NO18G00440, NO18G00440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00440 vs. NCBI_GenBank
Match: CBN74185.1 (putative endonuclease [Ectocarpus siliculosus]) HSP 1 Score: 266.9 bits (681), Expect = 1.200e-67 Identity = 137/266 (51.50%), Postives = 181/266 (68.05%), Query Frame = 0 Query: 45 LLSKAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCWVKGGKSKGAPPPSLPLTSSGKGGGXXXXXXGGLEEWLIQFEGASP---GKANKNIILYSERRKE 308 L KA I +++D+LYP+PPIP++H D+++LL V+LSAQTTD +VN VT LF+VAP P L+ + H + IRSVGLAP KAK++I ++ ++D F G+VP TFE L+SLPGVG KTA+V+M QAFN PAFPVDTH+HR ALRWGL K ++ KVE L ++FPRD+W+++ LQ IYFGREHC A+ H +SACPIC WVK G+P LT L ++L ASP K++KN I+YSER+ E Sbjct: 258 LAEKAALIIQIMDKLYPDPPIPINHMDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQRTIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVK-KTGPGSPKALAQLTC--------------LNDYL-----ASPTPTKKSSKNAIVYSERKLE 503
BLAST of NO18G00440 vs. NCBI_GenBank
Match: WP_083457314.1 (endonuclease III [Sandaracinus amylolyticus] >AKF05148.1 Endonuclease III [Sandaracinus amylolyticus]) HSP 1 Score: 264.6 bits (675), Expect = 5.900e-67 Identity = 131/222 (59.01%), Postives = 156/222 (70.27%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCWVKGGKSKGAPPPSLPLTSSGKGG 270 KA I +L++LYP+PPIPLDH D ++LL+AV+LSAQTTD KVNEVTP LF APTP +AAL A +L+ IR VGL+P KAK + G A + GGQVP TFEELE+LPGVGHKTASV+M QAF +PAFPVDTH+HR A RWGL + V++ EA LK LF R W ++ LQIIYFGREHCPA +H SACPIC W K + A KGG Sbjct: 11 KAARILEILERLYPSPPIPLDHVDAFTLLVAVVLSAQTTDKKVNEVTPALFAAAPTPEAMAALSEAEILAYIRQVGLSPQKAKALKGLATKIATEHGGQVPRTFEELEALPGVGHKTASVVMIQAFGHPAFPVDTHIHRLAWRWGL-SDGSSVERTEADLKRLFDRSKWDKLHLQIIYFGREHCPALRHDLSACPICSWAAPAKVRAAEAKGGATKGMSKGG 231
BLAST of NO18G00440 vs. NCBI_GenBank
Match: KPK14970.1 (endonuclease III [Myxococcales bacterium SG8_38]) HSP 1 Score: 257.7 bits (657), Expect = 7.300e-65 Identity = 128/199 (64.32%), Postives = 146/199 (73.37%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCW 247 KA+ I +LD+LYP PPIPL H D ++LL+AV+LSAQTTD KVNEVTP LF+ AP P +AALP +L LIR+VGLAP KAKN+ A+ LVD GG+VP+ E LE LPGVGHKTASVLM QAF PAFPVDTH+HR A RWGL + V K E LKSLFP D W R LQIIYFGREHCPA+ H S C IC W Sbjct: 6 KAERIGAILDRLYPEPPIPLHHRDPFTLLVAVMLSAQTTDKKVNEVTPALFQEAPDPESMAALPVERILELIRTVGLAPTKAKNLQAMARKLVDEHGGKVPADIEALEELPGVGHKTASVLMCQAFGLPAFPVDTHIHRLAARWGL-SNGKSVVKTEQDLKSLFPADTWIRRHLQIIYFGREHCPARGHDLSRCEICSW 203
BLAST of NO18G00440 vs. NCBI_GenBank
Match: PIE20102.1 (endonuclease III [Proteobacteria bacterium]) HSP 1 Score: 252.3 bits (643), Expect = 3.100e-63 Identity = 123/199 (61.81%), Postives = 149/199 (74.87%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCW 247 KA I ++L+ LYP PIPLDH D Y+LL+AV+LSAQTTD KVN+VTPGLF VA TP +AALP + LIR +GLAP KAKN+ + +LV+ GG VP +FE+LE+LPGVGHKTASV+MSQAF +PAFPVDTH+HR A RWGL + + V K E LK F W+++ LQIIYFGREHCPA+ H SACPIC W Sbjct: 6 KAARIVQILEDLYPQTPIPLDHSDPYTLLVAVMLSAQTTDKKVNQVTPGLFAVASTPEAMAALPVDEIRVLIREIGLAPTKAKNLQALSALLVERHGGVVPDSFEDLEALPGVGHKTASVVMSQAFGHPAFPVDTHIHRLAARWGL-SDGKRVDKTERDLKRTFDVALWNKLHLQIIYFGREHCPARGHDLSACPICSW 203
