NO17G01960, NO17G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01960 vs. NCBI_GenBank
Match: EWM24239.1 (set1 ash2 histone methyltransferase complex subunit ash2 [Nannochloropsis gaditana]) HSP 1 Score: 387.1 bits (993), Expect = 7.700e-104 Identity = 225/362 (62.15%), Postives = 260/362 (71.82%), Query Frame = 0 Query: 71 SLPLLEIPKQVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPT--ADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLPVLPEHMQETSLNGSSNPLLQGGVFPHPFLNREDSYNSASGSVATSASGGVGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEGGIEDEILRKELEALGNHVRFFKNGKDQGPAYTQIVGARYYPAASIFLTGRVRGNYGPSWICPPETSIPFSPMSAVKESLKRDELNLYNQGVNE 431 +LPL+E+PK VTFS+KE+APQL LSRDL+EVTGCRAGYRM+K SD VY+GNWYWECEILE T T D +E+ A ED PHFRVGWATKQGN+QAPVGYDKHSFGYRDV GSKIHK ERVD+YGEAYGPGD++GCMICLP+LPEHM+ET+LN N + G FP PFL RE+ V+T++ XXXXXXXXXXXXXXXXXXXXXXXXX G E ED +L++EL+ALGNH+RFFKNGKDQGPAYTQI GARYYPA S++L GRVRGN+GPS I PP+TSIPFSP++A+K LKRDEL L+NQ VNE Sbjct: 64 TLPLIEVPKHVTFSIKESAPQLFLSRDLMEVTGCRAGYRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEE---RAEEDCPHFRVGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDVVGCMICLPILPEHMRETALNVGGNSVQAPG-FPPPFLPREEV------GVSTTS-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXKGSGPDEDACEDPLLQRELDALGNHIRFFKNGKDQGPAYTQIPGARYYPAVSLYLAGRVRGNFGPSLIYPPQTSIPFSPVAALKGGLKRDELALHNQAVNE 372
BLAST of NO17G01960 vs. NCBI_GenBank
Match: CBN77514.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.6 bits (301), Expect = 1.300e-23 Identity = 71/184 (38.59%), Postives = 101/184 (54.89%), Query Frame = 0 Query: 81 VTFSVKETAPQLSL-SRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICL-PVLPEHMQETSLNGSSNPLLQGGVFPHPFLNREDSYNSASGSVATSAS 263 ++ S ++ APQL++ +D L VTG G+RM++A+ V G WYWEC +L P TT + H R+GW+ G +Q PVGYDK S+ YRD+ GSK+H S R D+YGE +GPGD+IG +I L PE + +T G+S+ + G+ S S AT+AS Sbjct: 88 ISRSAEDCAPQLTMPHKDQLTVTG-HKGFRMARATKGVSNGTWYWECAVLP--PETT-----------------EGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSHRSDNYGEPWGPGDVIGFLIRLKSPTPEEIIDTV--GASSDSGRHGMTAXXXXXXXXXXQSPSELAATAAS 249
BLAST of NO17G01960 vs. NCBI_GenBank
Match: XP_008861203.1 (hypothetical protein H310_00272 [Aphanomyces invadans] >ETW09792.1 hypothetical protein H310_00272 [Aphanomyces invadans]) HSP 1 Score: 112.8 bits (281), Expect = 2.800e-21 Identity = 84/322 (26.09%), Postives = 128/322 (39.75%), Query Frame = 0 Query: 87 ETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLPVLPEHMQETSLNGSSNPLLQGGVFPHPFLNREDSYNSASGSVATSASGGVGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEGGIEDEILRKELEALGNHVRFFKNGKDQGPAYTQIVGARYYPAASIFLTGRVRGNYGPSWICPPETSIPFSP 409 + P L L D + V+G + G+ M++ + V G +Y+E ++L P A+++ H RVGW TK+G+I APVG+D+HS+GYRD+ G HKS+R D YGE++G GDI+G +IC +N + G P P R A S++ +S V ++D +++RFF NG+DQG A+ + A Y+P SI+ G VR N+GP + C P + P Sbjct: 45 DKGPLLVLGDDGVTVSGTK-GFCMARTNVGVKKGTYYFEIKLL-------PAAEAY-------------HVRVGWGTKKGDINAPVGFDEHSYGYRDIGGETTHKSKRSDRYGESFGVGDIVGTLIC------------VNWEAGEKKAEGATPSPLPGR-----FAPSSLSKQSSDLVAVSSPRR------------------------------------------------------------------VDD----------ASYIRFFVNGRDQGMAFEGMPFAEYFPCVSIYGPGTVRANFGPDFECAPPGVVAVPP 252
BLAST of NO17G01960 vs. NCBI_GenBank
