Naga_100390g3, gene6283 (gene) Nannochloropsis gaditana

Overview
NameNaga_100390g3
Unique Namegene6283
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:662444..667218 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100390g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:662444..667218 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0140110transcription regulator activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G02220NO17G02220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6503rna6503-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6504rna6504-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6503rna6503Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6504rna6504Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6503

>rna6503-protein ID=rna6503-protein|Name=rna6503|organism=Nannochloropsis gaditana|type=polypeptide|length=1197bp
MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPS
YSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASF
LSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLP
SPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQ
TGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDE
LPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEG
GSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVM
RAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPA
PAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGAL
RTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPG
VPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAAD
PARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHF
LPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMA
DAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLG
GDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLL
VKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVM
QVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVR
GGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEG
GAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDD
EEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESR
KKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSG
AVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSS
PPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQ
DKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL
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protein sequence of rna6504

>rna6504-protein ID=rna6504-protein|Name=rna6504|organism=Nannochloropsis gaditana|type=polypeptide|length=1272bp
MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDM
PVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSG
SNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAAL
MQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLF
QGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGW
NARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDR
VKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGF
NCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGA
IEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHP
SLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVR
STFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNA
FLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGD
GGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAE
TEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEG
GGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFL
DVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDED
EDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAM
NVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMA
GKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAG
GEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEG
EEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEG
ELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEE
GGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGG
PGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAV
EVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGG
QEGGQEGGKECLSRADASPSGL
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Synonyms
Publications