NO17G02320, NO17G02320 (gene) Nannochloropsis oceanica

Overview
NameNO17G02320
Unique NameNO17G02320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3579
Alignment locationchr17:682710..686288 -

Link to JBrowse

Properties
Property NameValue
Description1-deoxy-D-xylulose 5-phosphate reductoisomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:682710..686288 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:00306041-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GO:0005515protein binding
GO:0070402NADPH binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036169DXPR_C_sf
IPR036291NAD(P)-bd_dom_sf
IPR003821DXP_reductoisomerase
IPR026877DXPR_C
IPR013644DXP_reductoisomerase_C
IPR013512DXP_reductoisomerase_N
Homology
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: CBJ29720.1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 587.0 bits (1512), Expect = 4.900e-164
Identity = 283/415 (68.19%), Postives = 344/415 (82.89%), Query Frame = 0 
Query:   34 AAPSNTAESLRQTVDLALSPESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKL 449
            A+P NT E+ ++T+DLAL     K+KI+LLGSTGSIGTQTLDI  E+ + +EV +LAAG+N+DLLA+QI  F+P + SV  E  +PAL+ +L+++GV  ++ P + +G +G++A A   DAD VVTGIVGCAGL+PTVEAIK +KTIALANKETLI+GGPA++PLLK+YGV+++PADSEHSAIFQ LQG PPG LRRIILTASGGAFRDWP  DL KVTVADAL HPNWDMGAKITVDSATMMNKGLEVIEAHYLFG  YDDID+V+HP+SIIHS++E QDTS+IGQLGWPDMRLP+LYS+SWPHR+ M+Y  LDL  L  +TFK PD  KYPCI LAYAAGR GG+MTAA+NAANERANEIFR+E I ++DI +V+E  ME+HK D    PS+EDI+ VD WAR +VDE A +L
Sbjct:   10 ASPVNTRETFQRTMDLALEETGAKKKIALLGSTGSIGTQTLDICREKPENFEVVSLAAGSNVDLLAKQIALFKPKMVSVATEDLVPALRERLSDMGVRGADLPTVTSGAEGIVATACHDDADTVVTGIVGCAGLLPTVEAIKRKKTIALANKETLIAGGPAVLPLLKEYGVDMVPADSEHSAIFQCLQGFPPGALRRIILTASGGAFRDWPAADLAKVTVADALTHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGADYDDIDIVVHPESIIHSMVEAQDTSVIGQLGWPDMRLPLLYSLSWPHRVRMSYDKLDLAKLSKMTFKEPDRVKYPCIDLAYAAGREGGSMTAAMNAANERANEIFRKEVISFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQL 424
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: ACI45960.1 (putative plastid 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Pyropia yezoensis])

HSP 1 Score: 532.3 bits (1370), Expect = 1.400e-147
Identity = 262/420 (62.38%), Postives = 331/420 (78.81%), Query Frame = 0 
Query:   32 GHAAPSNTAESLRQTVDLALSPESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLNYV 452