Match: GAQ81553.1 (hypothetical protein KFL_000830350 [Klebsormidium nitens]) HSP 1 Score: 112.5 bits (280), Expect = 3.700e-21 Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 0 Query: 75 LEIPKQVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLP--VLPE 220 LE+ +V S E APQ+ LS D L + + GYRM +A+ Y G WY+E +I+ + + H R+GW+ G++QAPVGYD HS+GYRDV GSK+H + R + YG YG GD++GC I LP V PE Sbjct: 108 LEVLTEVLLSRTERAPQIQLSADQLTASSTK-GYRMVRATTGPYDGAWYFEIKIVH--------------------LGETGHTRLGWSMSGGDLQAPVGYDTHSYGYRDVDGSKVHNTWR-EEYGAGYGEGDVVGCYINLPGGVRPE 232
BLAST of NO17G01960 vs. NCBI_GenBank
Match: XP_005646107.1 (hypothetical protein COCSUDRAFT_48164 [Coccomyxa subellipsoidea C-169] >EIE21563.1 hypothetical protein COCSUDRAFT_48164 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 110.9 bits (276), Expect = 1.100e-20 Identity = 59/142 (41.55%), Postives = 80/142 (56.34%), Query Frame = 0 Query: 74 LLEIPKQVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLP 216 L E K V S E A Q LS D + VT C GYRM++A+ Y G WY+E + ++G+ H R+GW+TK+G +QAPVGYD+HS YRD+ GSK+HK+ R D YG + GD+IGC + +P Sbjct: 53 LEEDGKPVQLSKLEKAQQAVLSEDGMSVT-CHKGYRMARATRGAYVGTWYFEIRV----------------THLGST----GHCRLGWSTKKGELQAPVGYDEHSMAYRDLEGSKVHKALRED-YGAPFAEGDVIGCFLHMP 172
BLAST of NO17G01960 vs. NCBI_GenBank
Match: XP_014671616.1 (PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2-like [Priapulus caudatus]) HSP 1 Score: 110.5 bits (275), Expect = 1.400e-20 Identity = 85/331 (25.68%), Postives = 124/331 (37.46%), Query Frame = 0 Query: 80 QVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLPVLPEHMQETSLNGSSNPLLQGGVFPHPFLNREDSYNSASGSVATSASGGVGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEGGIEDEILRKELEALGNHVRFFKNGKDQGPAYTQIVGARYYPAASIFLTGRVRGNYGPSWICPPETSIPFSPMS 411 +V + + A QL LS D + VTG GY + +AS V +G WY+E + + P T RVGWA N+QAP GYDK S+ +R +G++ H S R HY AYG GD++GC I LP L + PL++ F + +L ED + ++L+ A G+ V F+KNG+ QG A+ + YYPA S++ V N+GPS+ CPP + + P+S Sbjct: 93 RVILAPNDRAAQLKLSDDRMTVTG-EKGYCLIRASHCVRSGGWYYEFTVDDMPPETA--------------------CRVGWAQAYENLQAPCGYDKFSYSWRSRKGTRFHNS-RGRHYSAAYGEGDVLGCYIYLPELRDPSALVPDTVKDKPLVK---FKN-YLYYEDQLET----------------------------------------------------------------------------------------QQVLKSLRPARGSRVVFYKNGRCQGTAFVDVHAGCYYPAVSLYRGCTVTVNFGPSFRCPPRDGVRYRPVS 309
BLAST of NO17G01960 vs. NCBI_GenBank
Match: XP_022799463.1 (set1/Ash2 histone methyltransferase complex subunit ASH2-like isoform X2 [Stylophora pistillata]) HSP 1 Score: 109.4 bits (272), Expect = 3.100e-20 Identity = 92/349 (26.36%), Postives = 131/349 (37.54%), Query Frame = 0 Query: 75 LEIPKQVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLPVLPEHMQETSLNGSSNPLLQGGVFPHPFLNREDSYNSASGSVATSASGGVGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEGGIEDEILRKELEAL-GNHVRFFKNGKDQGPAYTQIVGARYYPAASIFLTGRVRGNYGPSWICPPETSIPFSPMS------AVKESL 417 +++ K+V S+ + APQL LS D L VTG GY M +A+ V GNWY+E + +P T T R+GW+ GN+QAP+GYDK S+ +R +G+K H+S R HY Y GD+IG I LP H L + H + +D + A K L+ + G+ V+F+KNG QG A+ +I YYPA S++ + N+GP + PP T F PMS AV++SL Sbjct: 192 IKLHKEVLLSMNDRAPQLKLSDDRLSVTG-EKGYCMLRATHGVSKGNWYFEATV--DIPPDTAT-------------------RIGWSQLYGNLQAPLGYDKFSYSWRSKKGTKFHES-RGKHYSNGYATGDVIGFFISLPQNDRH-PAGFLPATYKDKALIKFKSHLYFEEKDHVDKA-------------------------------------------------------------------------------------------EKNLKPVPGSQVKFYKNGVCQGVAWQEIYDGTYYPAVSLYKNATITINFGPDFKYPP-TDEDFQPMSYKAMEFAVEQSL 424
BLAST of NO17G01960 vs. NCBI_GenBank
