jgi.p|Nanoce1779_2|609085, gene_9538 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|609085
Unique Namegene_9538
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_44:43188..45597 +

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Properties
Property NameValue
TranscriptId609171
ProteinId609085
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:43188..45597 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0042578phosphoric ester hydrolase activity
GO:0043765T/G mismatch-specific endonuclease activity
GO:0004527exonuclease activity
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL064ncniL064Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G01060NO18G01060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609085mRNA_9538-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609085mRNA_9538Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|609085

>mRNA_9538-protein ID=mRNA_9538-protein|Name=jgi.p|Nanoce1779_2|609085|organism=Nannochloropsis oceanica|type=polypeptide|length=735bp
MAPATLKYKLKKVEEGLAGDEKPVCAFFSLPQGCRNGAKCPFMHGEAGAA
SEERPKATPTNKTTGVTKNAQAMQQVRLQLASEQAKKRTAPAPSTPVGGA
TSTFAKRFKRQEPEEEESTEEEDEEEGEEEKVPAPPLNVIKPTVPARQVP
VPTKTAPASKKAAPVPTLSKPVGTGNTDDVMNPFLAIARPPTSAPPTQQQ
QQQQQQQQQQQQQQKKKQFPAGPATNATPVTIGNKKNNTSNTKPPPVAKT
IVPAPIAAAVAPIERRPAARVTAAALTNNKPANGNGVGMLGKISALPVTP
FTITHNHKMEMKQEEVEVEDGEVVEEGGGVEEEQHFKEEIEEEKPVGAVA
KKVKKQQQLQQQRQEEVVMEEEVCVHGESNWSCCVKATLDHARFEPNYRV
VASKTKGEGEWIAAKKHGAWCKDLPHVLALDCEMCATRDPVSMEQDGKAL
IRLSVVSGHDENQVLLDTLVLPSLPVVDYRTDIHGIRPEDLRSVMFTFRH
AQAAMLHLCCTETVLVGHGLANDLTALKMKHSKVVDTALLFEREDAPNHT
PALKDVAGALLGLDMPDMHDSVADAQVTLRIARHFLEQGPVAPVPRLPAA
SNKKGRRAEAQQSCLLLHRIPLYVKAEHILEMFQSRTHVMPVAVDPVVAT
GDGSLGRATARFLSKHHADLAFSTLTGPARPDKDGRPQKRVHLAGKKDYV
QVRLMYAPGKEEGEEGGEGVVKEDATSSPPAKIF*
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Synonyms
Publications