            G AAP NT  S RQT++ ALS  + K++I+LLGSTGSIGTQTLDIV    D + +  LAAG N+DLL +Q   FRPAI +++D S+  AL+A LT+ GV      E+ AG++GV+A A   DADVVVTGIVG AGL PT+ AI+A K IALANKETLI+GGP ++PLLK++GV + PADSEHSAIFQ LQG P   L ++ILTASGGAFRDW   DL+KV ++DALKHPNW MGAKIT+DSATMMNKGLEVIEAHYLFG AYDDID+V+HPQSI+HS++E  DTS+I QLGWPDMRLP+LY+I+WP R+ M Y+ LDLV +G+LTF+APD+ KYPCI+LAYAAGR GG+ TA +NAANE A E+FRQ+K+ YL I K++E T+++H+ DW   PSL+DI+A+D++AR  V+   +   Y+
Sbjct:   10 GAAAPVNTDASARQTLERALSGLALKKRITLLGSTGSIGTQTLDIVAACPDAFSIVGLAAGGNVDLLVEQAVLFRPAIVAIRDASKYGALRAALTDAGVT----CEVVAGEEGVVAVAAYGDADVVVTGIVGVAGLQPTLAAIRAGKDIALANKETLIAGGPVVLPLLKEHGVTMTPADSEHSAIFQCLQGAPADSLSKVILTASGGAFRDWNAADLEKVQLSDALKHPNWSMGAKITIDSATMMNKGLEVIEAHYLFGAAYDDIDIVVHPQSIVHSMVEMADTSVIAQLGWPDMRLPLLYAIAWPARVSMPYERLDLVKVGALTFRAPDHAKYPCIELAYAAGRLGGSATAVINAANEAAVELFRQDKVHYLAIPKLIEATLDAHRSDWLANPSLDDIVALDSYARTVVNGFVDAGRYL 425
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: CEL93618.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 532.3 bits (1370), Expect = 1.400e-147
Identity = 282/446 (63.23%), Postives = 346/446 (77.58%), Query Frame = 0 
Query:    6 AMGGLIAFLSVGSDAFSRPS-------PVTMSI---GHAAPSNTAESLRQTVDLALS-PESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMN-YKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWK-EMPSLEDIIAVDAWAR 439
            A+ G+ AF SV      RP+       P+  S+    HAAP+ + ES++ T D A +  ES KR+ISLLGSTGSIGTQTLDI+ ER   +E+  LAA +N++LLA+QI++FRPA+ +++D S+L AL+A L  +     + P L  G DGV   A    AD+VVTGIVGCAGL+PT+ AI+  K +ALANKETLI+ GP IVPLLK++GV + PADSEHSAIFQ LQGVPPGGLR+IILTASGGAFRDW  EDL  V V DALKHPNW MGAKIT+DSAT+MNKGLEVIEAHYLFG +YDDI+VVIHPQSIIHS++ETQDTS++ QLGWPDMRLP++Y++SWPHRIPM+ Y+ LDLV LGSLTFKAPD  KYPC++LAY AGR GGTM AALNAANE A E FRQ +I YL+I K++E  M++H+ D K E  +L+DI+AVDAWAR
Sbjct:   27 AVKGVAAFTSVPHQRSLRPALLSTRRRPIASSLTRMAHAAPTGSEESMKATFDEATNGVESFKRRISLLGSTGSIGTQTLDIIRERPQNFELVGLAARSNVELLAEQIREFRPAMVALEDGSKLGALEALLEGM---EGDRPTLVTGMDGVCEVAKMDQADMVVTGIVGCAGLLPTIAAIENGKDVALANKETLIAAGPVIVPLLKKHGVFMTPADSEHSAIFQCLQGVPPGGLRKIILTASGGAFRDWRKEDLVNVRVEDALKHPNWAMGAKITIDSATLMNKGLEVIEAHYLFGASYDDIEVVIHPQSIIHSMVETQDTSVLAQLGWPDMRLPLVYAMSWPHRIPMHAYERLDLVKLGSLTFKAPDFDKYPCLRLAYEAGRMGGTMPAALNAANEMAVERFRQGEIHYLEIPKLIEFVMDAHRGDHKTEGITLDDILAVDAWAR 469
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: AUJ59070.1 (plastid 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Pyropia haitanensis])

HSP 1 Score: 530.8 bits (1366), Expect = 4.200e-147
Identity = 262/420 (62.38%), Postives = 330/420 (78.57%), Query Frame = 0 
Query:   32 GHAAPSNTAESLRQTVDLALSPESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLNYV 452
