NO17G02990, NO17G02990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02990 vs. NCBI_GenBank
Match: EWM24104.1 (atp-dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 984.6 bits (2544), Expect = 2.100e-283 Identity = 520/692 (75.14%), Postives = 577/692 (83.38%), Query Frame = 0 Query: 121 EDGREDGRGGLPIVPYMGEKHMGRDYYSKRFRLLVQHMVEGGPPAAMLEENEERWVGLPSFQWKMAVVNFMNEVFLRPKETLGDEYMRILHAFDDVPGSVLGAFHNAMDAWHAKVRRHSFTMSGDKPPLPPLPLEFARVEQMLTPFILRRTSSASPPSLASSTAPSLASTD-HAEGEAGQ----GGREERLRHVAAMEEEERKEKKAMDLGQLVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEVLHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKE------GGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 E GR G G PY GEKH+GRDYYSKRFRLLVQ+MVEGGPP AM EE E R GLPSFQWKMAVVNFMN+ FL P++TL DEY+ +LHA DDVPG+V+G+FHN DAWHAKVRRHS+TMSG+KP LPPLP EF RVE +L PFI+R ++A P S APSLA + E+G+ GG +R+ A ++ERK K LGQLVRVCDMRLPHDWYPYARLMRRKI+YH GPTNSGKTYHALQRLK ADP KGGGLYLGPLRLLALE+YD LNE+GVYCSLLTGQEKRL+PFSDHTSATVEMC+L QDYDVAV+DEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEA +VV+RLCQATGD+LE R YERMTEL +A +PLLDYS+V GDCIVAF+KSDICSIKQEIEAKT HKCCMVYGSLPSETRSAQARIFNEEGTG+DVLVA+DAIGMGLNLNI+RIIFHSLIK SD+GGAEVLHSGMIKQIAGRAGRRSSRFP GEVTCYK EDM+FLR GLGTATEQIARAGLFP+ EQLEDF+ LL++QV R++ S G L E GR + RK +G L + F+++ G XXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPL+IAERY L SVPI++RDR AMQ+ Sbjct: 120 EGGRHGGHG----APYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDEYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLS-----APSLAGVEGEGREESGEETKLGGERQRMGESTA--DKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGS-GELGGEEGRWQQRK-KGLSSPLHASFFARDIGLEMNRGKKEENGKEXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQM 798
BLAST of NO17G02990 vs. NCBI_GenBank
Match: XP_005854133.1 (atp-dependent rna helicase [Nannochloropsis gaditana CCMP526] >EKU22226.1 atp-dependent rna helicase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 887.5 bits (2292), Expect = 3.500e-254 Identity = 496/755 (65.70%), Postives = 563/755 (74.57%), Query Frame = 0 Query: 58 RGCVSSSSSGXSSMTQLPSPPPVSAMGVEQPENSLPTTAREEKPTGLSSPPSSKGRIALEGGPEDGREDGRGGLPIVPYMGEKHMGRDYYSKRFRLLVQHMVEGGPPAAMLEENEERWVGLPSFQWKMAVVNFMNEVFLRPKETLGDEYMRILHAFDDVPGSVLGAFHNAMDAWHAKVRRHSFTMSGDKPPLPPLPLEFARVEQMLTPFILRRTSSASPPSLASSTAPSLASTD-HAEGEAGQ----GGREERLRHVAAMEEEERKEKKAMDLGQLVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEVLHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKE------GGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 RG ++ SS SS S +G E N + + E T + K R E E GR G G PY GEKH+GRDYYSKRFRLLVQ+MVEGGPP AM EE E R GLPSFQWKMAVVNFMN+ FL P++TL D+Y+ +LHA DDVPG+V+G+FHN DAWHAKVRRHS+TMSG+KP LPPLP EF RVE +L PFI+R ++A P S APSLA + E+G+ GG +++ A ++ERK K LGQLVRVCDMRLPHDWYPYARLMRRKI+YH GPTNSGKTYHALQRLK ADP KGGGLYLGPLRLLALE+YD LNE+GVYCSLLTGQEKRL+PFSDHTSATVEMC+L QDYDVAV+DEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEA +VV+RLCQATGD+LE R YERMTEL +A +PLLDYS+V GDCIVAF+KSDICSIKQEIEAKT HKCCMVYGSLPSETRSAQA IFNEEGTG+DVLVA+DAIGMGLNLNI+RIIFHSLIK SD+GGAEVLH SGLGTATEQIARAGLFP+ EQLEDF+ LL++QV R++ SG + +E R ++ +G + F+++ G XXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPL+IAERY L SVPI++RDR AMQ+ Sbjct: 63 