BLAST of NO18G00440 vs. NCBI_GenBank
Match: WP_096326290.1 (endonuclease III [Nannocystis exedens] >SFE57004.1 DNA-(apurinic or apyrimidinic site) lyase /endonuclease III [Nannocystis exedens] >PCC67907.1 endonuclease III [Nannocystis exedens]) HSP 1 Score: 251.5 bits (641), Expect = 5.200e-63 Identity = 121/199 (60.80%), Postives = 149/199 (74.87%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCW 247 KA+ I +LD+LYP PP+PL H D ++LL+AV+LSAQTTD +VN VTP LF+ APTP +A L A +L IR+ GLAP KAKNI +++L++ GGQVP+ LE+LPGVGHKTASV+M QAF PAFPVDTH+HR A RWGL T V+K EA LK+L+P +AWSR+ LQIIYFGREHCPA+ H CPIC W Sbjct: 6 KARKIQAILDRLYPQPPMPLLHGDPFTLLVAVVLSAQTTDARVNLVTPELFRRAPTPEAMARLTEAEILGFIRTCGLAPAKAKNIRRLSELLLERHGGQVPNDMAALEALPGVGHKTASVVMVQAFGVPAFPVDTHIHRLAARWGLSDGT-SVEKTEADLKALWPPEAWSRLHLQIIYFGREHCPARGHDPKVCPICSW 203
BLAST of NO18G00440 vs. NCBI_GenBank
Match: PRQ04509.1 (Endonuclease III [Enhygromyxa salina]) HSP 1 Score: 251.1 bits (640), Expect = 6.800e-63 Identity = 122/204 (59.80%), Postives = 148/204 (72.55%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCWVKGGK 252 KAQ I +LD+LYP P IPL H D ++LLIAV+LSAQTTD +VNEVTP LF+ PTPA +AALP A +L I+++GLAP KAK + AK LV+ F G+VPS FE LESLPGVGHKTA V+M+QAF PAFP+DTH+HR A RWGL K ++V + E LK +FP W+ L+IIYFGREHCPA+ H CPIC W K Sbjct: 12 KAQKILAILDELYPTPAIPLRHNDAFTLLIAVLLSAQTTDARVNEVTPALFEDGPTPAKMAALPVARILHHIKTLGLAPTKAKRVKALAKQLVEDFDGEVPSDFEGLESLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLSK-AKNVVQTERDLKKVFPESRWADAHLKIIYFGREHCPAQFHELEQCPICAWAASKK 214
BLAST of NO18G00440 vs. NCBI_GenBank
Match: WP_106390189.1 (endonuclease III [Enhygromyxa salina]) HSP 1 Score: 251.1 bits (640), Expect = 6.800e-63 Identity = 122/204 (59.80%), Postives = 148/204 (72.55%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCWVKGGK 252 KAQ I +LD+LYP P IPL H D ++LLIAV+LSAQTTD +VNEVTP LF+ PTPA +AALP A +L I+++GLAP KAK + AK LV+ F G+VPS FE LESLPGVGHKTA V+M+QAF PAFP+DTH+HR A RWGL K ++V + E LK +FP W+ L+IIYFGREHCPA+ H CPIC W K Sbjct: 6 KAQKILAILDELYPTPAIPLRHNDAFTLLIAVLLSAQTTDARVNEVTPALFEDGPTPAKMAALPVARILHHIKTLGLAPTKAKRVKALAKQLVEDFDGEVPSDFEGLESLPGVGHKTAGVVMAQAFGVPAFPIDTHIHRLAARWGLSK-AKNVVQTERDLKKVFPESRWADAHLKIIYFGREHCPAQFHELEQCPICAWAASKK 208
BLAST of NO18G00440 vs. NCBI_GenBank