            G AAP NT  S RQT++ ALS  + K++I+LLGSTGSIGTQTLDIV    D + +  LAAG N+DLL +Q   FRPAI +++D S+  AL+A LT+ GV      E+ AG++GV+A A   DADVVVTGIVG AGL PT+ AI+A K IALANKETLI+GGP ++PLLK++GV + PADSEHSAIFQ LQG P   L ++ILTASGGAFRDW   DL+KV ++DALKHPNW MGAKIT+DSATMMNKGLEVIEAHYLFG AYDDID+V+HPQSI+HS++E  DTS+I QLGWPDMRLP+LY+I+WP R+ M Y+ LDLV +G+LTF+APD  KYPCI+LAYAAGR GG+ TA +NAANE A E+FRQ+K+ YL I K++E T+++H+ DW   PSL+DI+A+D++AR  V+   +   Y+
Sbjct:   10 GAAAPVNTDASARQTLERALSGLALKKRITLLGSTGSIGTQTLDIVAACPDAFSIVGLAAGGNVDLLVEQAVLFRPAIVAIRDASKYGALRAALTDAGVT----CEVVAGEEGVVAVAAYGDADVVVTGIVGVAGLQPTLAAIRAGKDIALANKETLIAGGPVVLPLLKEHGVTMTPADSEHSAIFQCLQGAPADSLSKVILTASGGAFRDWNAADLEKVQLSDALKHPNWSMGAKITIDSATMMNKGLEVIEAHYLFGAAYDDIDIVVHPQSIVHSMVEMADTSVIAQLGWPDMRLPLLYAIAWPARVSMPYERLDLVKVGALTFRAPDLAKYPCIELAYAAGRLGGSATAVINAANEAAVELFRQDKVHYLAIPKLIEATLDAHRSDWLANPSLDDIVALDSYARTVVNGFVDAGRYL 425
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: ABI96275.1 (chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Pyropia yezoensis])

HSP 1 Score: 530.0 bits (1364), Expect = 7.100e-147
Identity = 261/420 (62.14%), Postives = 330/420 (78.57%), Query Frame = 0 
Query:   32 GHAAPSNTAESLRQTVDLALSPESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLNYV 452
            G AAP NT  S RQT++ ALS  + K++I+LLGSTGSIGTQTLDIV    D + +  LAA  N+DLL +Q   FRPAI +++D S+  AL+A LT+ GV      E+ AG++GV+A A   DADVVVTGIVG AGL PT+ AI+A K IALANKETLI+GGP ++PLLK++GV + PADSEHSAIFQ LQG P   L ++ILTASGGAFRDW   DL+KV ++DALKHPNW MGAKIT+DSATMMNKGLEVIEAHYLFG AYDDID+V+HPQSI+HS++E  DTS+I QLGWPDMRLP+LY+I+WP R+ M Y+ LDLV +G+LTF+APD+ KYPCI+LAYAAGR GG+ TA +NAANE A E+FRQ+K+ YL I K++E T+++H+ DW   PSL+DI+A+D++AR  V+   +   Y+
Sbjct:   10 GAAAPVNTDASARQTLERALSGLALKKRITLLGSTGSIGTQTLDIVAACPDAFSIVGLAADGNVDLLVEQAALFRPAIVAIRDASKYGALRAALTDAGVT----CEVVAGEEGVVAVAAYGDADVVVTGIVGVAGLQPTLAAIRAGKDIALANKETLIAGGPVVLPLLKEHGVTMTPADSEHSAIFQCLQGAPADSLSKVILTASGGAFRDWNAADLEKVQLSDALKHPNWSMGAKITIDSATMMNKGLEVIEAHYLFGAAYDDIDIVVHPQSIVHSMVEMADTSVIAQLGWPDMRLPLLYAIAWPARVSMPYERLDLVKVGALTFRAPDHAKYPCIELAYAAGRLGGSATAVINAANEAAVELFRQDKVHYLAIPKLIEATLDAHRSDWLANPSLDDIVALDSYARTVVNGFVDAGRYL 425
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: XP_005824263.1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase [Guillardia theta CCMP2712] >EKX37283.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Guillardia theta CCMP2712])

HSP 1 Score: 529.6 bits (1363), Expect = 9.300e-147
Identity = 278/453 (61.37%), Postives = 334/453 (73.73%), Query Frame = 0 