RGALARHSSSSSSCQTAVSG---GDLGTETC-NKFSSLDKSEIITEVEGSKEIKERTDSE--EEGGRHGGHG----APYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDQYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLS-----APSLAGVEGEGREESGEETELGGERQQMGESTA--DKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQAGIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLH-----------------------------------SGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEE--ERWQQRKKGLSSPFHASFFARDIGLEMNRGKKEENGKEXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQM 763
BLAST of NO17G02990 vs. NCBI_GenBank
Match: XP_009516660.1 (hypothetical protein PHYSODRAFT_537681 [Phytophthora sojae] >EGZ29385.1 hypothetical protein PHYSODRAFT_537681 [Phytophthora sojae]) HSP 1 Score: 409.8 bits (1052), Expect = 2.100e-110 Identity = 207/475 (43.58%), Postives = 297/475 (62.53%), Query Frame = 0 Query: 328 LVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEV-LHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 L ++ D+RLPH+ YPYA M+R+I+YH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALE+Y+ +N DG+Y SL+TGQEK++VP+S H S TVEM N+++ +DVAV+DEIQ+IGDP+RG AWTRAL GL+AKEIH+CG EA +V + + TGDE E R+YER + L+++ L +YS +++GDC+VAF++ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ +++LVASDA+GMGLNLNI+R++F ++ K S G V + + + KQIAGRAGR S F +GE TC +ED+++L+ + AGLFP++EQ+E+F+ L G D L +++D + +A + Y MC + M A+ L + LT+++R+T C P++ R+ LA +V Sbjct: 93 LQQLTDLRLPHEMYPYATAMKRRIIYHEGPTNSGKTHQALERLKQAG--EDGGIYCGPLRLLALEIYERMNSDGLYTSLVTGQEKKIVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDEFELRSYERRSPLEISTTHLKNYSNIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGGSGGMVDIPASLAKQIAGRAGRYGSDFASGEATCLLEEDLEYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLP-----------------------------GITD-----------------------------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKV 500
BLAST of NO17G02990 vs. NCBI_GenBank
Match: KUF92474.1 (hypothetical protein AM588_10003757 [Phytophthora nicotianae]) HSP 1 Score: 409.5 bits (1051), Expect = 2.800e-110 Identity = 209/479 (43.63%), Postives = 296/479 (61.80%), Query Frame = 0 Query: 324 DLGQLVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEV-LHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 +L VR+ D+RLPH+ YPYA M+RKI+YH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALE+++ +N DG+Y SL+TGQEK+LVP+S H S TVEM N+++ +DVAV+DEIQ+IGDP+RG AWTRAL GL+AKEIH+CG EA +V + + TGD+ E R+YER + L++A L YS +++GDC+VAF++ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ +++LVASDA+GMGLNLNI+R++F ++ K S G + + + KQIAGRAGR S F +GE TC +ED+ +L+ + AGLFP++EQ+E+F+ L G D L +++D + +A + Y MC + M A+ L + LT+++R+T C P++ R+ LA +V Sbjct: 48 ELLAFVRLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQAG--EDGGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGSYSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGRAGRYGSDFASGEATCLLEEDLGYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLP-----------------------------GITD-----------------------------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKV 459
BLAST of NO17G02990 vs. NCBI_GenBank
