rna6504, rna6504 (mRNA) Nannochloropsis gaditana

Overview
Namerna6504
Unique Namerna6504
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length4518
Alignment locationCM002468.1:662444..667218 +

Link to JBrowse

Properties
Property NameValue
Productpaired amphipathic helix protein sin3b
Orig transcript idgnl|cribi|Naga_100390g3.3637.mrna
Orig protein idgnl|cribi|Naga_100390g3.3637
GbkeymRNA
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:662444..667218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100390g3gene6283Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6504rna6504-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24186.1cds6488Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6504 ID=rna6504|Name=rna6504|organism=Nannochloropsis gaditana|type=mRNA|length=4518bp
CTTCTTCTCAAATGTTTTCACCGCGCAATGGTTCATAGGTGTCGCCGGCC
CTATTGCTGTGGACGTGATTACGAGCGTCGGGTGCGTAGAAGGCCCCGGG
TTCATCATAGCCCACACCTGCTTCGGCCCCCCGCGCCTTCACTCTTTCTG
CCTTCCGTCTTCTCCACGCTTGGCGGGCCATTCCCACGGACTTTGGTGCC
ATGGATCGTCAAAATAAAGCAACGGGTGGCAGCGGCCTCTTCAGTGGGAA
TATGAGCAGCGGTCCGGGTGCTAGCGGTACCAACAGCCCAAGGCCCTATC
AACAACAGCAGCAGCCTCCCCCTCCTCTGCACTCGCGCCCGCGGGACATG
CCCGTGGGGGCACCCCCTGTGTATCAACGTGAGTATGAAATGTTTGCATA
TCGAGAATGAAGGGATGCACTAGTACCATAAATCTCGTCGAAGAGCTTTC
GACGCGCAGAGAAAATGCATGGCGGAAGAAAGGGAGGGAGTTGCCACGGC
CTGCTTCGTCCATCTTGAATGCCGATGCAACAAACTTCAAAACATGCGAT
GAGCCTTTTTGATCATTTATTCTGAAACTTGCACCAATTCATCCTTATCC
CACAGGCCCTTCGCTGACAGGCGCGGGCCTTTTCACATCCGCAGGGGGCG
GGATGGCAAGCCTCTTTGCCAACCCAAACTCCTCTCTCCCCGCAGCGTCC
AGCAACTTCCAGGGTTTATACTCTGGGAGCAACGCTCACCTTATGAACAA
CAACGCGAGCAAGCCCGGGCAGGATTGGCACCGTGGTCTCCCCCCTCCTT
CCTACTCTCTCCCCTATAATGCTCCGAGCCCCGCTTTCCCCGGTCGTCCC
TCCATGCCCCCGTCCCACGCAGCATTGATGCAGAACGCCCTGGCCTATCT
GGAGCTCGTGCAACGCACCTTTGCGCACCAGCCCGACATATACGCCTCCT
TTCTGAGCGTGATGAGGGAGCACAAGGAAGGGCGCCGGGATACCCCCAAC
CTCTGTGTGCAGGTCTCGCGCTTGTTCCAAGGGCAGGATTCCCTCCTCCG
AGGCTTTCAAGACTTTTTGAGCGGGATCCACGCCGTCGATCCGCCCCTTC
CTTCCCCAGCCCCATCGGTCCCGGGGCCGGCGTCCTTCCCGCACTCCATG
GGCCATCCCTCAGGGTATCGGGGATGGAACGCACGCCCCTCCGCCCCGCC
CTCCCACCCTCCCTTCCTGCCCGGAGGAAACGGGACCCGGCCCCCCCTGC
AGACCGGTGTGACGGAAGGGGGAGGGGAGGCGAAGGAGGACGTGAGCATG
GAGGACGCGGTCCTGTACATGGACCGGGTCAAGTCCGCCTACGCCGACAA
GCCCGAGACCTACGCCCGCTTTCTGGAGATCATCAAGAGCTTTCAAGACG
AGCTCCCCGACACGGCCCGGGTACTGGAGGCCGTGACGCAGATCTTTCAG
GGACGGGATGATTTGATCCAAGGCTTCAATTGCTTTCTCCCGGCGGCGCA
CCGTCTTCCTCCCCCCAAGGGCCTCCCAGGCGCCCGGGGGGGGGGAGAGG
GGGGCAGTTTACAGGGCGGGGAAGAGGGCGGAGGGGAGGGAGAGGGGGAG
GCCGGGCAGGCACAGATGCAGGGGGCGATCGAGTTCACGGACCAGGTGCG
TGCGACCTTCCAGAACCAACCCGGCGTCTATTTGGAGTTTTTGCGGGTGA
TGCGGGCCTTCCAGGGGGGGGAGATGGGCATCGGGGAGGTGATGAAGCGG
GTGGGGAGGATGTTCCAAGACCACCCCTCCCTCCTGGACGGCTTCAACCG
CTTCCTCCCCCCGCAATACCGGATGCCCGCGCCGCAGGGCAAGGCGCCCG
CCCCGGCCGGGGGCTGGGAGGGCGGGGAGGAGGACGTGGGGGAGGCGGAC
GCCCTCGACTTTATGGATAGGGTTCGCTCCACCTTTACCGCCCGGCCCGA
GGTGTACGTGGCGTTTCTAGAGGTCATGCGGGGCTTTCAGGCGGGGGCGC
TCCGCACGGAGGGCGTGATGCAAGAGGTGGGGAGGTTGTTTGCAGGCGAG
GAGGCCCTGCTGCGGGGCTTCAACGCCTTCCTCCCTCATGGCTACCGGAT
GCCCTCCGTCCCGCCCTCCGCCCCGCCCTTTCAACGGCCCTCCCCGCCTG
GCGTGCCGGGAAGGGCCGGGTCGGGAGGAGGGGAAGGGAGCGGAGGAGGG