Query:   10 LIAFLSVGSDAFSRPSPVTM------------SIGHAAPSNTAESLRQTVDLALSPESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVAD-------ALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDE 444
            L+ F    SDAF  P+ V++            S   AAP  T E L+  VD A    + K+K++LLGSTGSIGTQTLDIV    + +E+  LAAG N+ LLAQQIK+F P I SV+DES L  LK  L+       + PEL  G  G+   A   D+DVVVTGIVGCAGL+PTVEAIKA K IALANKETLISGGP I+PLLK+YGV + PADSEHSAIFQSLQGVPPGGLR++ILTASGGAFRD+  ++L ++   D       A  HPNWDMGAKITVDSAT+MNKGLEVIEAHYLFG +YDDI+VV+HPQSI+HS IET+D+S+IGQLGWPDMRLP++YS+SWP+R+ M Y+PLD   LG +TF APD KKYP + L+Y+AGR GGTMTA LNAANE+ANE+FR  +IGYLDI KV+E  ME+HK D    PSL+DI+ +D WAR  V E
Sbjct:    9 LVVFGCSCSDAFIVPASVSLARKGLGVRMSSASQQGAAPFGTVEDLQHVVDEAAKGLNWKKKVTLLGSTGSIGTQTLDIVKNVPERFEIEGLAAGGNVALLAQQIKEFNPKIVSVRDESVLKELKEALSGWN---GKMPELVFGPKGIAEVAKYGDSDVVVTGIVGCAGLLPTVEAIKAGKDIALANKETLISGGPVILPLLKEYGVKMTPADSEHSAIFQSLQGVPPGGLRKVILTASGGAFRDFSADELLELCEKDPEFIRKKATTHPNWDMGAKITVDSATLMNKGLEVIEAHYLFGVSYDDIEVVVHPQSILHSAIETRDSSVIGQLGWPDMRLPLVYSMSWPYRLEMPYEPLDFAKLGKMTFMAPDRKKYPSLDLSYSAGRTGGTMTAVLNAANEQANEMFRNGEIGYLDIFKVIEKAMEAHKSDLSMKPSLDDIVEIDGWARNFVKE 458
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: WP_009787067.1 (1-deoxy-D-xylulose-5-phosphate reductoisomerase [Lyngbya sp. PCC 8106] >EAW34352.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lyngbya sp. PCC 8106])

HSP 1 Score: 521.9 bits (1343), Expect = 1.900e-144
Identity = 263/396 (66.41%), Postives = 310/396 (78.28%), Query Frame = 0 
Query:   58 RKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLNYVAA 454
            + I+LLGSTGSIGTQTLDIV +  D + +  LAA  N+ LLA+QI+ FRP IA++ DES+LP LKA +  L       P L AG+ GV+  A   D++ VVTGIVGCAGL+PT+ AIKA K IALANKETLI+GGP + PL+++YGV ++PADSEHSAIFQ LQGVP  GLRRIILTASGGAFRDWPVE L  V VADA+KHPNW MG KITVDSATMMNKGLEVIEAH+LFG  YD+ID+VIHPQSIIHSLIE QDTS++ QLGWPDMRLP+LY++SWP RI  N++PLDLV  G+LTFKAPDN KYPC+ LAYAAGRAGGTM A LNAANE+A  +F  EKIG+L+I KV+E   + H+ D  + PSLEDIIAVD WAR  V     KL+   A
Sbjct:    2 KAITLLGSTGSIGTQTLDIVNDHPDKFRIVGLAARRNVTLLAEQIRTFRPQIAAICDESKLPELKAAIANL----DPQPILLAGESGVVEVARYGDSEAVVTGIVGCAGLLPTLAAIKAGKDIALANKETLIAGGPVVNPLIQEYGVKLLPADSEHSAIFQCLQGVPEKGLRRIILTASGGAFRDWPVEKLADVKVADAIKHPNWSMGRKITVDSATMMNKGLEVIEAHFLFGLDYDNIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYAMSWPERIYTNWEPLDLVKAGNLTFKAPDNHKYPCMSLAYAAGRAGGTMPAVLNAANEQAVALFLDEKIGFLEIPKVIEYVCDRHQTDNSQNPSLEDIIAVDQWARQEVIAAQTKLSQTVA 393