Match: XP_013901323.1 (endonuclease III [Monoraphidium neglectum] >KIZ02304.1 endonuclease III [Monoraphidium neglectum]) HSP 1 Score: 248.8 bits (634), Expect = 3.400e-62 Identity = 122/206 (59.22%), Postives = 153/206 (74.27%), Query Frame = 0 Query: 45 LLSKAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKE----TQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCW 247 LL+KA I R L LYP+P IPL+H +++ LL+AV+LSAQTTD KVNEVTP LFK+AP A +AA + + ++I+ +GLAP KAKN+ AA +LV+ GGQVPSTFEELE+LPGVGHKTASV+M+QAF PAFPVDTH+HR A RWGL + V+ E LK+LF + W + LQIIYFGREHCPA++H + CPIC W Sbjct: 47 LLAKADRIRRQLAALYPSPGIPLEHTNHFQLLVAVMLSAQTTDKKVNEVTPTLFKLAPDAAAMAAQEVSVIQAIIQPIGLAPTKAKNLRAAAALLVERHGGQVPSTFEELEALPGVGHKTASVVMAQAFGLPAFPVDTHIHRLAQRWGLTADGAGGAGGVEATERDLKALFLPEEWHDLHLQIIYFGREHCPAQRHDPTGCPICSW 252
BLAST of NO18G00440 vs. NCBI_GenBank
Match: ANM31229.1 (hypothetical protein ABI59_19100 [Acidobacteria bacterium Mor1]) HSP 1 Score: 247.3 bits (630), Expect = 9.800e-62 Identity = 124/222 (55.86%), Postives = 156/222 (70.27%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCWVKGGKSKGAPPPSLPLTSSGKGG 270 K + I ++LD+L P PIPLDH Y LL+AV LSAQTTD +VN VTP LF APTP +A L +L IR+ GLAP KAKN+ A+ LV+ G+VP++FE LE+LPGVGHKTASV+M+QAF PAFPVDTH+HR A RWGL + + V+K E LK++FP D+W+R+ LQIIYFGR++CPA++H SACPIC W K + A T SG GG Sbjct: 6 KGERIRKILDELIPEVPIPLDHETPYQLLVAVALSAQTTDERVNMVTPSLFAAAPTPRKMAKLSADQILEHIRTCGLAPTKAKNVKKMAEQLVELHDGEVPASFEALEALPGVGHKTASVVMAQAFGIPAFPVDTHIHRLAARWGL-SDGRSVEKTERDLKAVFPEDSWNRLHLQIIYFGRQYCPAQRHDLSACPICGWA-ATKKRIAEEAGRKSTRSGNGG 225
BLAST of NO18G00440 vs. NCBI_GenBank
Match: PKN57692.1 (endonuclease III [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14]) HSP 1 Score: 246.9 bits (629), Expect = 1.300e-61 Identity = 120/199 (60.30%), Postives = 150/199 (75.38%), Query Frame = 0 Query: 48 KAQAIHRLLDQLYPNPPIPLDHFDNYSLLIAVILSAQTTDGKVNEVTPGLFKVAPTPAHLAALPHATVLSLIRSVGLAPGKAKNIIGAAKMLVDTFGGQVPSTFEELESLPGVGHKTASVLMSQAFNYPAFPVDTHVHRCALRWGLCKETQDVKKVEAALKSLFPRDAWSRIGLQIIYFGREHCPAKKHVSSACPICCW 247 KA+ I +L++L+P PIPLDH D ++LL+AV+LSAQTTD KVNEVTP LF AP PA +AAL + LIR +GLAP KAKN+ A++L++ G+VP +FE LE+LPGVGHKTASV+MSQAF PAFPVDTH+HR A RWGL + + V+K EA LK+ FP W+R+ LQII+FGREHCPA+ H S CPIC W Sbjct: 6 KARRIVAILNELHPETPIPLDHTDPFTLLVAVMLSAQTTDKKVNEVTPALFARAPGPAAMAALEVEEIRDLIREIGLAPTKAKNLRRTAELLLERHQGEVPRSFEALEALPGVGHKTASVVMSQAFGVPAFPVDTHIHRLAARWGL-SDGKTVEKTEADLKATFPEALWNRLHLQIIFFGREHCPARGHDLSRCPICGW 203 The following BLAST results are available for this feature:
BLAST of NO18G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00440 ID=NO18G00440|Name=NO18G00440|organism=Nannochloropsis oceanica|type=gene|length=3516bpback to top protein sequence of NO18G00440.1 >NO18G00440.1-protein ID=NO18G00440.1-protein|Name=NO18G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=505bpback to top protein sequence of NO18G00440.2 >NO18G00440.2-protein ID=NO18G00440.2-protein|Name=NO18G00440.2|organism=Nannochloropsis oceanica|type=polypeptide|length=484bpback to top Synonyms
Publications
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