GGAGGGGAAGGGGGAGGAGGAGGAGATGGAGGGGAGGGGGAGCGGGACGT
GGAGTTTGCGGCGAATTTCATCGAGAACGTTCGAAACCGTTTCGCGGCAG
ATCCCGCCCGGTACCAGACCTTCCTGGAGGTGCTGCAGCGCCATGAGGAG
GAAGGGAAGGAGGGCGGGCTGGCGGAGACGGAGCAGCTGGCCAAGACGGT
CTCGGAGCTCTTCCGGGGCCACGAGGATCTCTTGAAAGACTTCGCGCATT
TTTTGCCGGGCCCAGTTCGGGCAGCGTTGGGGCTGATGGGGCCGGAGGAG
GACGGGAAGCTTCCGGAAGGGGAGGGGGGGGGCGGCGAGGGGGAGGGCAA
GAAGCCGGCGGAGGAGAAGGAAGAGGGCGGGGAGGAGGAGATGGGGATGG
CCGACGCCTTCAAATTCCTCCAGCGGGTGCGTGAGAAGATAGGGGCGGAG
AATGAGGAGAAGTACAACGAGTTCTTGGACGTGCTCCGGGGCTACGAGGA
GAAGGAGATCGTCCCGGCGGAGGCGACGCGGCGGGTAGAGGCGTTACTGG
GCGGGGACACGGAGCTGTGGGAGGAATTCAAGGGATTTCTCCCGGACGTG
GGGAGGCGCGAGGAGGAGGACGAGGACGAGGACGAGGAGGATGACGAGGG
GCAAGAGGAGGAGGAGGAGGAGGAGGGGAGGGAGGAGGTGGAGTCGTTGC
TGGTGAAGGTGCGTGTTTTCTTCGCAAAACGTCCCACGGAAGGGACGCGG
CTGGTGGAAGCGTTGGAGGGGGCGATGAATGTGGAAGGGGGCCAGGGAGG
TTCAGGGTCGGACCGGAAGAAGAAATGGGAGGAGACGAAAGAGAGGGTCA
TGCAAGTGGCCAGGGAGGTGCTGAAGGAGGAGGGGGAGGAAAGTGGGATG
CGAAAGGAGTTGGAGGAATGGATGGCGGGGAAGGAGGGGGAGAAAACGAA
GGAGGTCGGGTCGGGGGACCAAGCGGGTGGTGTGGTGGAGGGAGCGGTTC
GAGGCGGAGGAGGGGAAAGAGCAGAGGCCAGGGGGAAGGAAGGGGGAATG
GACGTTGAAAAAGGAGGGCAGGCGGGAGGGGAAGGTGGGAGGGGGACAGG
AGGGGGAAGAAGAGACGGGAAGGAGGAAGAGGAGGTTGGGAGGGGCGAGG
GAGGAGCAGGGAAAGGGACAGAGAAAGAAAATTCCCCGAGGGGGAAGAAG
CGGAAAGCAGGAGAGGGCGACGAGGGGGAGGAGGAGGTAGAGGAGGAAGA
GGAAGGGGAGGAAGAGGAGCTTGTGATCATGGACGAGGACATGACGGACG
ACGAGGAAGGGAAAGAGGAGGGGGGAGAGAAGAACGCCGGGAAGGGAGCG
GAGAAGGAGGAGGAGGGAAAAGAGGGAGAGCTAGGGGGAGGGAAGGGCGC
GGAGGAGGATGGGGGAGAAGGCGACCCGGGAATAGGGCCCAAAGAAAGTC
GCAAGAAAGAGGCTTCGGGAGGCGAGGCATCAGGGGACAAGGTCGATCCG
AAGGGGAAAGGGAAAAGGGAGGAAGAAGGAGGGCGGGAAGGAGGGCGGGA
CGGAGGGCGGGAAGGAGGGGCAGAGGAAACGGGGGAGGAGGAGACTTCCG
GGGCGGTGGGGACAGGGGAAGTACCCGCTCTGGGAAAGGAAGGAGGGAGG
GAAGAAGGAGGTGAAGAGGGCGGCGGGCCCGGTGGGGGCCATGAAGGAAA
TAGTCCCGGAGCAGTGAAGCCTAGCCCGCCCACGTCCACTCCACGCTCTT
CTCCTCCCTCGGTCAGTCCCTCCTCGGGCCCTCGGAAACGGAGTTTGGCG
GAGGTGATGGGGAAGGAAGGGGCGGTGGAGGTGATGGGAAAGGAAGAGGC
GGGGCCAGTGGACGGGGAGGGCCGAAGCAGCAACCACACGGGCCTCGGAC
AGGACAAGGCCTCGAGCCCCGTGCAAGGCAACCTCCTGAAGGGAGGAGGG
AGCGACGAGGGCGGGAAGGAGGGCGGGCAGGAGGGCGGGCAGGAGGGCGG
GAAGGAATGCCTGTCTAGGGCGGACGCAAGTCCATCGGGATTGTAGGAGG
GAGAGATGCTAAGGCGCCGGGTGGAAGGCTCGCTCGGTGGGATGGAGGCG
CGGGAAGGGGAGGGATGGAATTCTGCGGGCGAGATCCGGACCTTAAAGGG
GGGAACCAGGGCGTGGGTGGGCCAGAGAGCCGCGTGGGGATGGGTGGACT
TTCCCAAGGTTGCTGGTGGGGAGAAAGCGACCCGGAGGCTCGCCGTGCGC
GCGTGGCGTTGATGCATGGGGCATGGGGAAGAAAGCAAGAGGGAAAAGAC
ACGATCGACAGCCGAACG
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protein sequence of rna6504

>rna6504-protein ID=rna6504-protein|Name=rna6504|organism=Nannochloropsis gaditana|type=polypeptide|length=1272bp
MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDM
PVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSG
SNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAAL
MQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLF
QGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGW
NARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDR
VKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGF
NCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGA
IEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHP
SLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVR
STFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNA
FLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGD
GGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAE
TEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEG
GGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFL
DVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDED
EDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAM
NVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMA
GKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAG
GEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEG
EEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEG
ELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEE
GGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGG
PGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAV
EVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGG
QEGGQEGGKECLSRADASPSGL
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mRNA from alignment at CM002468.1:662444..667218+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6504 ID=rna6504|Name=rna6504|organism=Nannochloropsis gaditana|type=mRNA|length=4775bp|location=Sequence derived from alignment at CM002468.1:662444..667218+ (Nannochloropsis gaditana)
CTTCTTCTCAAATGTTTTCACCGCGCAATGGTTCATAGGTGTCGCCGGCC CTATTGCTGTGGACGTGATTACGAGCGTCGGGTGCGTAGAAGGCCCCGGG TTCATCATAGCCCACACCTGCTTCGGCCCCCCGCGCCTTCACTCTTTCTG CCTTCCGTCTTCTCCACGCTTGGCGGGCCATTCCCACGGACTTTGGTGCC ATGGATCGTCAAAATAAAGCAACGGGTGGCAGCGGCCTCTTCAGTGGGAA TATGAGCAGCGGTCCGGGTGCTAGCGGTACCAACAGCCCAAGGCCCTatc aacaacagcagcagcctccccctcctctgcactCGCGCCCGCGGGACATG CCCGTGGGGGCACCCCCTGTGTATCAACGTGAGTATGAAATGTTTGCATA TCGAGAATGAAGGGATGCACTAGTACCATAAATCTCGTCGAAGAGCTTTC GACGCGCAGAGAAAATGcatggcggaagaaagggagggagttgcCACGGC CTGCTTCGTCCATCTTGAATGCCGATGCAACAAACTTCAAAACATGCGAT GAGCCTTTTTGATCATTTATTCTGAAACTTGCACCAATTCATCCTTATCC CACAGGCCCTTCGCTGACAGGCGCGGGCCTTTTCACATCCGCAGGGGGCG GGATGGCAAGCCTCTTTGCCAACCCAaactcctctctccccgcagCGTCC AGCAACTTCCAGGGTTTATACTCTGGGAGCAACGCTCACCTTATGAACAA CAACGCGAGCAAGCCCGGGCAGGATTGGCACCGtggtctcccccctcctt cctactcTCTCCCCTATAATGCTCCGagccccgctttccccggtcgtccc tccatgcccccgtCCCACGCAGCATTGATGCAGAACGCCCTGGCCTATCT GGAGCTCGTGCAACGCACCTTTGCGCACCAGCCCGACATATACGCCTCCT TTCTGAGCGTGATGAGGGAGCACAAGGAAGGGCGCCGGGATACCCCCAAC CTCTGTGTGCAGGTCTCGCGCTTGTTCCAAGGGCAggattccctcctccg aggcTTTCAAGACTTTTTGAGCGGGATCCACGCCGTCgatccgccccttc cttccccagcccCATCGGTCCCGGGGCCGGCGTCCTTCCCGCACTCCATG GGCCATCCCTCAGGGTATCGGGGATGGAACgcacgcccctccgccccgcc ctcccaccctcccttcctgcccggAGGAAACGGGACCCGGCCCCCCCTGC AGACCGGTGtgacggaagggggaggggaggcgaaggaggacgtgagcatg gaggacgcggtcctGTACATGGACCGGGTCAAGTCCGCCTACGCCGACAA GCCCGAGGtaggcccctccctccctcccgccctcctctcctgcctccctc cctcccttccgccctcctcccctgcctccctccctcccttccgccctcct ctcctgtctccctctGTGCTCCCCCCCGTGCTCCCTCTTTGTTTGTCCTC CCAGCCCGACATCTGCCCAGAGTGCGTTCCCTATTgatgccttcctctct ctctccctccctccctccctccctccctccctccctccctccctccctcc ctccctccctccagacctACGCCCGCTTTCTGGAGATCATCAAGAGCTTT