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: WP_039726023.1 (1-deoxy-D-xylulose-5-phosphate reductoisomerase [Lyngbya confervoides] >KIF14299.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Aphanocapsa montana BDHKU210001] >KIF39233.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lyngbya confervoides BDU141951])

HSP 1 Score: 521.9 bits (1343), Expect = 1.900e-144
Identity = 254/391 (64.96%), Postives = 315/391 (80.56%), Query Frame = 0 
Query:   58 RKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKL 449
            + I+LLGSTGSIGTQTLDI+    + + +  +AAGNN++LLAQQ++QF+P I ++ + S+LP L+A L +L       P + AG DGV+  A   DA+ VVTGIVGCAGL+PT+ AI+A K IALANKETLI+GGPA++PL++++GV ++PADSEHSAIFQ LQGVP GGLRRIILTASGGAFRDWPV+ L +VTVADALKHPNW MG KITVDSAT+MNKGLEVIEAHYLFG  YDDID+VIHPQSIIHSLIE QDTS++ QLGWPDMRLP+LY+ISWP R+  +++PLDLV  G+LTF+ PD+ KYPC+ LAYAAGRAGGTMTA LNAANE+A E+F  EKI YL+I KV+E   + H+ D    P L+DI+ VD WAR+   E+++ L
Sbjct:    2 KAITLLGSTGSIGTQTLDILESHPEDFRLVGIAAGNNVELLAQQVRQFKPEIVAICNASKLPDLQAALADL----DPQPIILAGDDGVVEVARYGDAEAVVTGIVGCAGLLPTLAAIEAGKDIALANKETLIAGGPAVLPLVEKHGVKLLPADSEHSAIFQCLQGVPNGGLRRIILTASGGAFRDWPVDKLPQVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGQDYDDIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYAISWPDRVYTDWEPLDLVKAGTLTFREPDHAKYPCMDLAYAAGRAGGTMTAVLNAANEKAVELFLDEKISYLEIPKVIERVCDRHRDDLVAQPVLQDILTVDQWARIAATEVSQNL 388
[Close]
BLAST of NO17G02320 vs. NCBI_GenBank
Match: WP_015171312.1 (1-deoxy-D-xylulose-5-phosphate reductoisomerase [Geitlerinema sp. PCC 7407] >AFY65745.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Geitlerinema sp. PCC 7407])

HSP 1 Score: 520.4 bits (1339), Expect = 5.600e-144
Identity = 253/392 (64.54%), Postives = 317/392 (80.87%), Query Frame = 0 
Query:   58 RKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLN 450
            + I+LLGSTGSIGTQTLDIV+E  D + V  +AAG N+ +LAQQI+QFRP I ++ D+ +LP LKA + +L       P + AG++GVI  A   D++ VVTGIVGCAGL+PT+ AI+A K IALANKETLI+GGP ++PL+++YGV ++PADSEHSAIFQ LQGVP GGLRRIILTASGGAFRDWPVE L +VTVADALKHPNW MG KITVDSAT+MNKGLEVIEAHYLFG  YD ID+VIHPQSIIHSLIE QDTS++ QLGWPDMRLP+LY++SWP RI  +++PLDLV  G LTF+APD++KYPC+QLAYAAGRA G+M A LNAANE+A  +F +EKI +L+I +++E   + H+ D ++ P+L+DI+  DAWAR  V +  E+L+
Sbjct:    2 KAITLLGSTGSIGTQTLDIVSEHPDQFRVVGMAAGRNVAMLAQQIRQFRPEIVAIWDKDKLPELKAAIADL----EPQPIVLAGEEGVIEVARYGDSEAVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLIEKYGVKLLPADSEHSAIFQCLQGVPQGGLRRIILTASGGAFRDWPVEKLAEVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGMDYDHIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYAMSWPERIATSWEPLDLVKAGDLTFRAPDHQKYPCMQLAYAAGRAAGSMPAVLNAANEQAVALFLEEKIQFLEIPRLIEAVCDRHQADNRQQPTLDDILQADAWARQAVLQACEQLH 389
