=NO18G01060|Name=NO18G01060|organism=Nannochloropsis oceanica|type=gene|length=2205bp
ATGGCCCCCGCCACCCTGAAATATAAGCTCAAAAAGGTAGAGGAGGGGCT
GGCCGGGGACGAAAAGCCGGTTTGTGCCTTCTTCTCCCTGCCACAAGGTT
GCCGAAACGGAGCCAAGTGTCCTTTTATGCACGGGGAGGCAGGCGCCGCA
TCCGAGGAGCGGCCCAAGGCCACCCCCACAAATAAGACGACAGGTGTGAC
CAAGAACGCTCAGGCCATGCAGCAAGTCCGCCTTCAGCTCGCATCGGAGC
AGGCTAAGAAGCGTACGGCTCCCGCCCCCTCGACGCCTGTTGGTGGTGCC
ACCAGCACATTTGCCAAAAGGTTTAAGCGACAGGAGCCCGAAGAGGAGGA
GTCCACCGAGGAGGAGGACGAGGAGGAAGGTGAGGAGGAAAAAGTCCCCG
CCCCACCCCTCAACGTCATCAAGCCCACAGTTCCTGCGCGACAAGTTCCT
GTGCCGACAAAAACTGCGCCTGCATCCAAAAAGGCAGCTCCTGTCCCCAC
CCTCAGCAAGCCCGTCGGCACGGGCAATACTGATGATGTGATGAATCCTT
TCCTCGCGATTGCTCGGCCTCCCACATCCGCGCCGCCCACGCAACAACAG
CAACAACAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGAAGAAGAA
GCAATTTCCTGCAGGACCGGCGACGAACGCCACCCCCGTCACCATAGGAA
ACAAGAAAAACAACACCAGTAACACCAAGCCCCCTCCTGTTGCCAAGACC
ATAGTTCCCGCTCCGATAGCGGCAGCAGTGGCTCCAATCGAACGCAGACC
TGCTGCACGTGTGACTGCCGCTGCCCTCACAAACAACAAACCCGCTAATG
GAAATGGGGTGGGGATGCTTGGGAAGATCTCTGCCTTGCCCGTCACTCCA
TTTACTATCACACACAATCACAAGATGGAAATGAAGCAGGAGGAGGTGGA
GGTGGAGGACGGAGAGGTTGTGGAAGAAGGGGGAGGGGTAGAGGAAGAAC
AGCACTTCAAGGAGGAGATAGAGGAAGAGAAGCCGGTGGGGGCGGTAGCC
AAAAAGGTCAAGAAACAACAGCAGCTTCAGCAACAGCGGCAGGAGGAAGT
TGTTATGGAGGAGGAGGTGTGCGTACACGGGGAGAGCAATTGGTCCTGCT
GCGTGAAGGCTACTTTGGATCATGCGCGTTTTGAACCCAACTATCGGGTG
GTTGCTAGCAAAACGAAGGGGGAGGGGGAGTGGATCGCAGCGAAAAAGCA
CGGGGCGTGGTGCAAGGACCTCCCTCACGTCCTCGCTTTGGATTGTGAGA
TGTGTGCAACCCGGGATCCGGTCAGCATGGAGCAGGATGGGAAGGCTTTG
ATCCGATTAAGTGTAGTGAGTGGGCACGATGAGAACCAGGTATTGCTTGA
CACGCTCGTCTTGCCTTCCTTGCCTGTGGTGGACTATCGCACAGACATCC
ATGGGATTCGCCCAGAGGACTTGAGAAGTGTAATGTTTACATTTAGACAT
GCTCAGGCGGCGATGCTGCATTTGTGTTGTACCGAGACTGTGCTGGTGGG
TCATGGGTTGGCCAACGATCTGACTGCTTTAAAAATGAAGCACTCCAAGG
TGGTGGACACTGCCCTTCTCTTCGAGAGGGAGGACGCGCCAAACCATACC
CCTGCATTAAAGGACGTGGCGGGTGCGTTGCTTGGCTTGGATATGCCGGA
CATGCACGATTCGGTGGCAGATGCGCAGGTCACGCTGAGAATCGCCCGAC
ACTTTTTGGAGCAGGGACCCGTGGCGCCTGTCCCCCGTTTACCGGCAGCG
AGCAATAAGAAGGGGAGGCGGGCAGAGGCACAGCAAAGTTGCCTTTTATT
GCATCGGATTCCTCTGTATGTGAAGGCGGAACATATCTTGGAGATGTTTC
AGAGTCGGACCCATGTCATGCCTGTGGCGGTGGATCCAGTAGTGGCGACG
GGGGATGGAAGCTTGGGGAGGGCTACTGCCCGCTTTCTGTCAAAGCACCA
TGCCGATCTTGCGTTTAGTACCTTGACGGGCCCGGCTAGGCCTGATAAGG
ATGGACGGCCCCAGAAGAGGGTGCATTTGGCGGGGAAGAAGGATTATGTG
CAGGTGAGGTTGATGTACGCGCCAGGGAAGGAGGAGGGAGAGGAAGGGGG
GGAGGGAGTGGTGAAAGAGGATGCGACGTCGTCGCCGCCGGCGAAGATCT
TTTAG
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protein sequence of NO18G01060.1

>NO18G01060.1-protein ID=NO18G01060.1-protein|Name=NO18G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=735bp
MAPATLKYKLKKVEEGLAGDEKPVCAFFSLPQGCRNGAKCPFMHGEAGAA
SEERPKATPTNKTTGVTKNAQAMQQVRLQLASEQAKKRTAPAPSTPVGGA
TSTFAKRFKRQEPEEEESTEEEDEEEGEEEKVPAPPLNVIKPTVPARQVP
VPTKTAPASKKAAPVPTLSKPVGTGNTDDVMNPFLAIARPPTSAPPTQQQ
QQQQQQQQQQQQQQKKKQFPAGPATNATPVTIGNKKNNTSNTKPPPVAKT
IVPAPIAAAVAPIERRPAARVTAAALTNNKPANGNGVGMLGKISALPVTP
FTITHNHKMEMKQEEVEVEDGEVVEEGGGVEEEQHFKEEIEEEKPVGAVA
KKVKKQQQLQQQRQEEVVMEEEVCVHGESNWSCCVKATLDHARFEPNYRV
VASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKAL
IRLSVVSGHDENQVLLDTLVLPSLPVVDYRTDIHGIRPEDLRSVMFTFRH
AQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDAPNHT
PALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFLEQGPVAPVPRLPAA
SNKKGRRAEAQQSCLLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVAT
GDGSLGRATARFLSKHHADLAFSTLTGPARPDKDGRPQKRVHLAGKKDYV
QVRLMYAPGKEEGEEGGEGVVKEDATSSPPAKIF*
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Synonyms
Publications