CAAGACGAGCTCCCCGACACGGCCCGGGTACTGGAGGCCGTGACGCAGAT CTTTCAGGGACGGGATGATTTGATCCAAGGCTTCAATTGCTTTCTCCCGG CGGCgcaccgtcttcctccccccaaggGCCTCCCAggcgcccgggggggg ggagaggggggcagTTtacagggcggggaagagggcggaggggagggaga gggggaggccgggcagGCACAGATGCAGGGGGCGATCGAGTTCACGGACC AGGTGCGTGCGACCTTCCAGAACCAACCCGGCGTCTATTTGGAGTTTTTG CGGGTGATGCGGGCCTtccaggggggggagatgggcatcggggaggtgat gaagcgggtggggaggatgtTCCAagaccacccctccctcctggacggCT TCaaccgcttcctccccccgcaatACCGGATGCCCGCGCCGCAGGGCAAG GCGCCCGCCCCGGccgggggctgggagggcggggaggaggacgtggggga ggcggacgccCTCGACTTTATGGATAGGGTTCGCTCCACCTTTACCGCCC GGCCCGAGGTGTACGTGGCGTTTCTAGAGGTCATGCGGGGCTTTCAGGCG GGGGCGCTCCGCACGGAGGGCGTGATGcaagaggtggggaggttgtttgc aggcgaggaggcccTGCTGCGGGGCTTcaacgccttcctccctcatggcT ACCGGatgccctccgtcccgccctccgccccgccctttcaacggccctcc ccgcctggcGTGCCGGGAAGGGCCgggtcgggaggaggggaagggagcgg aggagggggaggggaagggggaggaggaggagatggaggggagggggagc gggacGTGGAGTTTGCGGCGAATTTCATCGAGAACGTTCGAAACCGTTTC GCGGCAGATCCCGCCCGGTACCAGACCTTCCTGGAGGTGCTGCAGCgcca tgaggaggaagggaaggagggcgggctggcggagacggagcaGCTGGCCA AGACGGTCTCGGAGCTCTTCCGGGGCCACGAGGATCTCTTGAAAGacttc gcgcattttttgcCGGGCCCAGTTCGGGCAGCGTTGGGGCTGatggggcc ggaggaggacgggaagcttccggaaggggagggggggggcggcgaggggg agggcaagaagccggcggaggagaaggaagagggcggggaggaggagatg gggatgGCCGACGCCTTCAAATTCCTCCAGCGGGTGCGTGAGAAGATAGG GGCGGAGAATGAGGAGAAGTACAACGAGTTCTTGGACGTGCTCCGGGGct acgaggagaaggagatcgTCCCGGCGGAGGCGACGCGGCGGGTAGAGGCG TTACTGGGCGGGGACACGGAGCTGTGGGAGGAATTCAAGGGATTTCTCCC GGACGTGGggaggcgcgaggaggaggacgaggacgaggacgaggaggatg acgaggggcaagaggaggaggaggaggaggaggggagggaggaggtggag tcGTTGCTGGTGAAGGTGCGTGTTTTCTTCGCAAAACGTCCCACGGAAGG GACGCGGCTGGTGGAAGCGTTGGAGGGGGCGATGAATGtggaagggggcc agggaggttCAGGGTCGGAccggaagaagaaatgggagGAGACGAAAGAG AGGGTCATGCAAGTGGCCAGGGAggtgctgaaggaggagggggaggaaag tgggaTGCgaaaggagttggaggaatggatggcggggaaggagggggaga aaacgAAGGAGGTCGGGTCGGGGGACCAAGCGGGTggtgtggtggaggga gcggttcgaggcggaggaggggaaagagcagaggccagggggaaggaagg gggaatggacgttgaaaaaggagggcaggcgggaggggaaggtgggaggg ggacaggagggggaagaagagacgggaaggaggaagaggaggttgggagg ggcgagggaggagcagggaaagggacagagaaagaaaattccccgagggg gaagaagcggaaagcaggagagggcgacgagggggaggaggaggtagagg aggaagaggaaggggaggaagaggagcttgtgatcatggacgaggacatg acggacgacgaggaagggaaagaggaggggggagagaagaacgccgggaa gggagcggagaaggaggaggagggaaaagagggagagctagggggaggga agggcgcggaggaggatgggggagaaggcgaccCGGGAATAGGGCCCAAA GAAAGTCGCAAGAAAGAGGCTTCGGGAGGCGAGGCATCAGGGGACAAGGT CGATccgaaggggaaagggaaaagggaggaagaaggagggcgggaaggag ggcgggacggagggcgggaaggaggggcagaggaaacgggggaggaggag acttccggggcggtggggacAGGGGAAGTACCCGCtctgggaaaggaagg agggagggaagaaggaggtgaagagggCGGCGGGCCCGGTGGGGGCCATG AAGGAAATAGTCCCGGAGCAGTGAAGCCTAGCCCGCCCACGTCCACTCCa cgctcttctcctccctcggtcaGTCCCTCCTCGGGCCCTCGGAAACGGAG TTTGGCGgaggtgatggggaaggaaggggcggtggaggtgatgggaaagg aagaggcggggccagtggacggggagggccgaAGCAGCAACCACACGGGC CTCGGACAGGACAAGGCCTCGAGCCCCGTGCAAGGCAACCTcctgaaggg aggagggagcgacgagggcgggaaggagggcgggcaggagggcgggcagg agggcgggaaggaatgcCTGTCTAGGGCGGACGCAAGTCCATCGGGATtg taggagggagagatgctAAGGCGCCGGGTGGAAGGCTCGCTCggtgggat ggaggcgcgggaaggggagggatggaattCTGCGGGCGAGATCCGGACCT TAAAGGGGGGAACCAGGGCGTGGGTGGGCCAGAGAGCCGCGTGGGGATGG GTGGACTTTCCCAAGGTTGCTggtggggagaaagcgacccggaggctCGC CGTGCGCGCGTGGCGTTGATGCATGGGGCatggggaagaaagcaagaggg aaaagacacGATCGACAGCCGAACG