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BLAST of NO17G02320 vs. NCBI_GenBank
Match: WP_023067885.1 (1-deoxy-D-xylulose-5-phosphate reductoisomerase [Lyngbya aestuarii] >ERT05858.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lyngbya aestuarii BL J])

HSP 1 Score: 519.6 bits (1337), Expect = 9.600e-144
Identity = 260/392 (66.33%), Postives = 310/392 (79.08%), Query Frame = 0 
Query:   58 RKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQQIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACATEKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLKQYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKKVTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVIHPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLVALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEKIGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLN 450
            + I+LLGSTGSIGTQTLDIV +  D + +  LAA  N+ LLA+QI+ FRP IA++ DE++LP LKA +  L       P L AG+ GV+  A   D++ VVTGIVGCAGL+PT+ AIKA K IALANKETLI+GGP + PL+++YGV ++PADSEHSAIFQ LQGVP  GLRRIILTASGGAFRDWPVE L +V VADA+KHPNW MG KITVDSATMMNKGLEVIEAH+LFG  YD+ID+VIHPQSIIHSLIE QDTS++ QLGWPDMRLP+LY++SWP RI  +++ LDLV  G+LTFKAPDN KYPC+ LAYAAGRAGGTM A LNAANE+A  +F  EKIG+LDI KV+E   + H+ D  + PSL+DIIAVD WAR  V  +  KLN
Sbjct:    2 KAITLLGSTGSIGTQTLDIVNDHPDKFRIVGLAARRNVTLLAEQIRTFRPQIAAICDETKLPELKAAIANL----DPQPILLAGESGVVEVARYGDSETVVTGIVGCAGLLPTLAAIKAGKDIALANKETLIAGGPVVNPLIQEYGVKLLPADSEHSAIFQCLQGVPEKGLRRIILTASGGAFRDWPVEKLAEVKVADAIKHPNWSMGRKITVDSATMMNKGLEVIEAHFLFGLDYDNIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYAMSWPERIYTDWEQLDLVKAGNLTFKAPDNHKYPCMSLAYAAGRAGGTMPAVLNAANEQAVALFLDEKIGFLDIPKVIESVCDRHQTDNSQNPSLDDIIAVDQWARQEVLAVKTKLN 389
The following BLAST results are available for this feature:
BLAST of NO17G02320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ29720.14.900e-16468.191-deoxy-D-xylulose 5-phosphate reductoisomerase, c... [more]
ACI45960.11.400e-14762.38putative plastid 1-deoxy-D-xylulose 5-phosphate re... [more]
CEL93618.11.400e-14763.23unnamed protein product [Vitrella brassicaformis C... [more]
AUJ59070.14.200e-14762.38plastid 1-deoxy-D-xylulose 5-phosphate reductoisom... [more]
ABI96275.17.100e-14762.14chloroplast 1-deoxy-D-xylulose 5-phosphate reducto... [more]
XP_005824263.19.300e-14761.371-deoxy-D-xylulose 5-phosphate reductoisomerase [G... [more]
WP_009787067.11.900e-14466.411-deoxy-D-xylulose-5-phosphate reductoisomerase [L... [more]
