EWM24186.1, cds6488 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24186.1 vs. NCBI_GenBank
Match: gi|585105571|gb|EWM24186.1| (paired amphipathic helix protein sin3b [Nannochloropsis gaditana]) HSP 1 Score: 2475.28 bits (6414), Expect = 0.000e+0 Identity = 1272/1272 (100.00%), Postives = 1272/1272 (100.00%), Query Frame = 0
Query: 1 MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1272
MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL
Sbjct: 1 MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1272
BLAST of EWM24186.1 vs. NCBI_GenBank
Match: gi|585105572|gb|EWM24187.1| (paired amphipathic helix protein sin3b [Nannochloropsis gaditana]) HSP 1 Score: 2321.97 bits (6016), Expect = 0.000e+0 Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 0
Query: 76 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1272
MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL
Sbjct: 1 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1197
BLAST of EWM24186.1 vs. NCBI_GenBank
Match: gi|553177672|ref|XP_005852485.1| (transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526] >gi|422296048|gb|EKU23347.1| transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0 Identity = 308/311 (99.04%), Postives = 308/311 (99.04%), Query Frame = 0
Query: 1 MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPET 311
MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNAL YLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLC QVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPE
Sbjct: 1 MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPEV 311 HSP 2 Score: 68.9366 bits (167), Expect = 2.082e-8 Identity = 63/204 (30.88%), Postives = 89/204 (43.63%), Query Frame = 0
Query: 461 PPQYRMPAPQGKAPAPAGGWEGGEEDVGEA---DALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFL-----------------------------PHGYR----MPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEF--AANFIENVRNRFAADP 626
PP Y +P AP+PA A +AL +++ V+ TF +P++Y +FL VMR + G T + +V RLF G+++LLRGF FL P GYR PS PPS PPF +PG G+G G EG GGE + DV A +++ V++ +A P
Sbjct: 123 PPSYSLPY---NAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPF-------LPG--GNGTRPPLQTGVTEG-----GGEAKEDVSMEDAVLYMDRVKSAYADKP 309 HSP 3 Score: 65.855 bits (159), Expect = 1.682e-7 Identity = 46/164 (28.05%), Postives = 80/164 (48.78%), Query Frame = 0
Query: 291 MEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLP------------------GARG----------------GGEGG--SLQGG-EEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGV 417
M++A++Y++ V+ +A +P+ YA FL +++ ++ DT + V+++FQG+D L++GF FL H + PP P G RG GG G LQ G EGGGE + + M+ A+ + D+V++ + ++P V
Sbjct: 151 MQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKED---VSMEDAVLYMDRVKSAYADKPEV 311
BLAST of EWM24186.1 vs. NCBI_GenBank
Match: gi|553193381|ref|XP_005855765.1| (transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526] >gi|422293306|gb|EKU20606.1| transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 533.872 bits (1374), Expect = 3.007e-177 Identity = 256/258 (99.22%), Postives = 256/258 (99.22%), Query Frame = 0
Query: 1 MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPP 258
MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNAL YLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLC QVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPP
Sbjct: 1 MDRQNKATGGSGLFSGNMSSGPGASGTNSPRPYQQQQQPPPPLHSRPRDMPVGAPPVYQRPSLTGAGLFTSAGGGMASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPP 258 HSP 2 Score: 63.929 bits (154), Expect = 3.839e-7 Identity = 25/73 (34.25%), Postives = 48/73 (65.75%), Query Frame = 0
Query: 291 MEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPP 363
M++A++Y++ V+ +A +P+ YA FL +++ ++ DT + V+++FQG+D L++GF FL H + PP
Sbjct: 151 MQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPP 223
BLAST of EWM24186.1 vs. NCBI_GenBank
Match: gi|553193357|ref|XP_005855759.1| (paired amphipathic helix repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293300|gb|EKU20600.1| paired amphipathic helix repeat-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 202.216 bits (513), Expect = 3.957e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query: 724 MADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVK 827
MADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVK
Sbjct: 1 MADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVK 104 HSP 2 Score: 134.42 bits (337), Expect = 1.991e-32 Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0
Query: 1195 GKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1272
G+E ++ KEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL
Sbjct: 94 GREEVESLLVKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 171 The following BLAST results are available for this feature:
BLAST of EWM24186.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|