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Coding sequence (CDS) from alignment at CM002468.1:662444..667218+

>rna6504 ID=rna6504|Name=rna6504|organism=Nannochloropsis gaditana|type=CDS|length=11457bp|location=Sequence derived from alignment at CM002468.1:662444..667218+ (Nannochloropsis gaditana)
ATGGATCGTCAAAATAAAGCAACGGGTGGCAGCGGCCTCTTCAGTGGGAA
TATGAGCAGCGGTCCGGGTGCTAGCGGTACCAACAGCCCAAGGCCCTatc
aacaacagcagcagcctccccctcctctgcactCGCGCCCGCGGGACATG
CCCGTGGGGGCACCCCCTGTGTATCAACGCCCTTCGCTGACAGGCGCGGG
CCTTTTCACATCCGCAGGGGGCGGGATGGCAAGCCTCTTTGCCAACCCAa
actcctctctccccgcagCGTCCAGCAACTTCCAGGGTTTATACTCTGGG
AGCAACGCTCACCTTATGAACAACAACGCGAGCAAGCCCGGGCAGGATTG
GCACCGtggtctcccccctccttcctactcTCTCCCCTATAATGCTCCGa
gccccgctttccccggtcgtccctccatgcccccgtCCCACGCAGCATTG
ATGCAGAACGCCCTGGCCTATCTGGAGCTCGTGCAACGCACCTTTGCGCA
CCAGCCCGACATATACGCCTCCTTTCTGAGCGTGATGAGGGAGCACAAGG
AAGGGCGCCGGGATACCCCCAACCTCTGTGTGCAGGTCTCGCGCTTGTTC
CAAGGGCAggattccctcctccgaggcTTTCAAGACTTTTTGAGCGGGAT
CCACGCCGTCgatccgccccttccttccccagcccCATCGGTCCCGGGGC
CGGCGTCCTTCCCGCACTCCATGGGCCATCCCTCAGGGTATCGGGGATGG
AACgcacgcccctccgccccgccctcccaccctcccttcctgcccggAGG
AAACGGGACCCGGCCCCCCCTGCAGACCGGTGtgacggaagggggagggg
aggcgaaggaggacgtgagcatggaggacgcggtcctGTACATGGACCGG
GTCAAGTCCGCCTACGCCGACAAGCCCGAGacctACGCCCGCTTTCTGGA
GATCATCAAGAGCTTTCAAGACGAGCTCCCCGACACGGCCCGGGTACTGG
AGGCCGTGACGCAGATCTTTCAGGGACGGGATGATTTGATCCAAGGCTTC
AATTGCTTTCTCCCGGCGGCgcaccgtcttcctccccccaaggGCCTCCC
AggcgcccggggggggggagaggggggcagTTtacagggcggggaagagg
gcggaggggagggagagggggaggccgggcagGCACAGATGCAGGGGGCG
ATCGAGTTCACGGACCAGGTGCGTGCGACCTTCCAGAACCAACCCGGCGT
CTATTTGGAGTTTTTGCGGGTGATGCGGGCCTtccaggggggggagatgg
gcatcggggaggtgatgaagcgggtggggaggatgtTCCAagaccacccc
tccctcctggacggCTTCaaccgcttcctccccccgcaatACCGGATGCC
CGCGCCGCAGGGCAAGGCGCCCGCCCCGGccgggggctgggagggcgggg
aggaggacgtgggggaggcggacgccCTCGACTTTATGGATAGGGTTCGC
TCCACCTTTACCGCCCGGCCCGAGGTGTACGTGGCGTTTCTAGAGGTCAT
GCGGGGCTTTCAGGCGGGGGCGCTCCGCACGGAGGGCGTGATGcaagagg
tggggaggttgtttgcaggcgaggaggcccTGCTGCGGGGCTTcaacgcc
ttcctccctcatggcTACCGGatgccctccgtcccgccctccgccccgcc
ctttcaacggccctccccgcctggcGTGCCGGGAAGGGCCgggtcgggag
gaggggaagggagcggaggagggggaggggaagggggaggaggaggagat
ggaggggagggggagcgggacGTGGAGTTTGCGGCGAATTTCATCGAGAA
CGTTCGAAACCGTTTCGCGGCAGATCCCGCCCGGTACCAGACCTTCCTGG
AGGTGCTGCAGCgccatgaggaggaagggaaggagggcgggctggcggag
acggagcaGCTGGCCAAGACGGTCTCGGAGCTCTTCCGGGGCCACGAGGA
TCTCTTGAAAGacttcgcgcattttttgcCGGGCCCAGTTCGGGCAGCGT
TGGGGCTGatggggccggaggaggacgggaagcttccggaaggggagggg
gggggcggcgagggggagggcaagaagccggcggaggagaaggaagaggg
cggggaggaggagatggggatgGCCGACGCCTTCAAATTCCTCCAGCGGG
TGCGTGAGAAGATAGGGGCGGAGAATGAGGAGAAGTACAACGAGTTCTTG
GACGTGCTCCGGGGctacgaggagaaggagatcgTCCCGGCGGAGGCGAC
GCGGCGGGTAGAGGCGTTACTGGGCGGGGACACGGAGCTGTGGGAGGAAT
TCAAGGGATTTCTCCCGGACGTGGggaggcgcgaggaggaggacgaggac
gaggacgaggaggatgacgaggggcaagaggaggaggaggaggaggaggg
gagggaggaggtggagtcGTTGCTGGTGAAGGTGCGTGTTTTCTTCGCAA
AACGTCCCACGGAAGGGACGCGGCTGGTGGAAGCGTTGGAGGGGGCGATG