WP_039726023.11.900e-14464.961-deoxy-D-xylulose-5-phosphate reductoisomerase [L... [more]
WP_015171312.15.600e-14464.541-deoxy-D-xylulose-5-phosphate reductoisomerase [G... [more]
WP_023067885.19.600e-14466.331-deoxy-D-xylulose-5-phosphate reductoisomerase [L... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02320.1NO17G02320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533301gene_9296Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02320.1NO17G02320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02320 ID=NO17G02320|Name=NO17G02320|organism=Nannochloropsis oceanica|type=gene|length=3579bp
ATGCGTTCAGTAGCCGCCATGGGAGGCTTGATAGCCTTCCTGTCGGTGGG
CAGCGACGCTTTCAGCAGACCATCCCCCGTCACCATGTCCATTGGGCATG
CCGCACCCTgtacgtacacaatgcctgctactgtgattgctcggacgcgg
catgaaagtgagagctttctgccactgctgtcggacagatcctttcgcgt
actttttcccaacccgccgtgccactgtgccttactgatctcacacgtgc
acatgaatctgcatatacaaatgacacacgcctaaccttcaattaccccc
gcttttccccccccctctcgaactttccagCCAACACTGCCGAGTCTCTG
CGGCAGACAGTGGACCTTGCCCTCTCCCCGGAGAGCAAGAAGgtatgcac
ctccgtccctccctccgtccctccttccctccacttttcttactacactt
taattgataacattccccctgtttctttgcctactcatccgaagcgagat
ctctctgttggggtccacggcttttcaaggggggggggggcagaagcaga
cactctcattccatctttgctttcctctccacggctgttccttatgcctt
ctctctttttccttctctgtccacagCGCAAAATCTCTCTGTTGGGGTCC
ACGGGCTCTATCGGCACGCAGACCTTGGATATTGTCACGGAGCGCTCGGA
TATCTACGAGGTGACGGCCTTGGCTGCAGgtagggagggagggagggagg
gatggggagggcagatgggggaagaagattactgccttgacagggggagg
agagagagagagagagagagagagagagagggagagagggagggagggag
ggaaggaaggagcgaagcgaataagagagagaagaggaattgaagagaca
gataaagcgtgtagaggagccaatcgatgaaccacttcccctccctccct
ccctccctccctcccttccttccgtcctcccgtcttcctatcctccctcc
ccatcagGCAACAACATCGACCTTCTGGCTCAGCAAATTAAACAATTCCG
TCCCGCCATTGCCAGTGTGCAGGACGAAAGCCGTCTTCCAGCCCTCAAGG
CTAAATTGACTGAATTAGGCGTACCTCCTTCCGAGTGGCCCGAACTCGGG
GCAGGACAAGACGGTGTAATTGCATGTGCCACAGAGAAGGACGCGGATGT
GGTAGTGACGGGCATCGTGGGATGCGCGGGTTTGATACCCACGGTGGAAG
CGATCAAGgtacgtcttcattccctccctccctcccccccgccctctccc
caacggtggaagcgatttaggtacgtcccacttccccttcctcccttcct
ttcctccctaccaacatctcctcttctgagtgatacttactcggcacatt
ttcattcagtacatcctcgcctgaccacccccgctccctccctccccccc
gccctccagGCACGCAAGACCATCGCACTGGCCAACAAGGAGACGCTCAT
CAGCGGTGGGCCTGCCATTGTGCCCCTCCTCAAGCAATACGGCGTAAACG
TCATCCCGGCAGACAGCGAGCACAGCGCCATTTTCCAGTCGTTGCAGGGC
GTACCTCCGGGTGGCTTGAGGCGCATCATTTTGACGGCCTCGGGGGGAGC
CTTCCGTGACTGGCCGGTGGAGGACCTGAAGAAGgtgaggagggaaggga
gggagggagggagggagggagggaaagggagggaaacagccggatcctcc
gtcacatattcacccctccttctcgacctcactatctcccacctcttctc
atcctttgagtcgcggtggcggatgccctggagcatacccatttcccatt