Match: OQR82729.1 (ATP-dependent RNA helicase SUPV3L1 [Achlya hypogyna]) HSP 1 Score: 409.1 bits (1050), Expect = 3.600e-110 Identity = 214/477 (44.86%), Postives = 286/477 (59.96%), Query Frame = 0 Query: 325 LGQLVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEVLHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 + L + D+RLPH WYP AR M+RKI+YHGGPTNSGKTY ALQRLK A+ +GGGLY GPLRLLALE+Y+ LN +GVYCSL+TG+EKR VP S H S TVEMC+ YDVAVVDEIQMIGDPERG AWTRAL L+AKEIH+CG EA D+V + + TGDE E + YER + L + + L Y +++ GDC+V F++ + IK+EIE T +CC++YG LP ETRS QAR+FNE GYDVLVASDAIGMGLNLNI+RI+F S++K D + S + KQIAGRAGR S + +G T D+ F+ A + AGLFP++EQ+ +F+ + +TT L +++D + ++A + Y MC+ + A+ L ++K + + ER+T C P+N R+ L+ ++ Sbjct: 175 IASLQELTDLRLPHTWYPKARAMQRKIIYHGGPTNSGKTYEALQRLKMAE--EGGGLYCGPLRLLALEIYETLNMNGVYCSLVTGEEKREVPMSTHVSCTVEMCSAGTTYDVAVVDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVDLVRKFAEITGDEFELKTYERRSPLAIEKSALGSYGKIRKGDCVVGFSRRRVFQIKREIEMATGLRCCIIYGQLPPETRSQQARLFNEPDNGYDVLVASDAIGMGLNLNIRRIVFDSVLK-YDGADMVDISSSLTKQIAGRAGRSGSDYSHGLATTLAPNDLSFVHGAYHEAPATLTAAGLFPSSEQMVEFAKQMP--------------------------------ETT--------------------------------DLGQLLDKYVSLARLDGAYFMCKFADIKQAAALLVELK-MDLQERFTFCMAPVNLRNPLSRKI 583
BLAST of NO17G02990 vs. NCBI_GenBank
Match: POM66022.1 (ATP-dependent RNA helicase SUPV3L1 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 408.7 bits (1049), Expect = 4.700e-110 Identity = 208/475 (43.79%), Postives = 293/475 (61.68%), Query Frame = 0 Query: 328 LVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEV-LHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 L ++ D+RLPH+ YPYA M+RKI+YH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALE+Y+ +N DG+Y SL+TGQEK++VP+S H S TVEM N+++ +DVAV+DEIQ+IGDP+RG AWTRAL GL+A EIH+CG EA +V + + TGDE E R+YER + L++A L YS +Q GDC+VAF++ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ +++LVASDA+GMGLNLNI+R++F ++ K S G + + S + KQIAGRAGR S F +G TC +ED+++L+ + AGLFP++EQ+E+F+ L G D L +++D + +A + Y MC + M A+ L + LT+++R+T C P++ R+ LA +V Sbjct: 92 LQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQAG--EDGGIYCGPLRLLALEIYERMNSDGLYTSLVTGQEKKIVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQANEIHVCGSGEAVHLVKKFAETTGDEFELRSYERRSPLEIAPKHLESYSHIQPGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPSSLAKQIAGRAGRYGSDFASGVATCLLEEDLEYLKESYDEVPTALTSAGLFPSSEQMEEFAKQLP-----------------------------GITD-----------------------------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKV 499
BLAST of NO17G02990 vs. NCBI_GenBank
Match: XP_002901294.1 (ATP-dependent RNA helicase SUPV3L1, putative [Phytophthora infestans T30-4] >EEY58821.1 ATP-dependent RNA helicase SUPV3L1, putative [Phytophthora infestans T30-4]) HSP 1 Score: 407.9 bits (1047), Expect = 8.100e-110 Identity = 207/475 (43.58%), Postives = 295/475 (62.11%), Query Frame = 0 Query: 328 LVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEV-LHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 L ++ D+RLPH+ YP+A M+RKI+YH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALE+++ LN DG+Y SL+TGQEK+LVP+S H S TVEM N+++ +DVAVVDEIQ+IGDP+RG AWTRAL GL+A EIH+CG EA +V + + TGD+ E R+YER + L++A L YS +++GDC+VAF++ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ +++LVASDAIGMGLNLNI+R++F ++ K S G + + + KQIAGRAGR S F +GE TC +ED+++L+ + AGLFP++EQ+E+F+ R G+ + L +++D + +A + Y MC + M A+ L + + LT+++R+T C P+ R+ LA +V