AATGtggaagggggccagggaggttCAGGGTCGGAccggaagaagaaatg
ggagGAGACGAAAGAGAGGGTCATGCAAGTGGCCAGGGAggtgctgaagg
aggagggggaggaaagtgggaTGCgaaaggagttggaggaatggatggcg
gggaaggagggggagaaaacgAAGGAGGTCGGGTCGGGGGACCAAGCGGG
Tggtgtggtggagggagcggttcgaggcggaggaggggaaagagcagagg
ccagggggaaggaagggggaatggacgttgaaaaaggagggcaggcggga
ggggaaggtgggagggggacaggagggggaagaagagacgggaaggagga
agaggaggttgggaggggcgagggaggagcagggaaagggacagagaaag
aaaattccccgagggggaagaagcggaaagcaggagagggcgacgagggg
gaggaggaggtagaggaggaagaggaaggggaggaagaggagcttgtgat
catggacgaggacatgacggacgacgaggaagggaaagaggaggggggag
agaagaacgccgggaagggagcggagaaggaggaggagggaaaagaggga
gagctagggggagggaagggcgcggaggaggatgggggagaaggcgaccC
GGGAATAGGGCCCAAAGAAAGTCGCAAGAAAGAGGCTTCGGGAGGCGAGG
CATCAGGGGACAAGGTCGATccgaaggggaaagggaaaagggaggaagaa
ggagggcgggaaggagggcgggacggagggcgggaaggaggggcagagga
aacgggggaggaggagacttccggggcggtggggacAGGGGAAGTACCCG
CtctgggaaaggaaggagggagggaagaaggaggtgaagagggCGGCGGG
CCCGGTGGGGGCCATGAAGGAAATAGTCCCGGAGCAGTGAAGCCTAGCCC
GCCCACGTCCACTCCacgctcttctcctccctcggtcaGTCCCTCCTCGG
GCCCTCGGAAACGGAGTTTGGCGgaggtgatggggaaggaaggggcggtg
gaggtgatgggaaaggaagaggcggggccagtggacggggagggccgaAG
CAGCAACCACACGGGCCTCGGACAGGACAAGGCCTCGAGCCCCGTGCAAG
GCAACCTcctgaagggaggagggagcgacgagggcgggaaggagggcggg
caggagggcgggcaggagggcgggaaggaatgcCTGTCTAGGGCGGACGC
AAGTCCATCGGGATtgtagATGGATCGTCAAAATAAAGCAACGGGTGGCA
GCGGCCTCTTCAGTGGGAATATGAGCAGCGGTCCGGGTGCTAGCGGTACC
AACAGCCCAAGGCCCTatcaacaacagcagcagcctccccctcctctgca
ctCGCGCCCGCGGGACATGCCCGTGGGGGCACCCCCTGTGTATCAACGCC
CTTCGCTGACAGGCGCGGGCCTTTTCACATCCGCAGGGGGCGGGATGGCA
AGCCTCTTTGCCAACCCAaactcctctctccccgcagCGTCCAGCAACTT
CCAGGGTTTATACTCTGGGAGCAACGCTCACCTTATGAACAACAACGCGA
GCAAGCCCGGGCAGGATTGGCACCGtggtctcccccctccttcctactcT
CTCCCCTATAATGCTCCGagccccgctttccccggtcgtccctccatgcc
cccgtCCCACGCAGCATTGATGCAGAACGCCCTGGCCTATCTGGAGCTCG
TGCAACGCACCTTTGCGCACCAGCCCGACATATACGCCTCCTTTCTGAGC
GTGATGAGGGAGCACAAGGAAGGGCGCCGGGATACCCCCAACCTCTGTGT
GCAGGTCTCGCGCTTGTTCCAAGGGCAggattccctcctccgaggcTTTC
AAGACTTTTTGAGCGGGATCCACGCCGTCgatccgccccttccttcccca
gcccCATCGGTCCCGGGGCCGGCGTCCTTCCCGCACTCCATGGGCCATCC
CTCAGGGTATCGGGGATGGAACgcacgcccctccgccccgccctcccacc
ctcccttcctgcccggAGGAAACGGGACCCGGCCCCCCCTGCAGACCGGT
Gtgacggaagggggaggggaggcgaaggaggacgtgagcatggaggacgc
ggtcctGTACATGGACCGGGTCAAGTCCGCCTACGCCGACAAGCCCGAGa
cctACGCCCGCTTTCTGGAGATCATCAAGAGCTTTCAAGACGAGCTCCCC
GACACGGCCCGGGTACTGGAGGCCGTGACGCAGATCTTTCAGGGACGGGA
TGATTTGATCCAAGGCTTCAATTGCTTTCTCCCGGCGGCgcaccgtcttc
ctccccccaaggGCCTCCCAggcgcccggggggggggagaggggggcagT
Ttacagggcggggaagagggcggaggggagggagagggggaggccgggca
gGCACAGATGCAGGGGGCGATCGAGTTCACGGACCAGGTGCGTGCGACCT
TCCAGAACCAACCCGGCGTCTATTTGGAGTTTTTGCGGGTGATGCGGGCC
Ttccaggggggggagatgggcatcggggaggtgatgaagcgggtggggag
gatgtTCCAagaccacccctccctcctggacggCTTCaaccgcttcctcc
ccccgcaatACCGGATGCCCGCGCCGCAGGGCAAGGCGCCCGCCCCGGcc
gggggctgggagggcggggaggaggacgtgggggaggcggacgccCTCGA
CTTTATGGATAGGGTTCGCTCCACCTTTACCGCCCGGCCCGAGGTGTACG
TGGCGTTTCTAGAGGTCATGCGGGGCTTTCAGGCGGGGGCGCTCCGCACG
GAGGGCGTGATGcaagaggtggggaggttgtttgcaggcgaggaggcccT
GCTGCGGGGCTTcaacgccttcctccctcatggcTACCGGatgccctccg
tcccgccctccgccccgccctttcaacggccctccccgcctggcGTGCCG
