NO17G02220, NO17G02220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02220 vs. NCBI_GenBank
Match: EWM24187.1 (paired amphipathic helix protein sin3b [Nannochloropsis gaditana]) HSP 1 Score: 248.8 bits (634), Expect = 9.200e-62 Identity = 224/550 (40.73%), Postives = 284/550 (51.64%), Query Frame = 0 Query: 249 IMQDALAYLELVQLTFRDRLDIYLTFLGVMRDFAAGTIDTAGVVSCISQLFQGQEALLRGFHNFLNGFSRADPVTSS------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKMKDAVMFMDLVKDVLKDRPEIYMQFLDVIQRFQEQRIDTPSL------IIEKEXXXXXXXXXXXXXXXXXXXXNG----------------------------DLQKNGAIKYMEQVQEIFGSQSDTYLEFLAVMKGFEAEQLSIGEVMGRVVGLFQDHEELLEGFKCFLPSEQRRHLAAXXXXXXXXPDPATGKEEGGAISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKGEXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLPQRVQKDL 741 +MQ+ALAYLELVQ TF + DIY +FL VMR+ G DT + +S+LFQGQ++LLRGF +FL+G DP S XXXXXXXXXXXXX V M+DAV++MD VK D+PE Y +FL++I+ FQ++ DT + I + G Q GAI++ +QV+ F +Q YLEFL VM+ F+ ++ IGEVM RV +FQDH LL+GF FLP + R + AXXXXXXXX G EE +DAL +MDRVR +F PEVYVAFL +M+ FQ L T GV++EVGRLF G + LL+GFNAFLP G MP XXXXXXXXXXXXXXXXXXXXXX A F++ V+ RFA++PA+YQTFLEVLQR E ++G +A+TV ELF G++DLL +F FLP V+ L Sbjct: 75 LMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARXXXXXXXXXXXXXXXXXXXXXXXXAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYR--MPAXXXXXXXXAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMP-SVPPSAPPFQRPSPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEG------------GLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAAL 609
BLAST of NO17G02220 vs. NCBI_GenBank
Match: EWM24186.1 (paired amphipathic helix protein sin3b [Nannochloropsis gaditana]) HSP 1 Score: 246.9 bits (629), Expect = 3.500e-61 Identity = 261/734 (35.56%), Postives = 332/734 (45.23%), Query Frame = 0 Query: 65 RGRDIPTGAPPVYQRLAFAGPLGLPPRTGSSGLSSLLSNPNTFKNFPSSFGVAGNSIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTFAMPGNSWGGLSKHPPFAPHTLPVPVPSSQXXXXXXXXXXXXXXXXXXXXXHPLVATAPVPNXXXXXXXXXXXXXXXXXXXFQLPIMQDALAYLELVQLTFRDRLDIYLTFLGVMRDFAAGTIDTAGVVSCISQLFQGQEALLRGFHNFLNGFSRADPVTSS------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKMKDAVMFMDLVKDVLKDRPEIYMQFLDVIQRFQEQRIDTPSL------IIEKEXXXXXXXXXXXXXXXXXXXXNG----------------------------DLQKNGAIKYMEQVQEIFGSQSDTYLEFLAVMKGFEAEQLSIGEVMGRVVGLFQDHEELLEGFKCFLPSEQRRHLAAXXXXXXXXPDPATGKEEGGAISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKGEXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLPQRVQKDL 741 R RD+P GAPPVYQR + G GL G G++SL +NPN+ SS G GS + + PG W + P ++LP PS P P +MQ+ALAYLELVQ TF + DIY +FL VMR+ G DT + +S+LFQGQ++LLRGF +FL+G DP S XXXXXXXXXXXXX V M+DAV++MD VK D+PE Y +FL++I+ FQ++ DT + I + G Q GAI++ +QV+ F +Q YLEFL VM+ F+ ++ IGEVM RV +FQDH LL+GF FLP + R + AXXXXXXXX G EE +DAL +MDRVR +F PEVYVAFL +M+ FQ L T GV++EVGRLF G + LL+GFNAFLP G MP XXXXXXXXXXXXXXXXXXXXXX A F++ V+ RFA++PA+YQTFLEVLQR E ++G +A+TV ELF G++DLL +F FLP V+ L Sbjct: 46 RPRDMPVGAPPVYQRPSLTG-AGLFTSAG-GGMASLFANPNSSLPAASS-NFQGLYSGS--------------------------------NAHLMNNNASKPGQDW---HRGLPPPSYSLPYNAPS------------------------PAFPGRP------------------SMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARXXXXXXXXXXXXXXXXXXXXXXXXAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYR--MPAXXXXXXXXAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMP-SVPPSAPPFQRPSPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEG------------GLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAAL 684
BLAST of NO17G02220 vs. NCBI_GenBank
Match: XP_007363323.1 (hypothetical protein DICSQDRAFT_178900 [Dichomitus squalens LYAD-421 SS1] >EJF63605.1 hypothetical protein DICSQDRAFT_178900 [Dichomitus squalens LYAD-421 SS1]) HSP 1 Score: 107.1 bits (266), Expect = 4.300e-19 Identity = 76/234 (32.48%), Postives = 104/234 (44.44%), Query Frame = 0 Query: 520 PDPATGKEEGGAISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPG-------RSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKG-EXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLP-QRVQK-DLARI 744 P+ G E +SDAL Y+D V++ F PEVY FL+IMK F+++L+DT GVIE V LF G+ L+QGFN FLP G + P P E PA+ FVQK++ R+A++PA YQ FL+ L + G+V + +L DL+ +F FLP +RVQK +LARI Sbjct: 68 PEQQGGGERPLNVSDALSYLDSVKLQFAEQPEVYNKFLDIMKDFKSQLIDTPGVIERVSNLFHGHPALIQGFNTFLPAGYRIETGDNADPNTITVTTPAGTTTQATNAAFKYGKQQTVTERVAETVNPEPEAPVVSQESLKPALEFVQKLRTRYANQPAVYQRFLKTLAESGNQGQSDISRMESWSVACLSARYPKGEVMTEIMDLLKDSPDLMRDFVQFLPDERVQKEELARI 301
BLAST of NO17G02220 vs. NCBI_GenBank
Match: PIL27770.1 (transporter [Ganoderma sinense ZZ0214-1]) HSP 1 Score: 106.3 bits (264), Expect = 7.400e-19 Identity = 75/234 (32.05%), Postives = 104/234 (44.44%), Query Frame = 0 Query: 520 PDPATGKEEGGAISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPG-------RSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKG-EXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLP-QRVQK-DLARI 744 P+ G + +SDAL Y+D V++ F PEVY FL+IMK F+++L+DT GVIE V LF G+ L+QGFN FLP G + P P E PA+ FVQK++ R+A++PA YQ FL+ L + G+V + +L DL+ +F FLP +RVQK +LARI Sbjct: 61 PEQQGGGDRPLNVSDALSYLDSVKLQFADQPEVYNKFLDIMKDFKSQLIDTPGVIERVSNLFHGHPALIQGFNTFLPAGYRIETGDNADPNTITVTTPAGTTTQATNAAFKYGKQQTVTERVAELVNSEPEAPVVSQESLKPALEFVQKLRTRYANQPAVYQRFLKTLAESGNQGQSDISRMESWSVACLSARYPKGEVMTEIMDLLKDSPDLMRDFVQFLPDERVQKEELARI 294
BLAST of NO17G02220 vs. NCBI_GenBank