Sbjct: 240 LQQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTHQALERLKQAG--EDGGIYCGPLRLLALEIFERLNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVVDEIQLIGDPQRGWAWTRALFGLQANEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPTHLASYSHIRSGDCVVAFSRRDIFQIKRDIEVKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAIGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGRAGRYGSDFASGEATCVLEEDLEYLKESYDEVPTPLTSAGLFPSSEQMEEFA----------RQLPGITD------------------------------------------------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRETE-LTLSDRFTFCMSPVGLRNPLARRV 647
BLAST of NO17G02990 vs. NCBI_GenBank
Match: XP_008894918.1 (hypothetical protein PPTG_04427 [Phytophthora parasitica INRA-310] >ETI39044.1 hypothetical protein F443_15330 [Phytophthora parasitica P1569] >ETK79238.1 hypothetical protein L915_14882 [Phytophthora parasitica] >ETL32659.1 hypothetical protein L916_14786 [Phytophthora parasitica] >ETL85927.1 hypothetical protein L917_14599 [Phytophthora parasitica] >ETM39068.1 hypothetical protein L914_14739 [Phytophthora parasitica] >ETN18997.1 hypothetical protein PPTG_04427 [Phytophthora parasitica INRA-310] >ETP08941.1 hypothetical protein F441_15150 [Phytophthora parasitica CJ01A1] >ETP36989.1 hypothetical protein F442_15174 [Phytophthora parasitica P10297] >KUF76296.1 ATP-dependent RNA helicase SUPV3L1 [Phytophthora nicotianae]) HSP 1 Score: 406.4 bits (1043), Expect = 2.400e-109 Identity = 207/475 (43.58%), Postives = 294/475 (61.89%), Query Frame = 0 Query: 328 LVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEV-LHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 L ++ D+RLPH+ YPYA M+RKI+YH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALE+++ +N DG+Y SL+TGQEK+LVP+S H S TVEM N+++ +DVAV+DEIQ+IGDP+RG AWTRAL GL+AKEIH+CG EA +V + + TGD+ E R+YER + L++A L YS +++GDC+VAF++ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ +++LVASDA+GMGLNLNI+R++F ++ K S G + + + KQIAGRAGR S F +GE TC +ED+ +L+ + AGLFP++EQ+E+F+ L G D L +++D + +A + Y MC + M A+ L + LT+++R+T C P++ R+ LA +V Sbjct: 178 LQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQAG--EDGGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGSYSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGRAGRYGSDFASGEATCLLEEDLGYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLP-----------------------------GITD-----------------------------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKV 585
BLAST of NO17G02990 vs. NCBI_GenBank
Match: ETO67780.1 (hypothetical protein F444_15334 [Phytophthora parasitica P1976]) HSP 1 Score: 404.4 bits (1038), Expect = 8.900e-109 Identity = 206/475 (43.37%), Postives = 294/475 (61.89%), Query Frame = 0 Query: 328 LVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEV-LHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 L ++ D+RLPH+ YPYA M+RKI+YH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALE+++ +N DG+Y SL+TGQEK+LVP+S H S TVEM N+++ +DVAV+DEIQ+IG+P+RG AWTRAL GL+AKEIH+CG EA +V + + TGD+ E R+YER + L++A L YS +++GDC+VAF++ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ +++LVASDA+GMGLNLNI+R++F ++ K S G + + + KQIAGRAGR S F +GE TC +ED+ +L+ + AGLFP++EQ+E+F+ L G D L +++D + +A + Y MC + M A+ L + LT+++R+T C P++ R+ LA +V Sbjct: 178 LQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQAG--EDGGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGNPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGSYSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGRAGRYGSDFASGEATCLLEEDLGYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLP-----------------------------GITD-----------------------------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKV 585