GGAAGGGCCgggtcgggaggaggggaagggagcggaggagggggagggga
agggggaggaggaggagatggaggggagggggagcgggacGTGGAGTTTG
CGGCGAATTTCATCGAGAACGTTCGAAACCGTTTCGCGGCAGATCCCGCC
CGGTACCAGACCTTCCTGGAGGTGCTGCAGCgccatgaggaggaagggaa
ggagggcgggctggcggagacggagcaGCTGGCCAAGACGGTCTCGGAGC
TCTTCCGGGGCCACGAGGATCTCTTGAAAGacttcgcgcattttttgcCG
GGCCCAGTTCGGGCAGCGTTGGGGCTGatggggccggaggaggacgggaa
gcttccggaaggggagggggggggcggcgagggggagggcaagaagccgg
cggaggagaaggaagagggcggggaggaggagatggggatgGCCGACGCC
TTCAAATTCCTCCAGCGGGTGCGTGAGAAGATAGGGGCGGAGAATGAGGA
GAAGTACAACGAGTTCTTGGACGTGCTCCGGGGctacgaggagaaggaga
tcgTCCCGGCGGAGGCGACGCGGCGGGTAGAGGCGTTACTGGGCGGGGAC
ACGGAGCTGTGGGAGGAATTCAAGGGATTTCTCCCGGACGTGGggaggcg
cgaggaggaggacgaggacgaggacgaggaggatgacgaggggcaagagg
aggaggaggaggaggaggggagggaggaggtggagtcGTTGCTGGTGAAG
GTGCGTGTTTTCTTCGCAAAACGTCCCACGGAAGGGACGCGGCTGGTGGA
AGCGTTGGAGGGGGCGATGAATGtggaagggggccagggaggttCAGGGT
CGGAccggaagaagaaatgggagGAGACGAAAGAGAGGGTCATGCAAGTG
GCCAGGGAggtgctgaaggaggagggggaggaaagtgggaTGCgaaagga
gttggaggaatggatggcggggaaggagggggagaaaacgAAGGAGGTCG
GGTCGGGGGACCAAGCGGGTggtgtggtggagggagcggttcgaggcgga
ggaggggaaagagcagaggccagggggaaggaagggggaatggacgttga
aaaaggagggcaggcgggaggggaaggtgggagggggacaggagggggaa
gaagagacgggaaggaggaagaggaggttgggaggggcgagggaggagca
gggaaagggacagagaaagaaaattccccgagggggaagaagcggaaagc
aggagagggcgacgagggggaggaggaggtagaggaggaagaggaagggg
aggaagaggagcttgtgatcatggacgaggacatgacggacgacgaggaa
gggaaagaggaggggggagagaagaacgccgggaagggagcggagaagga
ggaggagggaaaagagggagagctagggggagggaagggcgcggaggagg
atgggggagaaggcgaccCGGGAATAGGGCCCAAAGAAAGTCGCAAGAAA
GAGGCTTCGGGAGGCGAGGCATCAGGGGACAAGGTCGATccgaaggggaa
agggaaaagggaggaagaaggagggcgggaaggagggcgggacggagggc
gggaaggaggggcagaggaaacgggggaggaggagacttccggggcggtg
gggacAGGGGAAGTACCCGCtctgggaaaggaaggagggagggaagaagg
aggtgaagagggCGGCGGGCCCGGTGGGGGCCATGAAGGAAATAGTCCCG
GAGCAGTGAAGCCTAGCCCGCCCACGTCCACTCCacgctcttctcctccc
tcggtcaGTCCCTCCTCGGGCCCTCGGAAACGGAGTTTGGCGgaggtgat
ggggaaggaaggggcggtggaggtgatgggaaaggaagaggcggggccag
tggacggggagggccgaAGCAGCAACCACACGGGCCTCGGACAGGACAAG
GCCTCGAGCCCCGTGCAAGGCAACCTcctgaagggaggagggagcgacga
gggcgggaaggagggcgggcaggagggcgggcaggagggcgggaaggaat
gcCTGTCTAGGGCGGACGCAAGTCCATCGGGATtgtagATGGATCGTCAA
AATAAAGCAACGGGTGGCAGCGGCCTCTTCAGTGGGAATATGAGCAGCGG
TCCGGGTGCTAGCGGTACCAACAGCCCAAGGCCCTatcaacaacagcagc
agcctccccctcctctgcactCGCGCCCGCGGGACATGCCCGTGGGGGCA
CCCCCTGTGTATCAACGCCCTTCGCTGACAGGCGCGGGCCTTTTCACATC
CGCAGGGGGCGGGATGGCAAGCCTCTTTGCCAACCCAaactcctctctcc
ccgcagCGTCCAGCAACTTCCAGGGTTTATACTCTGGGAGCAACGCTCAC
CTTATGAACAACAACGCGAGCAAGCCCGGGCAGGATTGGCACCGtggtct
cccccctccttcctactcTCTCCCCTATAATGCTCCGagccccgctttcc
ccggtcgtccctccatgcccccgtCCCACGCAGCATTGATGCAGAACGCC
CTGGCCTATCTGGAGCTCGTGCAACGCACCTTTGCGCACCAGCCCGACAT
ATACGCCTCCTTTCTGAGCGTGATGAGGGAGCACAAGGAAGGGCGCCGGG
ATACCCCCAACCTCTGTGTGCAGGTCTCGCGCTTGTTCCAAGGGCAggat
tccctcctccgaggcTTTCAAGACTTTTTGAGCGGGATCCACGCCGTCga
tccgccccttccttccccagcccCATCGGTCCCGGGGCCGGCGTCCTTCC
CGCACTCCATGGGCCATCCCTCAGGGTATCGGGGATGGAACgcacgcccc
tccgccccgccctcccaccctcccttcctgcccggAGGAAACGGGACCCG
GCCCCCCCTGCAGACCGGTGtgacggaagggggaggggaggcgaaggagg
acgtgagcatggaggacgcggtcctGTACATGGACCGGGTCAAGTCCGCC