Match: EMD34640.1 (hypothetical protein CERSUDRAFT_116814 [Gelatoporia subvermispora B]) HSP 1 Score: 104.4 bits (259), Expect = 2.800e-18 Identity = 75/241 (31.12%), Postives = 107/241 (44.40%), Query Frame = 0 Query: 520 PDPATGKEEGGA-----ISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSMPF------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGS---NPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKG-EXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFL--PQRVQKDLARI 744 P P + G + ++DAL Y+D V++ F P+VY FL+IMK F+++L+DT GVIE V LF G+ L+QGFN FLP G + P P + EA S PA+ FVQKVK R+A++P +Y+ FLE+L + GDV + V LF +L+ EF FL PQ + +LA++ Sbjct: 83 PQPISEVSSGASERPLNVTDALSYLDSVKMQFQDNPDVYNRFLDIMKDFKSQLIDTPGVIERVSNLFHGHPMLIQGFNTFLPAGYRIECTTDTKNPNFITVTTPMGTTTQATNSFAFGTSLAGTAFANIPRSQPLLSEADSSASVNVAPALSFVQKVKTRYANDPDRYKRFLEILYSSTALPSNDVRDMEHWSVAYLSAYYAQGDVVQNVRSLFHDAPELMREFTEFLPDPQTREAELAKL 323
BLAST of NO17G02220 vs. NCBI_GenBank
Match: KZT66663.1 (hypothetical protein DAEQUDRAFT_730074 [Daedalea quercina L-15889]) HSP 1 Score: 104.0 bits (258), Expect = 3.700e-18 Identity = 69/222 (31.08%), Postives = 101/222 (45.50%), Query Frame = 0 Query: 532 ISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGS-------NPAIVFVQKVKERFASEPAKYQTFLEVLQRRE--IVDEKGEXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLPQRVQKDLARIK 745 ++DAL Y+D V++ F PEVY FL+IMK F+++++DT GVIE V LF G+ L+QGFN FLP G + P +E S PA+ ++Q+VK R+A+EP KY+ FLE+L + V E E G+V + + +LF L+ +F FLP R K++ K Sbjct: 71 VTDALTYLDSVKLKFQDNPEVYNRFLDIMKDFKSQIIDTPGVIERVSNLFHGHPTLIQGFNTFLPAGYRIDCTTDAQNPNSITVTTPAGITTQTTHGTFAFGGSSTRPDVPPEIERVPVPSPVPDVNLEPALAYIQRVKTRYANEPEKYRRFLEILNPKTGGGVSELRE-LEHWAVAFLSAGYAQGEVVQRLGKLFSDAPSLMKDFIEFLPDRHMKEVELAK 291
BLAST of NO17G02220 vs. NCBI_GenBank
Match: OBZ89321.1 (Paired amphipathic helix protein pst1 [Choanephora cucurbitarum]) HSP 1 Score: 104.0 bits (258), Expect = 3.700e-18 Identity = 76/239 (31.80%), Postives = 107/239 (44.77%), Query Frame = 0 Query: 522 PATGKEEGGAISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNP-------------AIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKGEXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLP----QRVQKDLARI 744 P+T ++ + DAL Y+D+V+ F +VY FL+IMK F+++++DT GVIE V LF+G+ L+ GFN FLPPG + P+ + + SNP AI +V K+K RFA+ P Y+ FLE+LQ + D+K V V ELF G D+LL+EF FLP QR +K L I Sbjct: 469 PSTLEQRPLNVKDALSYLDKVKAKFATQADVYSRFLDIMKDFKSQIIDTPGVIERVSALFQGHPTLISGFNTFLPPGYRIECSLDAQDQQMITVTTPSGITCIRDNETLILSSPTNATAQPT---SDSQTSNPPKKSSRSPIEFNQAITYVNKIKSRFANRPETYKKFLEILQTYQ-KDQK----------------PIEQVYAEVKELFDGSDELLEEFKQFLPDPNKQRNRKRLGNI 687
BLAST of NO17G02220 vs. NCBI_GenBank