Match: XP_013384371.1 (set1/Ash2 histone methyltransferase complex subunit ASH2 [Lingula anatina]) HSP 1 Score: 108.6 bits (270), Expect = 5.300e-20 Identity = 85/335 (25.37%), Postives = 123/335 (36.72%), Query Frame = 0 Query: 80 QVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLPVLPEHMQETSLNGSSNPLLQGGVFPHPFLNREDSYNSASGSVATSASGGVGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEGGIEDEILRKELEALGNHVRFFKNGKDQGPAYTQIVGARYYPAASIFLTGRVRGNYGPSWICPPETSIPFSPMSAVKE 415 QV ++ + APQL +S D L VTG GY M +A+ V G WY+E +I E P T R+GW+ GN+QAP GYDK S+ +R +G++ H+S R HY E YG GD++G I LP + + PL++ H + +D+ ++ A+G+ + FKNG QG A+T I A YYP S++ V N+GP + PP+ F P+SA E Sbjct: 314 QVLLALHDRAPQLKISDDRLTVTG-EKGYSMVRATHCVNKGGWYFEVKIDEMPPETA--------------------VRMGWSMTLGNLQAPCGYDKFSYSWRSKKGTRFHES-RGKHYSEGYGEGDVVGFYIYLPWPTKPGKLLPATYKDRPLVK--FKSHLYYEEKDNVQDTEKNLK------------------------------------------------------------------------------------------PAVGSKLIMFKNGISQGVAWTDIHEASYYPCISLYKNATVTLNFGPDFKYPPKDLENFQPISAAAE 534
BLAST of NO17G01960 vs. NCBI_GenBank
Match: KYK59571.1 (COMPASS complex protein [Drechmeria coniospora] >ODA76739.1 hypothetical protein RJ55_08010 [Drechmeria coniospora]) HSP 1 Score: 108.6 bits (270), Expect = 5.300e-20 Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = 0 Query: 84 SVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHY--GEAYGPGDIIGCMICLPVLPEHMQETSLNGSSNPLLQGGVFPHP 243 S ++ AP + ++T + G+RM +A+ +V G WYWEC+I + +P +D G H R+GWA ++ ++ APVG+D +S+G RDV G K+H S D + G+ GD+IG I LP EH+Q L G+ +P++ HP Sbjct: 188 SFEDVAPSVYFDSSARQITTDK-GFRMGRANVAVRQGRWYWECKITQGVPPV--------KDGAGGETGRGQHVRLGWARREASLDAPVGFDAYSYGIRDVAGEKVHMSRPTDFFPPGDGIREGDVIGLEIQLP--SEHLQRKVLEGNYSPIVDAADDEHP 337
BLAST of NO17G01960 vs. NCBI_GenBank
Match: XP_022120577.1 (set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2 [Pieris rapae]) HSP 1 Score: 107.1 bits (266), Expect = 1.500e-19 Identity = 85/338 (25.15%), Postives = 128/338 (37.87%), Query Frame = 0 Query: 78 PKQVTFSVKETAPQLSLSRDLLEVTGCRAGYRMSKASDSVYAGNWYWECEILETLPTTTPTADSHNEDYIGAAVEDQPHFRVGWATKQGNIQAPVGYDKHSFGYRDVRGSKIHKSERVDHYGEAYGPGDIIGCMICLPVLPEHMQETSLNG-SSNPLLQGGVFPHPFLNREDSYNSASGSVATSASGGVGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEGGIEDEILRKELEALGNHVRFFKNGKDQGPAYTQIVGARYYPAASIFLTGRVRGNYGPSWICPPETSIPFSPMSAVKE 415 P V ++ + APQL ++ D L VTG + GY M +A+ V G WYWE + E +P GAA RVGW + N+QAP+GYDK + +R +G++ H+S R HY +YG GD +G +I LP H + + N PL++ H + +D+ + ++ A G+ + FFKNG+ QG A+ + YYP+ S+ V N+GP++ CPP T + PMS E Sbjct: 96 PGVVLLALHDRAPQLKIAEDRLAVTGDK-GYCMVRATHGVSRGIWYWEATV-EEMPE-------------GAAA------RVGWGRRYANLQAPLGYDKFGYSWRSRKGTRFHES-RGKHYSNSYGEGDTLGFLIVLP--ESHSTKYTPNTYKDRPLVK--FKSHLYYEDKDNIQESLSNLKALA------------------------------------------------------------------------------------------GSRIFFFKNGECQGEAFADVFQGCYYPSVSLHKNCTVSVNFGPNFKCPPNTEQSYRPMSEKAE 317 The following BLAST results are available for this feature:
BLAST of NO17G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01960 ID=NO17G01960|Name=NO17G01960|organism=Nannochloropsis oceanica|type=gene|length=1753bpback to top protein sequence of NO17G01960.1 >NO17G01960.1-protein ID=NO17G01960.1-protein|Name=NO17G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bpback to top Synonyms
Publications
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