TACGCCGACAAGCCCGAGacctACGCCCGCTTTCTGGAGATCATCAAGAG
CTTTCAAGACGAGCTCCCCGACACGGCCCGGGTACTGGAGGCCGTGACGC
AGATCTTTCAGGGACGGGATGATTTGATCCAAGGCTTCAATTGCTTTCTC
CCGGCGGCgcaccgtcttcctccccccaaggGCCTCCCAggcgcccgggg
ggggggagaggggggcagTTtacagggcggggaagagggcggaggggagg
gagagggggaggccgggcagGCACAGATGCAGGGGGCGATCGAGTTCACG
GACCAGGTGCGTGCGACCTTCCAGAACCAACCCGGCGTCTATTTGGAGTT
TTTGCGGGTGATGCGGGCCTtccaggggggggagatgggcatcggggagg
tgatgaagcgggtggggaggatgtTCCAagaccacccctccctcctggac
ggCTTCaaccgcttcctccccccgcaatACCGGATGCCCGCGCCGCAGGG
CAAGGCGCCCGCCCCGGccgggggctgggagggcggggaggaggacgtgg
gggaggcggacgccCTCGACTTTATGGATAGGGTTCGCTCCACCTTTACC
GCCCGGCCCGAGGTGTACGTGGCGTTTCTAGAGGTCATGCGGGGCTTTCA
GGCGGGGGCGCTCCGCACGGAGGGCGTGATGcaagaggtggggaggttgt
ttgcaggcgaggaggcccTGCTGCGGGGCTTcaacgccttcctccctcat
ggcTACCGGatgccctccgtcccgccctccgccccgccctttcaacggcc
ctccccgcctggcGTGCCGGGAAGGGCCgggtcgggaggaggggaaggga
gcggaggagggggaggggaagggggaggaggaggagatggaggggagggg
gagcgggacGTGGAGTTTGCGGCGAATTTCATCGAGAACGTTCGAAACCG
TTTCGCGGCAGATCCCGCCCGGTACCAGACCTTCCTGGAGGTGCTGCAGC
gccatgaggaggaagggaaggagggcgggctggcggagacggagcaGCTG
GCCAAGACGGTCTCGGAGCTCTTCCGGGGCCACGAGGATCTCTTGAAAGa
cttcgcgcattttttgcCGGGCCCAGTTCGGGCAGCGTTGGGGCTGatgg
ggccggaggaggacgggaagcttccggaaggggagggggggggcggcgag
ggggagggcaagaagccggcggaggagaaggaagagggcggggaggagga
gatggggatgGCCGACGCCTTCAAATTCCTCCAGCGGGTGCGTGAGAAGA
TAGGGGCGGAGAATGAGGAGAAGTACAACGAGTTCTTGGACGTGCTCCGG
GGctacgaggagaaggagatcgTCCCGGCGGAGGCGACGCGGCGGGTAGA
GGCGTTACTGGGCGGGGACACGGAGCTGTGGGAGGAATTCAAGGGATTTC
TCCCGGACGTGGggaggcgcgaggaggaggacgaggacgaggacgaggag
gatgacgaggggcaagaggaggaggaggaggaggaggggagggaggaggt
ggagtcGTTGCTGGTGAAGGTGCGTGTTTTCTTCGCAAAACGTCCCACGG
AAGGGACGCGGCTGGTGGAAGCGTTGGAGGGGGCGATGAATGtggaaggg
ggccagggaggttCAGGGTCGGAccggaagaagaaatgggagGAGACGAA
AGAGAGGGTCATGCAAGTGGCCAGGGAggtgctgaaggaggagggggagg
aaagtgggaTGCgaaaggagttggaggaatggatggcggggaaggagggg
gagaaaacgAAGGAGGTCGGGTCGGGGGACCAAGCGGGTggtgtggtgga
gggagcggttcgaggcggaggaggggaaagagcagaggccagggggaagg
aagggggaatggacgttgaaaaaggagggcaggcgggaggggaaggtggg
agggggacaggagggggaagaagagacgggaaggaggaagaggaggttgg
gaggggcgagggaggagcagggaaagggacagagaaagaaaattccccga
gggggaagaagcggaaagcaggagagggcgacgagggggaggaggaggta
gaggaggaagaggaaggggaggaagaggagcttgtgatcatggacgagga
catgacggacgacgaggaagggaaagaggaggggggagagaagaacgccg
ggaagggagcggagaaggaggaggagggaaaagagggagagctaggggga
gggaagggcgcggaggaggatgggggagaaggcgaccCGGGAATAGGGCC
CAAAGAAAGTCGCAAGAAAGAGGCTTCGGGAGGCGAGGCATCAGGGGACA
AGGTCGATccgaaggggaaagggaaaagggaggaagaaggagggcgggaa
ggagggcgggacggagggcgggaaggaggggcagaggaaacgggggagga
ggagacttccggggcggtggggacAGGGGAAGTACCCGCtctgggaaagg
aaggagggagggaagaaggaggtgaagagggCGGCGGGCCCGGTGGGGGC
CATGAAGGAAATAGTCCCGGAGCAGTGAAGCCTAGCCCGCCCACGTCCAC
TCCacgctcttctcctccctcggtcaGTCCCTCCTCGGGCCCTCGGAAAC
GGAGTTTGGCGgaggtgatggggaaggaaggggcggtggaggtgatggga
aaggaagaggcggggccagtggacggggagggccgaAGCAGCAACCACAC
GGGCCTCGGACAGGACAAGGCCTCGAGCCCCGTGCAAGGCAACCTcctga
agggaggagggagcgacgagggcgggaaggagggcgggcaggagggcggg
caggagggcgggaaggaatgcCTGTCTAGGGCGGACGCAAGTCCATCGGG
ATtgtag
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