Naga_100020g4, gene6254 (gene) Nannochloropsis gaditana

Overview
NameNaga_100020g4
Unique Namegene6254
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:584336..585943 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100020g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:584336..585943 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01960NO17G01960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6472rna6472-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6472rna6472Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6472

>rna6472-protein ID=rna6472-protein|Name=rna6472|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MSKRSSAADTLSPSFLTSAALELVSPTDASPQGNVSGSHAPSKRTRSTVA
TAAATASAPPGGKTLPLIEVPKHVTFSIKESAPQLFLSRDLMEVTGCRAG
YRMAKGSDCVYSGNWYWECEILEDARTVTAATGGDRQSEERAEEDCPHFR
VGWATKQGNLQAPVGYDKHSFGYRDVAGSKIHKCERVDYYGEAYGPGDVV
GCMICLPILPEHMRETALNVGGNSVQAPGFPPPFLPREEVGVSTTSVVGG
VGVIGVAGVAGSASYGRQGGRKGSGPDEDACEDPLLQRELDALGNHIRFF
KNGKDQGPAYTQIPGARYYPAVSLYLAGRVRGNFGPSLIYPPQTSIPFSP
VAALKGGLKRDELALHNQAVNERRAALAARRQRQEATEQQEGGRLVGERH
QQVVGVKEVREEAGNTDERGGEEREGGPAGRVAGHNS
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Synonyms
Publications