Match: XP_007394231.1 (hypothetical protein PHACADRAFT_172101 [Phanerochaete carnosa HHB-10118-sp] >EKM56381.1 hypothetical protein PHACADRAFT_172101 [Phanerochaete carnosa HHB-10118-sp]) HSP 1 Score: 103.6 bits (257), Expect = 4.800e-18 Identity = 71/216 (32.87%), Postives = 100/216 (46.30%), Query Frame = 0 Query: 532 ISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSM--PFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKGEXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLPQR--VQKDLARI 744 ++DALGY+D V+ +F +VY FL+IMK F+++ +DT GVIE V LFRGY L+QGFN FLP G + P V+A + A+ +VQ+VK R+A++P KY+ FLE+L E+ E DV V LF +DL+ F FLP R Q+ +AR+ Sbjct: 7 VTDALGYLDCVKQTFADQSDVYNRFLDIMKDFKSQFIDTPGVIERVSTLFRGYPTLIQGFNTFLPAGYRIECTTDGDNSDLITVTTPAGTTTQAIREPFPRPSMLGDVVIAAPGAVDA-EQDIERALAYVQRVKNRYANDPQKYKAFLEILSPDELAGE--------------------DVLLRVERLFKADEDLMKGFYQFLPDRNLQQRTVARL 201
BLAST of NO17G02220 vs. NCBI_GenBank
Match: XP_002840086.1 (hypothetical protein [Tuber melanosporum Mel28] >CAZ84277.1 unnamed protein product [Tuber melanosporum]) HSP 1 Score: 103.6 bits (257), Expect = 4.800e-18 Identity = 65/203 (32.02%), Postives = 93/203 (45.81%), Query Frame = 0 Query: 532 ISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPGRSMPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVVEAGGEGSNPAIVFVQKVKERFASEPAKYQTFLEVLQRREIVDEKGEXXXXXXXXXXXXXXXXGDVARTVCELFGGYDDLLDEFCLFLPQ 735 + DAL Y+D+V+ F P+VY FL+IMK F+++ +DT GVI+ V LF G+ L+QGFN FLPPG + + + AG N AI +V K+K RFA +P Y+ FLE+LQ + + + DV V +LF DLL++F FLP+ Sbjct: 210 VKDALSYLDQVKFQFQDQPDVYNKFLDIMKDFKSQTIDTPGVIDRVSTLFSGHPSLIQGFNTFLPPGYRIECSQDPRDTKITVTTPSGIHHAASGGEVSIGGDRSGMQLNTAPLAAGPVEFNHAISYVNKIKNRFAQQPDIYKNFLEILQTYQRESKPIQ-----------------DVYSQVTQLFHSAPDLLEDFKQFLPE 395
BLAST of NO17G02220 vs. NCBI_GenBank
Match: KDQ53793.1 (hypothetical protein JAAARDRAFT_39096 [Jaapia argillacea MUCL 33604]) HSP 1 Score: 103.6 bits (257), Expect = 4.800e-18 Identity = 64/187 (34.22%), Postives = 90/187 (48.13%), Query Frame = 0 Query: 452 FGSQSDTYLEFLAVMKGFEAEQLSIGEVMGRVVGLFQDHEELLEGFKCFLPSEQRRH------------------------------------LAAXXXXXXXXPDPATG---KEEGGA-ISDALGYMDRVRVSFLGTPEVYVAFLNIMKAFQTELLDTRGVIEEVGRLFRGYDDLLQGFNAFLPPG 599 F D + +FL +MKGF++E + V+ RV LF H+ L++GF FLP R + A P P T +E GG + DAL Y+D V++ F P+V FL+IMKAF+++++DT GVIE V LF G+ +L+QGFN FLP G Sbjct: 3 FFDNPDVFNQFLDIMKGFKSEIIDTPGVVERVSTLFHGHQSLIQGFNTFLPVGYRIECGVNAQDASFITVTTPSGTTTQSGNRPLVLPTGNPVVPARSSMPTIDPSPNTSSETREPGGVNVIDALSYLDAVKMQFFDNPDVSNQFLDIMKAFKSQIIDTPGVIERVSTLFHGHPNLIQGFNTFLPVG 189 The following BLAST results are available for this feature:
BLAST of NO17G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02220 ID=NO17G02220|Name=NO17G02220|organism=Nannochloropsis oceanica|type=gene|length=4621bpback to top protein sequence of NO17G02220.1 >NO17G02220.1-protein ID=NO17G02220.1-protein|Name=NO17G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1320bpback to top Synonyms
Publications
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