BLAST of NO17G02990 vs. NCBI_GenBank
Match: XP_012195770.1 (hypothetical protein SPRG_22092 [Saprolegnia parasitica CBS 223.65] >KDO33606.1 hypothetical protein SPRG_22092 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 403.3 bits (1035), Expect = 2.000e-108 Identity = 212/477 (44.44%), Postives = 283/477 (59.33%), Query Frame = 0 Query: 325 LGQLVRVCDMRLPHDWYPYARLMRRKIVYHGGPTNSGKTYHALQRLKAADPTKGGGLYLGPLRLLALEVYDALNEDGVYCSLLTGQEKRLVPFSDHTSATVEMCNLHQDYDVAVVDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEARDVVTRLCQATGDELEFRNYERMTELKVAEDPLLDYSQVQAGDCIVAFNKSDICSIKQEIEAKTRHKCCMVYGSLPSETRSAQARIFNEEGTGYDVLVASDAIGMGLNLNIKRIIFHSLIKGSDDGGAEVLHSGMIKQIAGRAGRRSSRFPNGEVTCYKKEDMQFLRSGLGTATEQIARAGLFPTAEQLEDFSILLQTQVERVRSSGGMLEDETGRRRGRKGRGQLGALDTTLFSKEGGXXXXXXXXXXXXXXXXXXXXXXXGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLTIAERYTLCSVPINTRDRLAMQV 802 + L + D+RLPH W+P AR ++RKI+YHGGPTNSGKTY ALQRLK A+ GGGLY GPLRLLALE+Y+ LN GVY SL+TG+EKR VP S H + TVEMC+ Q YDVAV+DEIQMIGDPERG AWTRAL L+AKEIH+CG EA D+V + Q TGDE E + YER + L + + L Y++++ GDC+V F++ + IK EIE T +CC++YG LP ETRS QAR+FNE GYDVLVASDAIGMGLNLNI+RI+F S++K D + S + KQIAGRAGR S + +G T D+ F++ A + AGLFPT+EQ+ +F+ + +TT L +++D + ++A + Y MC+ + A+ L K + + ER+T C P+N R+ L+ ++ Sbjct: 162 IASLQELTDLRLPHTWFPKARALQRKIIYHGGPTNSGKTYEALQRLKMAE--DGGGLYCGPLRLLALEIYETLNMAGVYTSLVTGEEKREVPMSTHVACTVEMCSAGQSYDVAVIDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVDLVRKFAQVTGDEFELKTYERRSPLSIEKAALGSYAKIRKGDCVVGFSRRRVFQIKHEIEKATGLRCCIIYGQLPPETRSQQARLFNEPDNGYDVLVASDAIGMGLNLNIRRIVFDSVLK-FDGADMVDISSSLTKQIAGRAGRSGSDYNHGLATTLAPNDLSFVQGAYHEAPSALTAAGLFPTSEQMVEFAKQMP--------------------------------ETT--------------------------------DLGQLLDKYVSLARLDGAYFMCKFADIKQAAALLVDFK-MDLQERFTFCMAPVNLRNPLSRKI 570 The following BLAST results are available for this feature:
BLAST of NO17G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02990 ID=NO17G02990|Name=NO17G02990|organism=Nannochloropsis oceanica|type=gene|length=7018bpback to top protein sequence of NO17G02990.4 >NO17G02990.4-protein ID=NO17G02990.4-protein|Name=NO17G02990.4|organism=Nannochloropsis oceanica|type=polypeptide|length=900bpback to top protein sequence of NO17G02990.3 >NO17G02990.3-protein ID=NO17G02990.3-protein|Name=NO17G02990.3|organism=Nannochloropsis oceanica|type=polypeptide|length=885bpback to top protein sequence of NO17G02990.2 >NO17G02990.2-protein ID=NO17G02990.2-protein|Name=NO17G02990.2|organism=Nannochloropsis oceanica|type=polypeptide|length=975bpback to top protein sequence of NO17G02990.1 >NO17G02990.1-protein ID=NO17G02990.1-protein|Name=NO17G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1111bpback to top Synonyms
Publications
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