ccctccctccctccctccctccctccctccttccttccttctttcctccc
tccttaccaacagGTGACGGTGGCAGATGCCCTAAAGCATCCGAATTGGG
ACATGGGCGCCAAAATCACTGTGGATAGgtgcgagtcctcccttccttcc
tccctccctccctcccttcccccctccctccctccctccctccttcttcc
tctatctttcctttttcccttccttccctccttctcttctcttttgtccc
tccctccctcccttcctccctccctccctccctcagcgccacgataatga
acaaggtgtgaagttgcaactgctccatttactcaatgacactcgtcctt
ccctccctccttccccccctccttccctccctccttccctccctccctcc
ctgcctccctcagTGCCACGATGATGAACAAGGGGTTGGAGGTGATCGAA
GCTCATTACCTCTTCGGAACGGCCTATGACGACATTGATGTGgtgggaag
ggaggaagggaaggagggaaggaaggagggagggagggagagagggaggg
agagaggaaaggggggaaggagggttcgaggacgacaatgactttgacta
tgtggagaaggaaagggagaaagggagaggtaattggacgcatacatctg
ctcatttctccttcctccctccctccctccctccctcccttcctccttgt
agGTCATTCACCCCCAGTCCATTATCCACTCGCTCATCGAGACCCAGGAC
ACGAGCATGATCGGCCAGCTCGgtacggagggagggagggagggaggaaa
gagtggtcgggcggttgatcgagaaacatcattctcacccgaggatgtgt
gatctatacacatgcgtgatccctccttccttcccactattcctcccttt
ctcccttgcctgacccaacatgcgccttcctatccctccctcccttcctc
cctcccttcctccctccctctctccctccctccctctctccctccagGCT
GGCCCGACATGCGCCTCCCCATCCTATACTCCATCTCGTGGCCGCATCGC
ATTCCTATGAATTATAAACCCTTAGATCTGGTGGCCCTCGGCTCCCTGAC
ATTCAAgtaaggacaccctccttccctccctccctccctccctcccttct
tttctttcctttctccctcccgcccttcttccctcgtttccccctcccat
ttatctgacccacttccttcctcttccctcccttcctcccccccacttcc
ctcacacacagAGCACCGGACAACAAGAAGTATCCATGCATTCAGCTTGC
CTACGCCGCAGGACGGGCAGGAGGCACCATGACTGCGGCCTTGAACGCGG
CCAATGAGAGGGCAAATGAGATTTTTAGACAGGAAAAGATCGGATACCTC
GACATTGgtgaggaggagggagggagggagggagggagggagggagggag
gatggttgctattaagaagaagcgggaaagccatgtctccttttcttctt
cattccttcccttctttatgttctccctagataccatatttttactgaca
gctcacacactacctccctccctccctccctcccagCCAAGGTGGTGGAG
GGCACGATGGAGAGCCACAAGAAGGATTGGAAGGAGATGCCCTCCCTCGA
GGACATAATTGCAGTCGATGCTTGGGCCCGGGTTCGTGTGGATGAGCTTG
CGGAGAAATTAAATTACGTGGCCGCGTAG
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protein sequence of NO17G02320.1

>NO17G02320.1-protein ID=NO17G02320.1-protein|Name=NO17G02320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MRSVAAMGGLIAFLSVGSDAFSRPSPVTMSIGHAAPSNTAESLRQTVDLA
LSPESKKRKISLLGSTGSIGTQTLDIVTERSDIYEVTALAAGNNIDLLAQ
QIKQFRPAIASVQDESRLPALKAKLTELGVPPSEWPELGAGQDGVIACAT
EKDADVVVTGIVGCAGLIPTVEAIKARKTIALANKETLISGGPAIVPLLK
QYGVNVIPADSEHSAIFQSLQGVPPGGLRRIILTASGGAFRDWPVEDLKK
VTVADALKHPNWDMGAKITVDSATMMNKGLEVIEAHYLFGTAYDDIDVVI
HPQSIIHSLIETQDTSMIGQLGWPDMRLPILYSISWPHRIPMNYKPLDLV
ALGSLTFKAPDNKKYPCIQLAYAAGRAGGTMTAALNAANERANEIFRQEK
IGYLDIAKVVEGTMESHKKDWKEMPSLEDIIAVDAWARVRVDELAEKLNY
VAA*
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Synonyms
Publications